RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 PDE4CQ08493 712 aa3.97□□□□□ -1.77
RNU2-54P-201ENST00000410299 SGO2Q562F6 1265 aa3.97□□□□□ -1.77
RNU2-54P-201ENST00000410299 ZDHHC13Q8IUH4 622 aa3.97□□□□□ -1.77
RNU2-54P-201ENST00000410299 SMG8Q8ND04 991 aaKnown RBP3.97□□□□□ -1.77
RNU2-54P-201ENST00000410299 CCDC74AQ96AQ1 378 aa3.97□□□□□ -1.77
RNU2-54P-201ENST00000410299 CITED4Q96RK1 184 aa3.97□□□□□ -1.77
RNU2-54P-201ENST00000410299 FAM83CQ9BQN1 747 aa3.97□□□□□ -1.77
RNU2-54P-201ENST00000410299 EHD4Q9H223 541 aa3.97□□□□□ -1.77
RNU2-54P-201ENST00000410299 CYP4F12Q9HCS2 524 aa3.97□□□□□ -1.77
RNU2-54P-201ENST00000410299 GADD45BO75293 160 aaPredicted RBP3.96□□□□□ -1.78
RNU2-54P-201ENST00000410299 ECEL1O95672 775 aa3.96□□□□□ -1.78
RNU2-54P-201ENST00000410299 MAP4P27816 1152 aaKnown RBP3.96□□□□□ -1.78
RNU2-54P-201ENST00000410299 RXRBP28702 533 aa3.96□□□□□ -1.78
RNU2-54P-201ENST00000410299 TXKP42681 527 aa3.96□□□□□ -1.78
RNU2-54P-201ENST00000410299 CD97P48960 835 aa3.96□□□□□ -1.78
RNU2-54P-201ENST00000410299 EXOSC6Q5RKV6 272 aaKnown RBP3.96□□□□□ -1.78
RNU2-54P-201ENST00000410299 EPS8L3Q8TE67 593 aaKnown RBP3.96□□□□□ -1.78
RNU2-54P-201ENST00000410299 FBLIM1Q8WUP2 373 aa3.96□□□□□ -1.78
RNU2-54P-201ENST00000410299 MFSD14AQ96MC6 490 aa3.96□□□□□ -1.78
RNU2-54P-201ENST00000410299 DBNDD2Q9BQY9 259 aa3.96□□□□□ -1.78
RNU2-54P-201ENST00000410299 TRIM56Q9BRZ2 755 aaKnown RBP3.96□□□□□ -1.78
RNU2-54P-201ENST00000410299 KRTAP4-7Q9BYR0 210 aa3.96□□□□□ -1.78
RNU2-54P-201ENST00000410299 SUGCTQ9HAC7 445 aa3.96□□□□□ -1.78
RNU2-54P-201ENST00000410299 BIN2Q9UBW5 565 aaPredicted RBP3.96□□□□□ -1.78
RNU2-54P-201ENST00000410299 PRR19A6NJB7 356 aa3.95□□□□□ -1.78
RNU2-54P-201ENST00000410299 WDR64B1ANS9 1081 aa3.95□□□□□ -1.78
RNU2-54P-201ENST00000410299 B3GALT4O96024 378 aa3.95□□□□□ -1.78
RNU2-54P-201ENST00000410299 CYP11A1P05108 521 aa3.95□□□□□ -1.78
RNU2-54P-201ENST00000410299 ITPKAP23677 461 aa3.95□□□□□ -1.78
RNU2-54P-201ENST00000410299 USP11P51784 963 aa3.95□□□□□ -1.78
RNU2-54P-201ENST00000410299 SOX4Q06945 474 aaPredicted RBP3.95□□□□□ -1.78
RNU2-54P-201ENST00000410299 POU4F3Q15319 338 aa3.95□□□□□ -1.78
RNU2-54P-201ENST00000410299 CDPF1Q6NVV7 123 aa3.95□□□□□ -1.78
RNU2-54P-201ENST00000410299 PI16Q6UXB8 463 aa3.95□□□□□ -1.78
RNU2-54P-201ENST00000410299 TMC7Q7Z402 723 aa3.95□□□□□ -1.78
RNU2-54P-201ENST00000410299 SHISA5Q8N114 240 aa3.95□□□□□ -1.78
RNU2-54P-201ENST00000410299 C2CD4AQ8NCU7 369 aaPredicted RBP3.95□□□□□ -1.78
RNU2-54P-201ENST00000410299 SHKBP1Q8TBC3 707 aa3.95□□□□□ -1.78
RNU2-54P-201ENST00000410299 DMRTB1Q96MA1 342 aa3.95□□□□□ -1.78
RNU2-54P-201ENST00000410299 CSRNP1Q96S65 589 aa3.95□□□□□ -1.78
RNU2-54P-201ENST00000410299 RBCK1Q9BYM8 510 aa3.95□□□□□ -1.78
RNU2-54P-201ENST00000410299 DNAJC25Q9H1X3 360 aa3.95□□□□□ -1.78
RNU2-54P-201ENST00000410299 ZNF576Q9H609 170 aa3.95□□□□□ -1.78
RNU2-54P-201ENST00000410299 ABCB6Q9NP58 842 aa3.95□□□□□ -1.78
RNU2-54P-201ENST00000410299 GNEQ9Y223 722 aaKnown RBP3.95□□□□□ -1.78
RNU2-54P-201ENST00000410299 HIF3AQ9Y2N7 669 aa3.95□□□□□ -1.78
RNU2-54P-201ENST00000410299 TMEM238LA0A1B0GVL6 79 aa3.94□□□□□ -1.78
RNU2-54P-201ENST00000410299 BRD1O95696 1058 aa3.94□□□□□ -1.78
RNU2-54P-201ENST00000410299 ADH5P11766 374 aa3.94□□□□□ -1.78
RNU2-54P-201ENST00000410299 ZNF157P51786 506 aaPredicted RBP3.94□□□□□ -1.78
RNU2-54P-201ENST00000410299 GRM2Q14416 872 aa3.94□□□□□ -1.78
RNU2-54P-201ENST00000410299 NFKBIBQ15653 356 aa3.94□□□□□ -1.78
RNU2-54P-201ENST00000410299 AKAP4Q5JQC9 854 aa3.94□□□□□ -1.78
RNU2-54P-201ENST00000410299 LCE1DQ5T752 114 aa3.94□□□□□ -1.78
RNU2-54P-201ENST00000410299 MCTP1Q6DN14 999 aa3.94□□□□□ -1.78
RNU2-54P-201ENST00000410299 FBXL6Q8N531 539 aa3.94□□□□□ -1.78
RNU2-54P-201ENST00000410299 GLIS3Q8NEA6 775 aa3.94□□□□□ -1.78
RNU2-54P-201ENST00000410299 FAM95CA0A1B0GW59 222 aa3.93□□□□□ -1.78
RNU2-54P-201ENST00000410299 KIAA1324LA8MWY0 1029 aaPredicted RBP3.93□□□□□ -1.78
RNU2-54P-201ENST00000410299 EIF4EBP3O60516 100 aaPredicted RBP3.93□□□□□ -1.78
RNU2-54P-201ENST00000410299 ADAMTS4O75173 837 aa3.93□□□□□ -1.78
RNU2-54P-201ENST00000410299 F13BP05160 661 aa3.93□□□□□ -1.78
RNU2-54P-201ENST00000410299 FAAP100Q0VG06 881 aa3.93□□□□□ -1.78
RNU2-54P-201ENST00000410299 PRPF40BQ6NWY9 871 aaKnown RBP3.93□□□□□ -1.78
RNU2-54P-201ENST00000410299 DYMQ7RTS9 669 aa3.93□□□□□ -1.78
RNU2-54P-201ENST00000410299 DDX54Q8TDD1 881 aaKnown RBP3.93□□□□□ -1.78
RNU2-54P-201ENST00000410299 ALKBH8Q96BT7 664 aaKnown RBP3.93□□□□□ -1.78
RNU2-54P-201ENST00000410299 CORO1BQ9BR76 489 aa3.93□□□□□ -1.78
RNU2-54P-201ENST00000410299 RAD18Q9NS91 495 aa3.93□□□□□ -1.78
RNU2-54P-201ENST00000410299 DCTN4Q9UJW0 460 aa3.93□□□□□ -1.78
RNU2-54P-201ENST00000410299 ACTL7BQ9Y614 415 aa3.93□□□□□ -1.78
RNU2-54P-201ENST00000410299 NFICP08651 508 aa3.92□□□□□ -1.78
RNU2-54P-201ENST00000410299 RAB6AP20340 208 aa3.92□□□□□ -1.78
RNU2-54P-201ENST00000410299 MAPK1P28482 360 aa3.92□□□□□ -1.78
RNU2-54P-201ENST00000410299 HOXA10P31260 410 aaPredicted RBP3.92□□□□□ -1.78
RNU2-54P-201ENST00000410299 ADMP35318 185 aa3.92□□□□□ -1.78
RNU2-54P-201ENST00000410299 GRIK1P39086 918 aa3.92□□□□□ -1.78
RNU2-54P-201ENST00000410299 FCGRTP55899 365 aa3.92□□□□□ -1.78
RNU2-54P-201ENST00000410299 PTPN12Q05209 780 aaKnown RBP3.92□□□□□ -1.78
RNU2-54P-201ENST00000410299 PDE3AQ14432 1141 aa3.92□□□□□ -1.78
RNU2-54P-201ENST00000410299 DSC3Q14574 896 aa3.92□□□□□ -1.78
RNU2-54P-201ENST00000410299 INTS5Q6P9B9 1019 aaKnown RBP3.92□□□□□ -1.78
RNU2-54P-201ENST00000410299 PAOXQ6QHF9 649 aa3.92□□□□□ -1.78
RNU2-54P-201ENST00000410299 ZC3H12CQ9C0D7 883 aaKnown RBP3.92□□□□□ -1.78
RNU2-54P-201ENST00000410299 NLRP2Q9NX02 1062 aa3.92□□□□□ -1.78
RNU2-54P-201ENST00000410299 TRAK1Q9UPV9 953 aa3.92□□□□□ -1.78
RNU2-54P-201ENST00000410299 PNMA6FA0A0J9YX94 578 aa3.91□□□□□ -1.78
RNU2-54P-201ENST00000410299 TREHO43280 583 aa3.91□□□□□ -1.78
RNU2-54P-201ENST00000410299 AOC2O75106 756 aa3.91□□□□□ -1.78
RNU2-54P-201ENST00000410299 LIG1P18858 919 aa3.91□□□□□ -1.78
RNU2-54P-201ENST00000410299 SPINK2P20155 84 aa3.91□□□□□ -1.78
RNU2-54P-201ENST00000410299 PLCB3Q01970 1234 aa3.91□□□□□ -1.78
RNU2-54P-201ENST00000410299 AP3B2Q13367 1082 aa3.91□□□□□ -1.78
RNU2-54P-201ENST00000410299 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.91□□□□□ -1.78
RNU2-54P-201ENST00000410299 RPS26P11Q5JNZ5 115 aaPredicted RBP3.91□□□□□ -1.78
RNU2-54P-201ENST00000410299 NXPE4Q6UWF7 544 aa3.91□□□□□ -1.78
RNU2-54P-201ENST00000410299 DTHD1Q6ZMT9 781 aa3.91□□□□□ -1.78
RNU2-54P-201ENST00000410299 EZH1Q92800 747 aaPredicted RBP3.91□□□□□ -1.78
RNU2-54P-201ENST00000410299 WDR89Q96FK6 387 aaPredicted RBP3.91□□□□□ -1.78
RNU2-54P-201ENST00000410299 WDR18Q9BV38 432 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms