RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 GOLGA8BA8MQT2 603 aa17.84■□□□□ 0.45
SCAMP4-202ENST00000409472 UQCRFS1P1P0C7P4 283 aa17.84■□□□□ 0.45
SCAMP4-202ENST00000409472 ADD1P35611 737 aaKnown RBP17.84■□□□□ 0.45
SCAMP4-202ENST00000409472 ZNF274Q96GC6 653 aaPredicted RBP17.84■□□□□ 0.45
SCAMP4-202ENST00000409472 NGLY1Q96IV0 654 aa17.84■□□□□ 0.45
SCAMP4-202ENST00000409472 TACC3Q9Y6A5 838 aa17.84■□□□□ 0.45
SCAMP4-202ENST00000409472 C4AP0C0L4 1744 aa17.84■□□□□ 0.45
SCAMP4-202ENST00000409472 C4BP0C0L5 1744 aa17.84■□□□□ 0.45
SCAMP4-202ENST00000409472 NEDD4P46934 1319 aa17.84■□□□□ 0.45
SCAMP4-202ENST00000409472 SCN7AQ01118 1682 aa17.84■□□□□ 0.45
SCAMP4-202ENST00000409472 MCM5P33992 734 aa17.84■□□□□ 0.45
SCAMP4-202ENST00000409472 EVCP57679 992 aa17.84■□□□□ 0.45
SCAMP4-202ENST00000409472 PDE4CQ08493 712 aa17.84■□□□□ 0.45
SCAMP4-202ENST00000409472 ZSCAN25Q6NSZ9 544 aa17.84■□□□□ 0.45
SCAMP4-202ENST00000409472 NCOA7Q8NI08 942 aa17.84■□□□□ 0.45
SCAMP4-202ENST00000409472 STRBPQ96SI9 672 aaKnown RBP17.84■□□□□ 0.45
SCAMP4-202ENST00000409472 ARMT1Q9H993 441 aa17.84■□□□□ 0.45
SCAMP4-202ENST00000409472 COL1A1P02452 1464 aaPredicted RBP17.84■□□□□ 0.45
SCAMP4-202ENST00000409472 TOM1O60784 492 aa17.83■□□□□ 0.45
SCAMP4-202ENST00000409472 MBD4O95243 580 aa17.83■□□□□ 0.45
SCAMP4-202ENST00000409472 RALYLQ86SE5 291 aaKnown RBP17.83■□□□□ 0.45
SCAMP4-202ENST00000409472 SMARCC1Q92922 1105 aaPredicted RBP17.83■□□□□ 0.45
SCAMP4-202ENST00000409472 BCL2L12Q9HB09 334 aa17.83■□□□□ 0.45
SCAMP4-202ENST00000409472 SRP68Q9UHB9 627 aaKnown RBP17.83■□□□□ 0.45
SCAMP4-202ENST00000409472 BTAF1O14981 1849 aa17.83■□□□□ 0.45
SCAMP4-202ENST00000409472 PRKAB2O43741 272 aa17.83■□□□□ 0.44
SCAMP4-202ENST00000409472 OFD1O75665 1012 aa17.83■□□□□ 0.44
SCAMP4-202ENST00000409472 RXRAP19793 462 aa17.83■□□□□ 0.44
SCAMP4-202ENST00000409472 IGHMBP2P38935 993 aaKnown RBP17.83■□□□□ 0.44
SCAMP4-202ENST00000409472 CCDC24Q8N4L8 307 aa17.83■□□□□ 0.44
SCAMP4-202ENST00000409472 SCAND2PQ9GZW5 306 aaPredicted RBP17.83■□□□□ 0.44
SCAMP4-202ENST00000409472 DACT1Q9NYF0 836 aa17.83■□□□□ 0.44
SCAMP4-202ENST00000409472 RTL9Q8NET4 1388 aa17.83■□□□□ 0.44
SCAMP4-202ENST00000409472 TBC1D9BQ66K14 1250 aa17.82■□□□□ 0.44
SCAMP4-202ENST00000409472 FBXL16Q8N461 479 aa17.82■□□□□ 0.44
SCAMP4-202ENST00000409472 AIDAQ96BJ3 306 aa17.82■□□□□ 0.44
SCAMP4-202ENST00000409472 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.82■□□□□ 0.44
SCAMP4-202ENST00000409472 USP25Q9UHP3 1055 aa17.82■□□□□ 0.44
SCAMP4-202ENST00000409472 CHD4Q14839 1912 aa17.82■□□□□ 0.44
SCAMP4-202ENST00000409472 B4E1Z4 1266 aa17.82■□□□□ 0.44
SCAMP4-202ENST00000409472 PDIA4P13667 645 aaKnown RBP17.82■□□□□ 0.44
SCAMP4-202ENST00000409472 HMGN5P82970 282 aaKnown RBP17.82■□□□□ 0.44
SCAMP4-202ENST00000409472 NAA16Q6N069 864 aaPredicted RBP17.82■□□□□ 0.44
SCAMP4-202ENST00000409472 MPNDQ8N594 471 aa17.82■□□□□ 0.44
SCAMP4-202ENST00000409472 ZNF831Q5JPB2 1677 aa17.82■□□□□ 0.44
SCAMP4-202ENST00000409472 UBAP1LF5GYI3 381 aa17.81■□□□□ 0.44
SCAMP4-202ENST00000409472 NR1I2O75469 434 aa17.81■□□□□ 0.44
SCAMP4-202ENST00000409472 VPS72Q15906 364 aa17.81■□□□□ 0.44
SCAMP4-202ENST00000409472 ADGRA1Q86SQ6 560 aa17.81■□□□□ 0.44
SCAMP4-202ENST00000409472 SLC51AQ86UW1 340 aa17.81■□□□□ 0.44
SCAMP4-202ENST00000409472 LCORLQ8N3X6 602 aa17.81■□□□□ 0.44
SCAMP4-202ENST00000409472 CERKQ8TCT0 537 aa17.81■□□□□ 0.44
SCAMP4-202ENST00000409472 GYG1P46976 350 aa17.81■□□□□ 0.44
SCAMP4-202ENST00000409472 CTDSPL2Q05D32 466 aa17.81■□□□□ 0.44
SCAMP4-202ENST00000409472 CKAP2LQ8IYA6 745 aa17.81■□□□□ 0.44
SCAMP4-202ENST00000409472 MIGA1Q8NAN2 632 aa17.81■□□□□ 0.44
SCAMP4-202ENST00000409472 USP28Q96RU2 1077 aa17.81■□□□□ 0.44
SCAMP4-202ENST00000409472 ECM29Q5VYK3 1845 aa17.8■□□□□ 0.44
SCAMP4-202ENST00000409472 ZNF652Q9Y2D9 606 aa17.8■□□□□ 0.44
SCAMP4-202ENST00000409472 STK11IPQ8N1F8 1099 aa17.8■□□□□ 0.44
SCAMP4-202ENST00000409472 CELF1Q92879 486 aaKnown RBP17.8■□□□□ 0.44
SCAMP4-202ENST00000409472 NUP62CLQ9H1M0 184 aa17.8■□□□□ 0.44
SCAMP4-202ENST00000409472 SMIM22K7EJ46 135 aa17.79■□□□□ 0.44
SCAMP4-202ENST00000409472 KLRK1P26718 216 aa17.79■□□□□ 0.44
SCAMP4-202ENST00000409472 ZSCAN30Q86W11 494 aa17.79■□□□□ 0.44
SCAMP4-202ENST00000409472 AIFM3Q96NN9 605 aa17.79■□□□□ 0.44
SCAMP4-202ENST00000409472 ZSCAN16Q9H4T2 348 aaPredicted RBP17.79■□□□□ 0.44
SCAMP4-202ENST00000409472 TAOK2Q9UL54 1235 aa17.79■□□□□ 0.44
SCAMP4-202ENST00000409472 AP5Z1O43299 807 aa17.79■□□□□ 0.44
SCAMP4-202ENST00000409472 MAP3K12Q12852 859 aa17.79■□□□□ 0.44
SCAMP4-202ENST00000409472 CCDC144CPQ8IYA2 1237 aa17.79■□□□□ 0.44
SCAMP4-202ENST00000409472 IFNL3Q8IZI9 196 aa17.79■□□□□ 0.44
SCAMP4-202ENST00000409472 BICD2Q8TD16 824 aa17.79■□□□□ 0.44
SCAMP4-202ENST00000409472 MYL10Q9BUA6 226 aa17.79■□□□□ 0.44
SCAMP4-202ENST00000409472 GSG1L2A8MUP6 293 aa17.78■□□□□ 0.44
SCAMP4-202ENST00000409472 SH2B2O14492 632 aaPredicted RBP17.78■□□□□ 0.44
SCAMP4-202ENST00000409472 CNTNAP4Q9C0A0 1308 aa17.78■□□□□ 0.44
SCAMP4-202ENST00000409472 GOLGA6L4A6NEF3 574 aa17.77■□□□□ 0.44
SCAMP4-202ENST00000409472 UBE2Q2LH0YL09 131 aa17.77■□□□□ 0.44
SCAMP4-202ENST00000409472 KDM4AO75164 1064 aa17.77■□□□□ 0.44
SCAMP4-202ENST00000409472 LETM1O95202 739 aaPredicted RBP17.77■□□□□ 0.44
SCAMP4-202ENST00000409472 MSNP26038 577 aaKnown RBP17.77■□□□□ 0.44
SCAMP4-202ENST00000409472 CLEC4GQ6UXB4 293 aa17.77■□□□□ 0.44
SCAMP4-202ENST00000409472 TIAM2Q8IVF5 1701 aa17.77■□□□□ 0.44
SCAMP4-202ENST00000409472 GOLPH3LQ9H4A5 285 aa17.77■□□□□ 0.44
SCAMP4-202ENST00000409472 ANGEL1Q9UNK9 670 aaKnown RBP17.77■□□□□ 0.44
SCAMP4-202ENST00000409472 THSD7AQ9UPZ6 1657 aa17.77■□□□□ 0.43
SCAMP4-202ENST00000409472 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.76■□□□□ 0.43
SCAMP4-202ENST00000409472 GNPATO15228 680 aa17.76■□□□□ 0.43
SCAMP4-202ENST00000409472 CDC27P30260 824 aa17.76■□□□□ 0.43
SCAMP4-202ENST00000409472 TRDNQ13061 729 aa17.76■□□□□ 0.43
SCAMP4-202ENST00000409472 NAPBQ9H115 298 aa17.76■□□□□ 0.43
SCAMP4-202ENST00000409472 ORC3Q9UBD5 711 aaPredicted RBP17.76■□□□□ 0.43
SCAMP4-202ENST00000409472 MRVI1Q9Y6F6 885 aa17.76■□□□□ 0.43
SCAMP4-202ENST00000409472 COL24A1Q17RW2 1714 aa17.76■□□□□ 0.43
SCAMP4-202ENST00000409472 KIF28PB7ZC32 967 aa17.76■□□□□ 0.43
SCAMP4-202ENST00000409472 MAP3K11Q16584 847 aa17.76■□□□□ 0.43
SCAMP4-202ENST00000409472 MICU3Q86XE3 530 aa17.76■□□□□ 0.43
SCAMP4-202ENST00000409472 ANKRD18AQ8IVF6 992 aa17.76■□□□□ 0.43
SCAMP4-202ENST00000409472 CDC5LQ99459 802 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms