RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 NPHP1O15259 732 aa17.88■□□□□ 0.45
LIMK2-204ENST00000406516 GTF2E1P29083 439 aaPredicted RBP17.88■□□□□ 0.45
LIMK2-204ENST00000406516 CNBD1Q8NA66 436 aa17.88■□□□□ 0.45
LIMK2-204ENST00000406516 ZNF594Q96JF6 807 aaPredicted RBP17.88■□□□□ 0.45
LIMK2-204ENST00000406516 A0A0G2JLW4 131 aa17.88■□□□□ 0.45
LIMK2-204ENST00000406516 APOBRQ0VD83 1088 aa17.88■□□□□ 0.45
LIMK2-204ENST00000406516 ZBTB38Q8NAP3 1195 aaPredicted RBP17.88■□□□□ 0.45
LIMK2-204ENST00000406516 CBX8Q9HC52 389 aa17.88■□□□□ 0.45
LIMK2-204ENST00000406516 PYCARDQ9ULZ3 195 aa17.88■□□□□ 0.45
LIMK2-204ENST00000406516 PPFIA3O75145 1194 aa17.87■□□□□ 0.45
LIMK2-204ENST00000406516 LRRC24Q50LG9 513 aa17.87■□□□□ 0.45
LIMK2-204ENST00000406516 DHX32Q7L7V1 743 aaKnown RBP17.87■□□□□ 0.45
LIMK2-204ENST00000406516 NAP1L2Q9ULW6 460 aaPredicted RBP17.87■□□□□ 0.45
LIMK2-204ENST00000406516 SPTLC3Q9NUV7 552 aa17.87■□□□□ 0.45
LIMK2-204ENST00000406516 GOLGA6L6A8MZA4 724 aa17.86■□□□□ 0.45
LIMK2-204ENST00000406516 PFKFB2O60825 505 aa17.86■□□□□ 0.45
LIMK2-204ENST00000406516 PCCAP05165 728 aaPredicted RBP17.86■□□□□ 0.45
LIMK2-204ENST00000406516 NYXQ9GZU5 481 aa17.86■□□□□ 0.45
LIMK2-204ENST00000406516 ABCC12Q96J65 1359 aa17.86■□□□□ 0.45
LIMK2-204ENST00000406516 HMGB1P09429 215 aaKnown RBP17.86■□□□□ 0.45
LIMK2-204ENST00000406516 CCT2P78371 535 aaKnown RBP17.86■□□□□ 0.45
LIMK2-204ENST00000406516 NSUN7Q8NE18 718 aaKnown RBP17.86■□□□□ 0.45
LIMK2-204ENST00000406516 MYRIPQ8NFW9 859 aa17.86■□□□□ 0.45
LIMK2-204ENST00000406516 SMARCC2Q8TAQ2 1214 aa17.86■□□□□ 0.45
LIMK2-204ENST00000406516 ZSCAN16Q9H4T2 348 aaPredicted RBP17.86■□□□□ 0.45
LIMK2-204ENST00000406516 HELLSQ9NRZ9 838 aa17.86■□□□□ 0.45
LIMK2-204ENST00000406516 ANKRD36CQ5JPF3 1778 aa17.86■□□□□ 0.45
LIMK2-204ENST00000406516 IL15P40933 162 aaPredicted RBP17.85■□□□□ 0.45
LIMK2-204ENST00000406516 FTOQ9C0B1 505 aaKnown RBP eCLIP17.85■□□□□ 0.45
LIMK2-204ENST00000406516 PTPDC1A2A3K4 754 aa17.85■□□□□ 0.45
LIMK2-204ENST00000406516 IFIT1P09914 478 aaKnown RBP17.85■□□□□ 0.45
LIMK2-204ENST00000406516 ZMYM1Q5SVZ6 1142 aa17.85■□□□□ 0.45
LIMK2-204ENST00000406516 RBM43Q6ZSC3 357 aaKnown RBP17.85■□□□□ 0.45
LIMK2-204ENST00000406516 CHST3Q7LGC8 479 aa17.85■□□□□ 0.45
LIMK2-204ENST00000406516 KIAA1524Q8TCG1 905 aa17.85■□□□□ 0.45
LIMK2-204ENST00000406516 NCOA5Q9HCD5 579 aaKnown RBP17.85■□□□□ 0.45
LIMK2-204ENST00000406516 PPP1R1BQ9UD71 204 aaPredicted RBP17.85■□□□□ 0.45
LIMK2-204ENST00000406516 CFAP45Q9UL16 551 aa17.85■□□□□ 0.45
LIMK2-204ENST00000406516 CTDNEP1O95476 244 aa17.85■□□□□ 0.45
LIMK2-204ENST00000406516 HSPD1P10809 573 aaKnown RBP17.85■□□□□ 0.45
LIMK2-204ENST00000406516 PTGS1P23219 599 aa17.85■□□□□ 0.45
LIMK2-204ENST00000406516 C3orf67Q6ZVT6 689 aa17.85■□□□□ 0.45
LIMK2-204ENST00000406516 DSCC1Q9BVC3 393 aa17.85■□□□□ 0.45
LIMK2-204ENST00000406516 DNAJC25Q9H1X3 360 aa17.85■□□□□ 0.45
LIMK2-204ENST00000406516 GOLGB1Q14789 3259 aaKnown RBP17.84■□□□□ 0.45
LIMK2-204ENST00000406516 MAST3O60307 1309 aa17.84■□□□□ 0.45
LIMK2-204ENST00000406516 A0A1B0GUL7 405 aa17.84■□□□□ 0.45
LIMK2-204ENST00000406516 EYA2O00167 538 aa17.84■□□□□ 0.45
LIMK2-204ENST00000406516 IRS4O14654 1257 aaPredicted RBP17.84■□□□□ 0.45
LIMK2-204ENST00000406516 TPM3P06753 285 aa17.84■□□□□ 0.45
LIMK2-204ENST00000406516 TSC1Q92574 1164 aa17.84■□□□□ 0.45
LIMK2-204ENST00000406516 PRIMPOLQ96LW4 560 aa17.84■□□□□ 0.45
LIMK2-204ENST00000406516 ARID3AQ99856 593 aa17.84■□□□□ 0.45
LIMK2-204ENST00000406516 LLPHQ9BRT6 129 aaKnown RBP17.84■□□□□ 0.45
LIMK2-204ENST00000406516 PUS3Q9BZE2 481 aaKnown RBP17.84■□□□□ 0.45
LIMK2-204ENST00000406516 E7EWF7 191 aa17.84■□□□□ 0.45
LIMK2-204ENST00000406516 LAMA4Q16363 1823 aa17.84■□□□□ 0.45
LIMK2-204ENST00000406516 COL24A1Q17RW2 1714 aa17.83■□□□□ 0.45
LIMK2-204ENST00000406516 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.83■□□□□ 0.44
LIMK2-204ENST00000406516 ST5P78524 1137 aa17.83■□□□□ 0.44
LIMK2-204ENST00000406516 DRC7Q8IY82 874 aa17.83■□□□□ 0.44
LIMK2-204ENST00000406516 MAP7D2Q96T17 732 aa17.83■□□□□ 0.44
LIMK2-204ENST00000406516 GPR108Q9NPR9 543 aa17.83■□□□□ 0.44
LIMK2-204ENST00000406516 ZNF165P49910 485 aa17.83■□□□□ 0.44
LIMK2-204ENST00000406516 EXOSC10Q01780 885 aaKnown RBP17.83■□□□□ 0.44
LIMK2-204ENST00000406516 SLC10A5Q5PT55 438 aa17.83■□□□□ 0.44
LIMK2-204ENST00000406516 TRIM5Q9C035 493 aa17.83■□□□□ 0.44
LIMK2-204ENST00000406516 RNF113AO15541 343 aaKnown RBP17.82■□□□□ 0.44
LIMK2-204ENST00000406516 HMGN5P82970 282 aaKnown RBP17.82■□□□□ 0.44
LIMK2-204ENST00000406516 GUCY1B3Q02153 619 aa17.82■□□□□ 0.44
LIMK2-204ENST00000406516 TTLL5Q6EMB2 1281 aa17.82■□□□□ 0.44
LIMK2-204ENST00000406516 M0R2C6 588 aa17.82■□□□□ 0.44
LIMK2-204ENST00000406516 ADD1P35611 737 aaKnown RBP17.82■□□□□ 0.44
LIMK2-204ENST00000406516 FKBP4Q02790 459 aaKnown RBP eCLIP17.82■□□□□ 0.44
LIMK2-204ENST00000406516 NAA16Q6N069 864 aaPredicted RBP17.82■□□□□ 0.44
LIMK2-204ENST00000406516 BRIP1Q9BX63 1249 aa17.82■□□□□ 0.44
LIMK2-204ENST00000406516 CCDC186Q7Z3E2 898 aa17.81■□□□□ 0.44
LIMK2-204ENST00000406516 TDRD7Q8NHU6 1098 aaKnown RBP17.81■□□□□ 0.44
LIMK2-204ENST00000406516 CCDC85AQ96PX6 553 aaPredicted RBP17.81■□□□□ 0.44
LIMK2-204ENST00000406516 CCAR1Q8IX12 1150 aaKnown RBP17.8■□□□□ 0.44
LIMK2-204ENST00000406516 USP28Q96RU2 1077 aa17.8■□□□□ 0.44
LIMK2-204ENST00000406516 NRBP1Q9UHY1 535 aa17.8■□□□□ 0.44
LIMK2-204ENST00000406516 NRXN2Q9P2S2 1712 aa17.8■□□□□ 0.44
LIMK2-204ENST00000406516 CDHR2Q9BYE9 1310 aa17.8■□□□□ 0.44
LIMK2-204ENST00000406516 ZNF75DP51815 510 aa17.8■□□□□ 0.44
LIMK2-204ENST00000406516 AGXT2Q9BYV1 514 aa17.8■□□□□ 0.44
LIMK2-204ENST00000406516 KIF3AQ9Y496 699 aa17.8■□□□□ 0.44
LIMK2-204ENST00000406516 PDIA3P30101 505 aaKnown RBP17.79■□□□□ 0.44
LIMK2-204ENST00000406516 CHRNA5P30532 468 aa17.79■□□□□ 0.44
LIMK2-204ENST00000406516 LRMPQ12912 555 aa17.79■□□□□ 0.44
LIMK2-204ENST00000406516 GORABQ5T7V8 394 aa17.79■□□□□ 0.44
LIMK2-204ENST00000406516 OSBP2Q969R2 916 aa17.79■□□□□ 0.44
LIMK2-204ENST00000406516 NLRP3Q96P20 1036 aa17.79■□□□□ 0.44
LIMK2-204ENST00000406516 FHDC1Q9C0D6 1143 aaPredicted RBP17.79■□□□□ 0.44
LIMK2-204ENST00000406516 GOLPH3LQ9H4A5 285 aa17.79■□□□□ 0.44
LIMK2-204ENST00000406516 CEP126Q9P2H0 1117 aa17.79■□□□□ 0.44
LIMK2-204ENST00000406516 PDE8AO60658 829 aa17.79■□□□□ 0.44
LIMK2-204ENST00000406516 HAND2P61296 217 aa17.79■□□□□ 0.44
LIMK2-204ENST00000406516 GPHNQ9NQX3 736 aaPredicted RBP17.79■□□□□ 0.44
LIMK2-204ENST00000406516 RCOR1Q9UKL0 485 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms