RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 PPP2R3BQ9Y5P8 575 aa16.54■□□□□ 0.24
SDF4-203ENST00000403997 PAPPA2Q9BXP8 1791 aa16.54■□□□□ 0.24
SDF4-203ENST00000403997 SUPT20HL1Q3ZLR7 823 aa16.53■□□□□ 0.24
SDF4-203ENST00000403997 GNL3LQ9NVN8 582 aaKnown RBP16.53■□□□□ 0.24
SDF4-203ENST00000403997 ANGEL1Q9UNK9 670 aaKnown RBP16.53■□□□□ 0.24
SDF4-203ENST00000403997 HDLBPQ00341 1268 aaKnown RBP16.52■□□□□ 0.24
SDF4-203ENST00000403997 MTX1Q13505 466 aa16.52■□□□□ 0.24
SDF4-203ENST00000403997 RASA3Q14644 834 aa16.52■□□□□ 0.24
SDF4-203ENST00000403997 SPDYE2Q495Y8 402 aa16.52■□□□□ 0.24
SDF4-203ENST00000403997 FTSJ3Q8IY81 847 aaKnown RBP16.52■□□□□ 0.24
SDF4-203ENST00000403997 WDR66Q8TBY9 1149 aa16.52■□□□□ 0.24
SDF4-203ENST00000403997 TEKT1Q969V4 418 aa16.52■□□□□ 0.24
SDF4-203ENST00000403997 CSRNP1Q96S65 589 aa16.52■□□□□ 0.24
SDF4-203ENST00000403997 SUGT1Q9Y2Z0 365 aa16.52■□□□□ 0.24
SDF4-203ENST00000403997 COL1A1P02452 1464 aaPredicted RBP16.51■□□□□ 0.23
SDF4-203ENST00000403997 PPP1R12BO60237 982 aaPredicted RBP16.51■□□□□ 0.23
SDF4-203ENST00000403997 TIMM10P62072 90 aa16.51■□□□□ 0.23
SDF4-203ENST00000403997 TNFAIP1Q13829 316 aa16.51■□□□□ 0.23
SDF4-203ENST00000403997 NBPF12Q5TAG4 269 aaPredicted RBP16.51■□□□□ 0.23
SDF4-203ENST00000403997 REM2Q8IYK8 340 aaPredicted RBP16.51■□□□□ 0.23
SDF4-203ENST00000403997 MRIQ9BWK5 157 aa16.51■□□□□ 0.23
SDF4-203ENST00000403997 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.51■□□□□ 0.23
SDF4-203ENST00000403997 FZD1Q9UP38 647 aa16.51■□□□□ 0.23
SDF4-203ENST00000403997 MAST3O60307 1309 aa16.5■□□□□ 0.23
SDF4-203ENST00000403997 TCP10L2B9ZVM9 353 aa16.5■□□□□ 0.23
SDF4-203ENST00000403997 TRPA1O75762 1119 aa16.5■□□□□ 0.23
SDF4-203ENST00000403997 PHKA1P46020 1223 aa16.5■□□□□ 0.23
SDF4-203ENST00000403997 TFCP2Q12800 502 aa16.5■□□□□ 0.23
SDF4-203ENST00000403997 LDLRAD1Q5T700 205 aa16.5■□□□□ 0.23
SDF4-203ENST00000403997 RNF186Q9NXI6 227 aa16.5■□□□□ 0.23
SDF4-203ENST00000403997 AKAP2Q9Y2D5 859 aa16.5■□□□□ 0.23
SDF4-203ENST00000403997 PNMA6EA0A0J9YXQ4 647 aa16.49■□□□□ 0.23
SDF4-203ENST00000403997 ADORA1P30542 326 aa16.49■□□□□ 0.23
SDF4-203ENST00000403997 MKRN3Q13064 507 aaKnown RBP16.49■□□□□ 0.23
SDF4-203ENST00000403997 G3BP1Q13283 466 aaKnown RBP eCLIP16.49■□□□□ 0.23
SDF4-203ENST00000403997 ITPRIPQ8IWB1 547 aa16.49■□□□□ 0.23
SDF4-203ENST00000403997 SLC10A4Q96EP9 437 aa16.49■□□□□ 0.23
SDF4-203ENST00000403997 ZDHHC15Q96MV8 337 aa16.49■□□□□ 0.23
SDF4-203ENST00000403997 DENND2AQ9ULE3 1009 aa16.49■□□□□ 0.23
SDF4-203ENST00000403997 SEMA3EO15041 775 aa16.48■□□□□ 0.23
SDF4-203ENST00000403997 TNNI2P48788 182 aa16.48■□□□□ 0.23
SDF4-203ENST00000403997 MAP3K11Q16584 847 aa16.48■□□□□ 0.23
SDF4-203ENST00000403997 CCDC102BQ68D86 513 aa16.48■□□□□ 0.23
SDF4-203ENST00000403997 SAGE1Q9NXZ1 904 aa16.48■□□□□ 0.23
SDF4-203ENST00000403997 A0A1B0GUL7 405 aa16.47■□□□□ 0.23
SDF4-203ENST00000403997 USP2O75604 605 aaPredicted RBP16.47■□□□□ 0.23
SDF4-203ENST00000403997 RLBP1P12271 317 aa16.47■□□□□ 0.23
SDF4-203ENST00000403997 CACNB3P54284 484 aa16.47■□□□□ 0.23
SDF4-203ENST00000403997 APOBEC3HQ6NTF7 200 aaKnown RBP16.47■□□□□ 0.23
SDF4-203ENST00000403997 HHIPL2Q6UWX4 724 aa16.47■□□□□ 0.23
SDF4-203ENST00000403997 XAGE2Q96GT9 111 aa16.47■□□□□ 0.23
SDF4-203ENST00000403997 NEUROD6Q96NK8 337 aa16.47■□□□□ 0.23
SDF4-203ENST00000403997 TMOD2Q9NZR1 351 aa16.47■□□□□ 0.23
SDF4-203ENST00000403997 ECM29Q5VYK3 1845 aa16.47■□□□□ 0.23
SDF4-203ENST00000403997 ZBTB7BO15156 539 aaPredicted RBP16.46■□□□□ 0.23
SDF4-203ENST00000403997 LDHBP07195 334 aaKnown RBP16.46■□□□□ 0.23
SDF4-203ENST00000403997 PRDX5P30044 214 aa16.46■□□□□ 0.23
SDF4-203ENST00000403997 IREB2P48200 963 aaKnown RBP16.46■□□□□ 0.23
SDF4-203ENST00000403997 ATP8B2P98198 1209 aa16.46■□□□□ 0.23
SDF4-203ENST00000403997 SPRYD7Q5W111 196 aa16.46■□□□□ 0.23
SDF4-203ENST00000403997 TMEM39BQ9GZU3 492 aa16.46■□□□□ 0.23
SDF4-203ENST00000403997 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.46■□□□□ 0.23
SDF4-203ENST00000403997 MVPQ14764 893 aaKnown RBP16.45■□□□□ 0.22
SDF4-203ENST00000403997 GORABQ5T7V8 394 aa16.45■□□□□ 0.22
SDF4-203ENST00000403997 CLMNQ96JQ2 1002 aa16.45■□□□□ 0.22
SDF4-203ENST00000403997 TEPSINQ96N21 525 aa16.45■□□□□ 0.22
SDF4-203ENST00000403997 C1orf115Q9H7X2 142 aa16.45■□□□□ 0.22
SDF4-203ENST00000403997 SSC5DA1L4H1 1573 aa16.45■□□□□ 0.22
SDF4-203ENST00000403997 CASP8AP2Q9UKL3 1982 aa16.44■□□□□ 0.22
SDF4-203ENST00000403997 UNCXA6NJT0 531 aa16.44■□□□□ 0.22
SDF4-203ENST00000403997 TM4SF4P48230 202 aa16.44■□□□□ 0.22
SDF4-203ENST00000403997 MLLT1Q03111 559 aaPredicted RBP16.44■□□□□ 0.22
SDF4-203ENST00000403997 SREBF2Q12772 1141 aa16.44■□□□□ 0.22
SDF4-203ENST00000403997 OS9Q13438 667 aaPredicted RBP16.44■□□□□ 0.22
SDF4-203ENST00000403997 RASGRF1Q13972 1273 aa16.44■□□□□ 0.22
SDF4-203ENST00000403997 DIXDC1Q155Q3 683 aa16.44■□□□□ 0.22
SDF4-203ENST00000403997 CDAN1Q8IWY9 1227 aa16.44■□□□□ 0.22
SDF4-203ENST00000403997 ZGPATQ8N5A5 531 aaKnown RBP16.44■□□□□ 0.22
SDF4-203ENST00000403997 ARAP2Q8WZ64 1704 aa16.44■□□□□ 0.22
SDF4-203ENST00000403997 SALL1Q9NSC2 1324 aa16.44■□□□□ 0.22
SDF4-203ENST00000403997 AKAP11Q9UKA4 1901 aa16.43■□□□□ 0.22
SDF4-203ENST00000403997 POLA2Q14181 598 aa16.43■□□□□ 0.22
SDF4-203ENST00000403997 FKBP1CQ5VVH2 108 aa16.43■□□□□ 0.22
SDF4-203ENST00000403997 FAM83AQ86UY5 434 aa16.43■□□□□ 0.22
SDF4-203ENST00000403997 ANKRD13AQ8IZ07 590 aa16.43■□□□□ 0.22
SDF4-203ENST00000403997 PANK1Q8TE04 598 aa16.43■□□□□ 0.22
SDF4-203ENST00000403997 SSH3Q8TE77 659 aa16.43■□□□□ 0.22
SDF4-203ENST00000403997 WNK4Q96J92 1243 aa16.43■□□□□ 0.22
SDF4-203ENST00000403997 ABCF2Q9UG63 623 aa16.43■□□□□ 0.22
SDF4-203ENST00000403997 DAGLAQ9Y4D2 1042 aa16.43■□□□□ 0.22
SDF4-203ENST00000403997 ZBTB22O15209 634 aa16.42■□□□□ 0.22
SDF4-203ENST00000403997 SURF6O75683 361 aaKnown RBP16.42■□□□□ 0.22
SDF4-203ENST00000403997 TBC1D8O95759 1140 aa16.42■□□□□ 0.22
SDF4-203ENST00000403997 CDC42EP5Q6NZY7 148 aa16.42■□□□□ 0.22
SDF4-203ENST00000403997 ABHD8Q96I13 439 aa16.42■□□□□ 0.22
SDF4-203ENST00000403997 MYH13Q9UKX3 1938 aa16.41■□□□□ 0.22
SDF4-203ENST00000403997 MANSC4A6NHS7 340 aaPredicted RBP16.41■□□□□ 0.22
SDF4-203ENST00000403997 ZBTB48P10074 688 aaPredicted RBP16.41■□□□□ 0.22
SDF4-203ENST00000403997 MS4A1P11836 297 aa16.41■□□□□ 0.22
SDF4-203ENST00000403997 MAP3K9P80192 1104 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms