RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 CARD10Q9BWT7 1032 aa6.76□□□□□ -1.33
GABPB1-204ENST00000396464 RASSF4Q9H2L5 321 aa6.76□□□□□ -1.33
GABPB1-204ENST00000396464 FAN1Q9Y2M0 1017 aa6.76□□□□□ -1.33
GABPB1-204ENST00000396464 KRTAP9-6A0A140TA67 174 aa6.76□□□□□ -1.33
GABPB1-204ENST00000396464 TNFRSF10BO14763 440 aa6.76□□□□□ -1.33
GABPB1-204ENST00000396464 FSCN2O14926 492 aa6.76□□□□□ -1.33
GABPB1-204ENST00000396464 SART1O43290 800 aaKnown RBP6.76□□□□□ -1.33
GABPB1-204ENST00000396464 COBLO75128 1261 aa6.76□□□□□ -1.33
GABPB1-204ENST00000396464 PCSK2P16519 638 aa6.76□□□□□ -1.33
GABPB1-204ENST00000396464 ARHGAP4P98171 946 aa6.76□□□□□ -1.33
GABPB1-204ENST00000396464 RBL2Q08999 1139 aa6.76□□□□□ -1.33
GABPB1-204ENST00000396464 HSP90AB4PQ58FF6 505 aa6.76□□□□□ -1.33
GABPB1-204ENST00000396464 ZCRB1Q8TBF4 217 aaKnown RBP6.76□□□□□ -1.33
GABPB1-204ENST00000396464 FAM161BQ96MY7 647 aa6.76□□□□□ -1.33
GABPB1-204ENST00000396464 PBX4Q9BYU1 374 aa6.76□□□□□ -1.33
GABPB1-204ENST00000396464 OSBPL2Q9H1P3 480 aa6.76□□□□□ -1.33
GABPB1-204ENST00000396464 RPLP1P05386 114 aaKnown RBP6.75□□□□□ -1.33
GABPB1-204ENST00000396464 GRIK1P39086 918 aa6.75□□□□□ -1.33
GABPB1-204ENST00000396464 UVSSAQ2YD98 709 aa6.75□□□□□ -1.33
GABPB1-204ENST00000396464 RNF187Q5TA31 235 aaPredicted RBP6.75□□□□□ -1.33
GABPB1-204ENST00000396464 CAPN12Q6ZSI9 719 aa6.75□□□□□ -1.33
GABPB1-204ENST00000396464 ZNF438Q7Z4V0 828 aa6.75□□□□□ -1.33
GABPB1-204ENST00000396464 APBB1IPQ7Z5R6 666 aaPredicted RBP6.75□□□□□ -1.33
GABPB1-204ENST00000396464 RNF34Q969K3 372 aa6.75□□□□□ -1.33
GABPB1-204ENST00000396464 UBL7Q96S82 380 aaPredicted RBP6.75□□□□□ -1.33
GABPB1-204ENST00000396464 SEC31BQ9NQW1 1179 aa6.75□□□□□ -1.33
GABPB1-204ENST00000396464 METTL5Q9NRN9 209 aaKnown RBP6.75□□□□□ -1.33
GABPB1-204ENST00000396464 COL4A3BPQ9Y5P4 624 aa6.75□□□□□ -1.33
GABPB1-204ENST00000396464 GNL2Q13823 731 aaKnown RBP6.74□□□□□ -1.33
GABPB1-204ENST00000396464 BMS1Q14692 1282 aaKnown RBP6.74□□□□□ -1.33
GABPB1-204ENST00000396464 FAM26DQ5JW98 314 aa6.74□□□□□ -1.33
GABPB1-204ENST00000396464 MCTP1Q6DN14 999 aa6.74□□□□□ -1.33
GABPB1-204ENST00000396464 PDE12Q6L8Q7 609 aaKnown RBP6.74□□□□□ -1.33
GABPB1-204ENST00000396464 SMC5Q8IY18 1101 aa6.74□□□□□ -1.33
GABPB1-204ENST00000396464 ELP3Q9H9T3 547 aa6.74□□□□□ -1.33
GABPB1-204ENST00000396464 SH2B1Q9NRF2 756 aaPredicted RBP6.74□□□□□ -1.33
GABPB1-204ENST00000396464 MRPL42Q9Y6G3 142 aaKnown RBP6.74□□□□□ -1.33
GABPB1-204ENST00000396464 PAX4O43316 350 aa6.73□□□□□ -1.33
GABPB1-204ENST00000396464 WISP1O95388 367 aa6.73□□□□□ -1.33
GABPB1-204ENST00000396464 CENPBP07199 599 aaPredicted RBP6.73□□□□□ -1.33
GABPB1-204ENST00000396464 HSD3B2P26439 372 aa6.73□□□□□ -1.33
GABPB1-204ENST00000396464 CD97P48960 835 aa6.73□□□□□ -1.33
GABPB1-204ENST00000396464 IRAK1P51617 712 aa6.73□□□□□ -1.33
GABPB1-204ENST00000396464 PLEKHG6Q3KR16 790 aa6.73□□□□□ -1.33
GABPB1-204ENST00000396464 PMM1Q92871 262 aa6.73□□□□□ -1.33
GABPB1-204ENST00000396464 KCNF1Q9H3M0 494 aa6.73□□□□□ -1.33
GABPB1-204ENST00000396464 A0A0U1RQG5 324 aaPredicted RBP6.72□□□□□ -1.33
GABPB1-204ENST00000396464 U2SURPO15042 1029 aaKnown RBP6.72□□□□□ -1.33
GABPB1-204ENST00000396464 ZBTB39O15060 712 aa6.72□□□□□ -1.33
GABPB1-204ENST00000396464 KIF4AO95239 1232 aa6.72□□□□□ -1.33
GABPB1-204ENST00000396464 TGFB1P01137 390 aa6.72□□□□□ -1.33
GABPB1-204ENST00000396464 CYP2E1P05181 493 aaPredicted RBP6.72□□□□□ -1.33
GABPB1-204ENST00000396464 EPHA1P21709 976 aa6.72□□□□□ -1.33
GABPB1-204ENST00000396464 ARL4DP49703 201 aa6.72□□□□□ -1.33
GABPB1-204ENST00000396464 NFIAQ12857 509 aa6.72□□□□□ -1.33
GABPB1-204ENST00000396464 SPTY2D1Q68D10 685 aaPredicted RBP6.72□□□□□ -1.33
GABPB1-204ENST00000396464 GTF3C2Q8WUA4 911 aaPredicted RBP6.72□□□□□ -1.33
GABPB1-204ENST00000396464 NUDT16Q96DE0 195 aaKnown RBP6.72□□□□□ -1.33
GABPB1-204ENST00000396464 IRF2BPLQ9H1B7 796 aa6.72□□□□□ -1.33
GABPB1-204ENST00000396464 PCDH12Q9NPG4 1184 aa6.72□□□□□ -1.33
GABPB1-204ENST00000396464 KCNK4Q9NYG8 393 aa6.72□□□□□ -1.33
GABPB1-204ENST00000396464 KANSL3Q9P2N6 904 aa6.72□□□□□ -1.33
GABPB1-204ENST00000396464 GABBR1Q9UBS5 961 aa6.72□□□□□ -1.33
GABPB1-204ENST00000396464 H3BRJ5 948 aa6.71□□□□□ -1.34
GABPB1-204ENST00000396464 CES1P23141 567 aa6.71□□□□□ -1.34
GABPB1-204ENST00000396464 ZNF76P36508 570 aa6.71□□□□□ -1.34
GABPB1-204ENST00000396464 XPCQ01831 940 aaPredicted RBP6.71□□□□□ -1.34
GABPB1-204ENST00000396464 MTMR3Q13615 1198 aa6.71□□□□□ -1.34
GABPB1-204ENST00000396464 RALBP1Q15311 655 aa6.71□□□□□ -1.34
GABPB1-204ENST00000396464 INTS5Q6P9B9 1019 aaKnown RBP6.71□□□□□ -1.34
GABPB1-204ENST00000396464 KIAA1211Q6ZU35 1233 aa6.71□□□□□ -1.34
GABPB1-204ENST00000396464 CEP120Q8N960 986 aa6.71□□□□□ -1.34
GABPB1-204ENST00000396464 C7orf69Q9H7B7 122 aa6.71□□□□□ -1.34
GABPB1-204ENST00000396464 MRS2Q9HD23 443 aa6.71□□□□□ -1.34
GABPB1-204ENST00000396464 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.71□□□□□ -1.34
GABPB1-204ENST00000396464 EIF3JO75822 258 aaKnown RBP6.7□□□□□ -1.34
GABPB1-204ENST00000396464 PIP4K2BP78356 416 aa6.7□□□□□ -1.34
GABPB1-204ENST00000396464 ARID5AQ03989 594 aa6.7□□□□□ -1.34
GABPB1-204ENST00000396464 FMR1Q06787 632 aaKnown RBP eCLIP6.7□□□□□ -1.34
GABPB1-204ENST00000396464 C8orf34Q49A92 452 aa6.7□□□□□ -1.34
GABPB1-204ENST00000396464 SOGA3Q5TF21 947 aa6.7□□□□□ -1.34
GABPB1-204ENST00000396464 RNF43Q68DV7 783 aa6.7□□□□□ -1.34
GABPB1-204ENST00000396464 ANKRD34AQ69YU3 496 aa6.7□□□□□ -1.34
GABPB1-204ENST00000396464 FDX2Q6P4F2 183 aa6.7□□□□□ -1.34
GABPB1-204ENST00000396464 TMC7Q7Z402 723 aa6.7□□□□□ -1.34
GABPB1-204ENST00000396464 FILIP1Q7Z7B0 1213 aa6.7□□□□□ -1.34
GABPB1-204ENST00000396464 TRIM42Q8IWZ5 723 aa6.7□□□□□ -1.34
GABPB1-204ENST00000396464 RPUSD2Q8IZ73 545 aaKnown RBP6.7□□□□□ -1.34
GABPB1-204ENST00000396464 ARMC10Q8N2F6 343 aa6.7□□□□□ -1.34
GABPB1-204ENST00000396464 UBASH3BQ8TF42 649 aa6.7□□□□□ -1.34
GABPB1-204ENST00000396464 SLC7A3Q8WY07 619 aa6.7□□□□□ -1.34
GABPB1-204ENST00000396464 WNT8BQ93098 351 aa6.7□□□□□ -1.34
GABPB1-204ENST00000396464 KLHDC7BQ96G42 594 aa6.7□□□□□ -1.34
GABPB1-204ENST00000396464 MYRFLQ96LU7 910 aa6.7□□□□□ -1.34
GABPB1-204ENST00000396464 POP1Q99575 1024 aaKnown RBP6.7□□□□□ -1.34
GABPB1-204ENST00000396464 DBNDD2Q9BQY9 259 aa6.7□□□□□ -1.34
GABPB1-204ENST00000396464 IFT57Q9NWB7 429 aa6.7□□□□□ -1.34
GABPB1-204ENST00000396464 TMEM63CQ9P1W3 806 aa6.7□□□□□ -1.34
GABPB1-204ENST00000396464 PARP2Q9UGN5 583 aa6.7□□□□□ -1.34
GABPB1-204ENST00000396464 HMX2A2RU54 273 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms