RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 PATL2C9JE40 543 aaKnown RBP19.67■□□□□ 0.74
NUP50-202ENST00000396096 KCNQ2O43526 872 aa19.67■□□□□ 0.74
NUP50-202ENST00000396096 KDM4AO75164 1064 aa19.67■□□□□ 0.74
NUP50-202ENST00000396096 TNMDQ9H2S6 317 aa19.67■□□□□ 0.74
NUP50-202ENST00000396096 ILDR1Q86SU0 546 aaPredicted RBP19.67■□□□□ 0.74
NUP50-202ENST00000396096 ANGEL1Q9UNK9 670 aaKnown RBP19.67■□□□□ 0.74
NUP50-202ENST00000396096 CNTNAP4Q9C0A0 1308 aa19.66■□□□□ 0.74
NUP50-202ENST00000396096 COL4A1P02462 1669 aa19.66■□□□□ 0.74
NUP50-202ENST00000396096 SH2B2O14492 632 aaPredicted RBP19.66■□□□□ 0.74
NUP50-202ENST00000396096 CHRNDQ07001 517 aa19.66■□□□□ 0.74
NUP50-202ENST00000396096 BICD2Q8TD16 824 aa19.66■□□□□ 0.74
NUP50-202ENST00000396096 CDC5LQ99459 802 aaKnown RBP19.66■□□□□ 0.74
NUP50-202ENST00000396096 USP25Q9UHP3 1055 aa19.66■□□□□ 0.74
NUP50-202ENST00000396096 TOM1O60784 492 aa19.65■□□□□ 0.74
NUP50-202ENST00000396096 APPP05067 770 aa19.65■□□□□ 0.74
NUP50-202ENST00000396096 TYRO3Q06418 890 aa19.65■□□□□ 0.74
NUP50-202ENST00000396096 SF3B3Q15393 1217 aaKnown RBP19.65■□□□□ 0.74
NUP50-202ENST00000396096 VPS72Q15906 364 aa19.65■□□□□ 0.74
NUP50-202ENST00000396096 MAGEB6Q8N7X4 407 aa19.65■□□□□ 0.74
NUP50-202ENST00000396096 LINC00116Q8NCU8 138 aa19.65■□□□□ 0.74
NUP50-202ENST00000396096 TMEM87BQ96K49 555 aa19.65■□□□□ 0.74
NUP50-202ENST00000396096 PNPLA7Q6ZV29 1317 aa19.65■□□□□ 0.74
NUP50-202ENST00000396096 SNAP23O00161 211 aa19.65■□□□□ 0.74
NUP50-202ENST00000396096 NR1I2O75469 434 aa19.65■□□□□ 0.74
NUP50-202ENST00000396096 CYB5R4Q7L1T6 521 aa19.65■□□□□ 0.74
NUP50-202ENST00000396096 IFNL3Q8IZI9 196 aa19.65■□□□□ 0.74
NUP50-202ENST00000396096 FAM200AQ8TCP9 573 aa19.65■□□□□ 0.74
NUP50-202ENST00000396096 USP28Q96RU2 1077 aa19.65■□□□□ 0.74
NUP50-202ENST00000396096 MRVI1Q9Y6F6 885 aa19.65■□□□□ 0.74
NUP50-202ENST00000396096 ADCY5O95622 1261 aa19.64■□□□□ 0.73
NUP50-202ENST00000396096 GNAT2P19087 354 aa19.64■□□□□ 0.73
NUP50-202ENST00000396096 FOSBP53539 338 aa19.64■□□□□ 0.73
NUP50-202ENST00000396096 FBXO18Q8NFZ0 1043 aa19.64■□□□□ 0.73
NUP50-202ENST00000396096 EPB41L4AQ9HCS5 686 aaPredicted RBP19.64■□□□□ 0.73
NUP50-202ENST00000396096 ORC3Q9UBD5 711 aaPredicted RBP19.64■□□□□ 0.73
NUP50-202ENST00000396096 ZNF804BA4D1E1 1349 aa19.64■□□□□ 0.73
NUP50-202ENST00000396096 MBD4O95243 580 aa19.63■□□□□ 0.73
NUP50-202ENST00000396096 BCAMP50895 628 aa19.63■□□□□ 0.73
NUP50-202ENST00000396096 CAMK4Q16566 473 aa19.63■□□□□ 0.73
NUP50-202ENST00000396096 C8orf76Q96K31 380 aa19.63■□□□□ 0.73
NUP50-202ENST00000396096 RTEL1Q9NZ71 1219 aa19.63■□□□□ 0.73
NUP50-202ENST00000396096 COL24A1Q17RW2 1714 aa19.63■□□□□ 0.73
NUP50-202ENST00000396096 CPLX1O14810 134 aa19.62■□□□□ 0.73
NUP50-202ENST00000396096 SLC10A5Q5PT55 438 aa19.62■□□□□ 0.73
NUP50-202ENST00000396096 SGMS1Q86VZ5 419 aa19.62■□□□□ 0.73
NUP50-202ENST00000396096 DENND2AQ9ULE3 1009 aa19.62■□□□□ 0.73
NUP50-202ENST00000396096 GSG1L2A8MUP6 293 aa19.62■□□□□ 0.73
NUP50-202ENST00000396096 FAM98CQ17RN3 349 aaKnown RBP19.62■□□□□ 0.73
NUP50-202ENST00000396096 BRAPQ7Z569 592 aa19.62■□□□□ 0.73
NUP50-202ENST00000396096 NKX2-3Q8TAU0 364 aa19.62■□□□□ 0.73
NUP50-202ENST00000396096 IGDCC4Q8TDY8 1250 aa19.62■□□□□ 0.73
NUP50-202ENST00000396096 NAPBQ9H115 298 aa19.62■□□□□ 0.73
NUP50-202ENST00000396096 NEDD4P46934 1319 aa19.62■□□□□ 0.73
NUP50-202ENST00000396096 CTAGE5O15320 804 aa19.61■□□□□ 0.73
NUP50-202ENST00000396096 OFD1O75665 1012 aa19.61■□□□□ 0.73
NUP50-202ENST00000396096 PTMAP06454 111 aaKnown RBP19.61■□□□□ 0.73
NUP50-202ENST00000396096 GUCY1B3Q02153 619 aa19.61■□□□□ 0.73
NUP50-202ENST00000396096 ERFEQ4G0M1 354 aa19.61■□□□□ 0.73
NUP50-202ENST00000396096 RC3H1Q5TC82 1133 aaKnown RBP19.61■□□□□ 0.73
NUP50-202ENST00000396096 AEBP2Q6ZN18 517 aaPredicted RBP19.61■□□□□ 0.73
NUP50-202ENST00000396096 CNNM2Q9H8M5 875 aa19.61■□□□□ 0.73
NUP50-202ENST00000396096 ARMT1Q9H993 441 aa19.61■□□□□ 0.73
NUP50-202ENST00000396096 ECM29Q5VYK3 1845 aa19.61■□□□□ 0.73
NUP50-202ENST00000396096 B4E1Z4 1266 aa19.6■□□□□ 0.73
NUP50-202ENST00000396096 CDKL5O76039 1030 aa19.6■□□□□ 0.73
NUP50-202ENST00000396096 LIFRP42702 1097 aa19.6■□□□□ 0.73
NUP50-202ENST00000396096 UBE4AQ14139 1066 aa19.6■□□□□ 0.73
NUP50-202ENST00000396096 APOA5Q6Q788 366 aa19.6■□□□□ 0.73
NUP50-202ENST00000396096 ANKRD18AQ8IVF6 992 aa19.6■□□□□ 0.73
NUP50-202ENST00000396096 CCAR1Q8IX12 1150 aaKnown RBP19.6■□□□□ 0.73
NUP50-202ENST00000396096 FTOQ9C0B1 505 aaKnown RBP eCLIP19.6■□□□□ 0.73
NUP50-202ENST00000396096 BSDC1Q9NW68 430 aaPredicted RBP19.6■□□□□ 0.73
NUP50-202ENST00000396096 NID2Q14112 1375 aa19.6■□□□□ 0.73
NUP50-202ENST00000396096 CAVIN2O95810 425 aa19.6■□□□□ 0.73
NUP50-202ENST00000396096 METAP2P50579 478 aaKnown RBP eCLIP19.6■□□□□ 0.73
NUP50-202ENST00000396096 CEBPZQ03701 1054 aaKnown RBP19.6■□□□□ 0.73
NUP50-202ENST00000396096 CKAP2LQ8IYA6 745 aa19.6■□□□□ 0.73
NUP50-202ENST00000396096 LY9Q9HBG7 655 aa19.6■□□□□ 0.73
NUP50-202ENST00000396096 NHSQ6T4R5 1651 aa19.6■□□□□ 0.73
NUP50-202ENST00000396096 BTAF1O14981 1849 aa19.6■□□□□ 0.73
NUP50-202ENST00000396096 PPFIA3O75145 1194 aa19.59■□□□□ 0.73
NUP50-202ENST00000396096 PIP4K2BP78356 416 aa19.59■□□□□ 0.73
NUP50-202ENST00000396096 AKNAD1Q5T1N1 836 aa19.59■□□□□ 0.73
NUP50-202ENST00000396096 ENGASEQ8NFI3 743 aa19.59■□□□□ 0.73
NUP50-202ENST00000396096 STAG1Q8WVM7 1258 aa19.59■□□□□ 0.73
NUP50-202ENST00000396096 MTA3Q9BTC8 594 aa19.59■□□□□ 0.73
NUP50-202ENST00000396096 NACAP1Q9BZK3 213 aa19.59■□□□□ 0.73
NUP50-202ENST00000396096 KRT23Q9C075 422 aa19.59■□□□□ 0.73
NUP50-202ENST00000396096 POLR3EQ9NVU0 708 aa19.59■□□□□ 0.73
NUP50-202ENST00000396096 THSD7AQ9UPZ6 1657 aa19.59■□□□□ 0.73
NUP50-202ENST00000396096 A0A1W2PQ27 194 aa19.58■□□□□ 0.73
NUP50-202ENST00000396096 A0A1W2PQ64 194 aa19.58■□□□□ 0.73
NUP50-202ENST00000396096 A0A1W2PQD8 194 aa19.58■□□□□ 0.73
NUP50-202ENST00000396096 AP5Z1O43299 807 aa19.58■□□□□ 0.73
NUP50-202ENST00000396096 YEATS4O95619 227 aa19.58■□□□□ 0.73
NUP50-202ENST00000396096 SNW1Q13573 536 aaKnown RBP19.58■□□□□ 0.73
NUP50-202ENST00000396096 SASS6Q6UVJ0 657 aa19.58■□□□□ 0.73
NUP50-202ENST00000396096 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.58■□□□□ 0.73
NUP50-202ENST00000396096 C3orf67Q6ZVT6 689 aa19.58■□□□□ 0.73
NUP50-202ENST00000396096 LCORLQ8N3X6 602 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms