RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 ZKSCAN5Q9Y2L8 839 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 LEMD3Q9Y2U8 911 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 UNC13AQ9UPW8 1703 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 RB1CC1Q8TDY2 1594 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 INSRP06213 1382 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 KTN1Q86UP2 1357 aaKnown RBP4.31□□□□□ -1.72
XRCC4-203ENST00000396027 CEP162Q5TB80 1403 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 RAD54L2Q9Y4B4 1467 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 TMCO5BA8MYB1 307 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 REC8O95072 547 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 FOSL1P15407 271 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 CFPP27918 469 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 MCM4P33991 863 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 GSCP56915 257 aaPredicted RBP4.31□□□□□ -1.72
XRCC4-203ENST00000396027 IRF5Q13568 498 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 PDCD2Q16342 344 aaPredicted RBP4.31□□□□□ -1.72
XRCC4-203ENST00000396027 CCDC30Q5VVM6 783 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 SPTY2D1Q68D10 685 aaPredicted RBP4.31□□□□□ -1.72
XRCC4-203ENST00000396027 TTLL5Q6EMB2 1281 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 ELMSAN1Q6PJG2 1045 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 CENPQQ7L2Z9 268 aaPredicted RBP4.31□□□□□ -1.72
XRCC4-203ENST00000396027 CILP2Q8IUL8 1156 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 SUGP1Q8IWZ8 645 aaKnown RBP4.31□□□□□ -1.72
XRCC4-203ENST00000396027 AGGF1Q8N302 714 aaeCLIP4.31□□□□□ -1.72
XRCC4-203ENST00000396027 TMEM40Q8WWA1 233 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 MYRFLQ96LU7 910 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 ATG3Q9NT62 314 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 LMCD1Q9NZU5 365 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 CHMP5Q9NZZ3 219 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 DOLKQ9UPQ8 538 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 R3HCC1Q9Y3T6 440 aaKnown RBP4.31□□□□□ -1.72
XRCC4-203ENST00000396027 NACADO15069 1562 aa4.3□□□□□ -1.72
XRCC4-203ENST00000396027 ROCK2O75116 1388 aaKnown RBP4.3□□□□□ -1.72
XRCC4-203ENST00000396027 KANK1Q14678 1352 aa4.3□□□□□ -1.72
XRCC4-203ENST00000396027 CARMIL2Q6F5E8 1435 aa4.3□□□□□ -1.72
XRCC4-203ENST00000396027 GOLGA3Q08378 1498 aa4.3□□□□□ -1.72
XRCC4-203ENST00000396027 A0A1B0GUL7 405 aa4.3□□□□□ -1.72
XRCC4-203ENST00000396027 COQ9O75208 318 aa4.3□□□□□ -1.72
XRCC4-203ENST00000396027 BAG4O95429 457 aaKnown RBP4.3□□□□□ -1.72
XRCC4-203ENST00000396027 CASQ1P31415 396 aa4.3□□□□□ -1.72
XRCC4-203ENST00000396027 CD151P48509 253 aa4.3□□□□□ -1.72
XRCC4-203ENST00000396027 NASPP49321 788 aaPredicted RBP4.3□□□□□ -1.72
XRCC4-203ENST00000396027 PSMC1P62191 440 aaKnown RBP4.3□□□□□ -1.72
XRCC4-203ENST00000396027 SEMA3FQ13275 785 aa4.3□□□□□ -1.72
XRCC4-203ENST00000396027 C11orf91Q3C1V1 193 aa4.3□□□□□ -1.72
XRCC4-203ENST00000396027 HSP90AB2PQ58FF8 381 aa4.3□□□□□ -1.72
XRCC4-203ENST00000396027 NFXL1Q6ZNB6 911 aa4.3□□□□□ -1.72
XRCC4-203ENST00000396027 LCNL1Q6ZST4 164 aa4.3□□□□□ -1.72
XRCC4-203ENST00000396027 KRT222Q8N1A0 295 aa4.3□□□□□ -1.72
XRCC4-203ENST00000396027 CXorf38Q8TB03 319 aa4.3□□□□□ -1.72
XRCC4-203ENST00000396027 STAG1Q8WVM7 1258 aa4.3□□□□□ -1.72
XRCC4-203ENST00000396027 FAM46AQ96IP4 442 aaKnown RBP4.3□□□□□ -1.72
XRCC4-203ENST00000396027 RMDN2Q96LZ7 410 aa4.3□□□□□ -1.72
XRCC4-203ENST00000396027 PNMA5Q96PV4 448 aa4.3□□□□□ -1.72
XRCC4-203ENST00000396027 CHIC2Q9UKJ5 165 aa4.3□□□□□ -1.72
XRCC4-203ENST00000396027 PARP3Q9Y6F1 533 aa4.3□□□□□ -1.72
XRCC4-203ENST00000396027 EIF3AQ14152 1382 aaKnown RBP4.29□□□□□ -1.72
XRCC4-203ENST00000396027 YEATS2Q9ULM3 1422 aa4.29□□□□□ -1.72
XRCC4-203ENST00000396027 ATP8B1O43520 1251 aa4.29□□□□□ -1.72
XRCC4-203ENST00000396027 TUBB4AP04350 444 aa4.29□□□□□ -1.72
XRCC4-203ENST00000396027 IVLP07476 585 aa4.29□□□□□ -1.72
XRCC4-203ENST00000396027 CPB1P15086 417 aa4.29□□□□□ -1.72
XRCC4-203ENST00000396027 SOX11P35716 441 aa4.29□□□□□ -1.72
XRCC4-203ENST00000396027 MAGEA8P43361 318 aa4.29□□□□□ -1.72
XRCC4-203ENST00000396027 RAP1GAPP47736 663 aa4.29□□□□□ -1.72
XRCC4-203ENST00000396027 TRAF1Q13077 416 aa4.29□□□□□ -1.72
XRCC4-203ENST00000396027 DDX10Q13206 875 aaKnown RBP4.29□□□□□ -1.72
XRCC4-203ENST00000396027 MCM6Q14566 821 aa4.29□□□□□ -1.72
XRCC4-203ENST00000396027 TERF2Q15554 542 aa4.29□□□□□ -1.72
XRCC4-203ENST00000396027 TEAD4Q15561 434 aa4.29□□□□□ -1.72
XRCC4-203ENST00000396027 WASHC4Q2M389 1173 aa4.29□□□□□ -1.72
XRCC4-203ENST00000396027 HDGFL1Q5TGJ6 251 aa4.29□□□□□ -1.72
XRCC4-203ENST00000396027 TMED8Q6PL24 325 aaPredicted RBP4.29□□□□□ -1.72
XRCC4-203ENST00000396027 PHTF2Q8N3S3 785 aa4.29□□□□□ -1.72
XRCC4-203ENST00000396027 FAM184AQ8NB25 1140 aa4.29□□□□□ -1.72
XRCC4-203ENST00000396027 ANKRD20A12PQ8NF67 263 aa4.29□□□□□ -1.72
XRCC4-203ENST00000396027 RHPN1Q8TCX5 695 aa4.29□□□□□ -1.72
XRCC4-203ENST00000396027 C7orf43Q8WVR3 580 aa4.29□□□□□ -1.72
XRCC4-203ENST00000396027 TCP11Q8WWU5 503 aa4.29□□□□□ -1.72
XRCC4-203ENST00000396027 L3MBTL2Q969R5 705 aa4.29□□□□□ -1.72
XRCC4-203ENST00000396027 ITGB1BP2Q9UKP3 347 aa4.29□□□□□ -1.72
XRCC4-203ENST00000396027 SYNPO2Q9UMS6 1093 aa4.29□□□□□ -1.72
XRCC4-203ENST00000396027 MORC2Q9Y6X9 1032 aaPredicted RBP4.29□□□□□ -1.72
XRCC4-203ENST00000396027 MAPK8IP3Q9UPT6 1336 aa4.29□□□□□ -1.72
XRCC4-203ENST00000396027 CECR2Q9BXF3 1484 aa4.29□□□□□ -1.72
XRCC4-203ENST00000396027 ANKRD33BA6NCL7 494 aa4.28□□□□□ -1.72
XRCC4-203ENST00000396027 DHX16O60231 1041 aaKnown RBP4.28□□□□□ -1.72
XRCC4-203ENST00000396027 RDXP35241 583 aaKnown RBP4.28□□□□□ -1.72
XRCC4-203ENST00000396027 NOP2P46087 812 aaKnown RBP4.28□□□□□ -1.72
XRCC4-203ENST00000396027 TYRO3Q06418 890 aa4.28□□□□□ -1.72
XRCC4-203ENST00000396027 BMS1Q14692 1282 aaKnown RBP4.28□□□□□ -1.72
XRCC4-203ENST00000396027 ZRSR1Q15695 479 aaKnown RBP4.28□□□□□ -1.72
XRCC4-203ENST00000396027 RTN1Q16799 776 aa4.28□□□□□ -1.72
XRCC4-203ENST00000396027 SLFNL1Q499Z3 407 aa4.28□□□□□ -1.72
XRCC4-203ENST00000396027 PERM1Q5SV97 790 aa4.28□□□□□ -1.72
XRCC4-203ENST00000396027 GORABQ5T7V8 394 aa4.28□□□□□ -1.72
XRCC4-203ENST00000396027 C1QL4Q86Z23 238 aa4.28□□□□□ -1.72
XRCC4-203ENST00000396027 FAM20CQ8IXL6 584 aa4.28□□□□□ -1.72
XRCC4-203ENST00000396027 LRRC56Q8IYG6 542 aaPredicted RBP4.28□□□□□ -1.72
XRCC4-203ENST00000396027 FLCNQ8NFG4 579 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms