RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 RPS12P25398 132 aaKnown RBP11.46□□□□□ -0.57
HMGN1-202ENST00000380747 GYG1P46976 350 aa11.46□□□□□ -0.57
HMGN1-202ENST00000380747 C20orf194Q5TEA3 1177 aa11.46□□□□□ -0.57
HMGN1-202ENST00000380747 ATG9AQ7Z3C6 839 aa11.46□□□□□ -0.57
HMGN1-202ENST00000380747 MICALL2Q8IY33 904 aa11.46□□□□□ -0.57
HMGN1-202ENST00000380747 VGLL2Q8N8G2 317 aa11.46□□□□□ -0.57
HMGN1-202ENST00000380747 DPF2Q92785 391 aa11.46□□□□□ -0.57
HMGN1-202ENST00000380747 COPRSQ9NQ92 184 aa11.46□□□□□ -0.57
HMGN1-202ENST00000380747 CEP126Q9P2H0 1117 aa11.46□□□□□ -0.57
HMGN1-202ENST00000380747 DDX19BQ9UMR2 479 aa11.46□□□□□ -0.57
HMGN1-202ENST00000380747 A0A1B0GUL6 1792 aa11.46□□□□□ -0.58
HMGN1-202ENST00000380747 IFIT1P09914 478 aaKnown RBP11.45□□□□□ -0.58
HMGN1-202ENST00000380747 SLC5A1P13866 664 aa11.45□□□□□ -0.58
HMGN1-202ENST00000380747 HIBADHP31937 336 aaKnown RBP11.45□□□□□ -0.58
HMGN1-202ENST00000380747 IL15P40933 162 aaPredicted RBP11.45□□□□□ -0.58
HMGN1-202ENST00000380747 GTF2IP78347 998 aa11.45□□□□□ -0.58
HMGN1-202ENST00000380747 ATP8B2P98198 1209 aa11.45□□□□□ -0.58
HMGN1-202ENST00000380747 NOGQ13253 232 aa11.45□□□□□ -0.58
HMGN1-202ENST00000380747 GRM1Q13255 1194 aa11.45□□□□□ -0.58
HMGN1-202ENST00000380747 PUM3Q15397 648 aaKnown RBP11.45□□□□□ -0.58
HMGN1-202ENST00000380747 CAVIN4Q5BKX8 364 aa11.45□□□□□ -0.58
HMGN1-202ENST00000380747 RBM26Q5T8P6 1007 aaKnown RBP11.45□□□□□ -0.58
HMGN1-202ENST00000380747 STRIP1Q5VSL9 837 aa11.45□□□□□ -0.58
HMGN1-202ENST00000380747 TTLL5Q6EMB2 1281 aa11.45□□□□□ -0.58
HMGN1-202ENST00000380747 VPS37DQ86XT2 251 aa11.45□□□□□ -0.58
HMGN1-202ENST00000380747 KCNV2Q8TDN2 545 aa11.45□□□□□ -0.58
HMGN1-202ENST00000380747 MXD3Q9BW11 206 aa11.45□□□□□ -0.58
HMGN1-202ENST00000380747 TSKSQ9UJT2 592 aa11.45□□□□□ -0.58
HMGN1-202ENST00000380747 GABBR2O75899 941 aa11.44□□□□□ -0.58
HMGN1-202ENST00000380747 IL1R1P14778 569 aa11.44□□□□□ -0.58
HMGN1-202ENST00000380747 G3BP1Q13283 466 aaKnown RBP eCLIP11.44□□□□□ -0.58
HMGN1-202ENST00000380747 PDE3AQ14432 1141 aa11.44□□□□□ -0.58
HMGN1-202ENST00000380747 ATP2B3Q16720 1220 aa11.44□□□□□ -0.58
HMGN1-202ENST00000380747 TBC1D10BQ4KMP7 808 aaPredicted RBP11.44□□□□□ -0.58
HMGN1-202ENST00000380747 DACT2Q5SW24 774 aa11.44□□□□□ -0.58
HMGN1-202ENST00000380747 CDC37L1Q7L3B6 337 aa11.44□□□□□ -0.58
HMGN1-202ENST00000380747 SAMD7Q7Z3H4 446 aa11.44□□□□□ -0.58
HMGN1-202ENST00000380747 AGBL3Q8NEM8 1001 aa11.44□□□□□ -0.58
HMGN1-202ENST00000380747 TRPM4Q8TD43 1214 aa11.44□□□□□ -0.58
HMGN1-202ENST00000380747 FAM84BQ96KN1 310 aaPredicted RBP11.44□□□□□ -0.58
HMGN1-202ENST00000380747 GLIS2Q9BZE0 524 aaPredicted RBP11.44□□□□□ -0.58
HMGN1-202ENST00000380747 JAG2Q9Y219 1238 aa11.44□□□□□ -0.58
HMGN1-202ENST00000380747 FRAT2O75474 233 aaPredicted RBP11.43□□□□□ -0.58
HMGN1-202ENST00000380747 USP17L8P0C7I0 530 aa11.43□□□□□ -0.58
HMGN1-202ENST00000380747 FGFR2P21802 821 aa11.43□□□□□ -0.58
HMGN1-202ENST00000380747 TFCP2Q12800 502 aa11.43□□□□□ -0.58
HMGN1-202ENST00000380747 OS9Q13438 667 aaPredicted RBP11.43□□□□□ -0.58
HMGN1-202ENST00000380747 DGKZQ13574 1117 aa11.43□□□□□ -0.58
HMGN1-202ENST00000380747 ASTLQ6HA08 431 aaPredicted RBP11.43□□□□□ -0.58
HMGN1-202ENST00000380747 LPIN2Q92539 896 aa11.43□□□□□ -0.58
HMGN1-202ENST00000380747 CHMP4BQ9H444 224 aaKnown RBP11.43□□□□□ -0.58
HMGN1-202ENST00000380747 SAGE1Q9NXZ1 904 aa11.43□□□□□ -0.58
HMGN1-202ENST00000380747 IQSEC3Q9UPP2 1182 aaPredicted RBP11.43□□□□□ -0.58
HMGN1-202ENST00000380747 SCN9AQ15858 1988 aa11.43□□□□□ -0.58
HMGN1-202ENST00000380747 MYO3BQ8WXR4 1341 aa11.42□□□□□ -0.58
HMGN1-202ENST00000380747 SURF6O75683 361 aaKnown RBP11.42□□□□□ -0.58
HMGN1-202ENST00000380747 BCAMP50895 628 aa11.42□□□□□ -0.58
HMGN1-202ENST00000380747 HIRAP54198 1017 aaPredicted RBP11.42□□□□□ -0.58
HMGN1-202ENST00000380747 RRP1P56182 461 aaKnown RBP11.42□□□□□ -0.58
HMGN1-202ENST00000380747 CHAF1AQ13111 956 aaPredicted RBP11.42□□□□□ -0.58
HMGN1-202ENST00000380747 TPRNQ4KMQ1 711 aa11.42□□□□□ -0.58
HMGN1-202ENST00000380747 CEP85Q6P2H3 762 aa11.42□□□□□ -0.58
HMGN1-202ENST00000380747 FBXO33Q7Z6M2 555 aa11.42□□□□□ -0.58
HMGN1-202ENST00000380747 KIAA0825Q8IV33 1275 aa11.42□□□□□ -0.58
HMGN1-202ENST00000380747 TDRD7Q8NHU6 1098 aaKnown RBP11.42□□□□□ -0.58
HMGN1-202ENST00000380747 SSH3Q8TE77 659 aa11.42□□□□□ -0.58
HMGN1-202ENST00000380747 GMLQ99445 158 aa11.42□□□□□ -0.58
HMGN1-202ENST00000380747 CASP8AP2Q9UKL3 1982 aa11.41□□□□□ -0.58
HMGN1-202ENST00000380747 SASH1O94885 1247 aa11.41□□□□□ -0.58
HMGN1-202ENST00000380747 EGFRP00533 1210 aa11.41□□□□□ -0.58
HMGN1-202ENST00000380747 KIF4BQ2VIQ3 1234 aa11.41□□□□□ -0.58
HMGN1-202ENST00000380747 OGFOD1Q8N543 542 aa11.41□□□□□ -0.58
HMGN1-202ENST00000380747 LARP6Q9BRS8 491 aaKnown RBP11.41□□□□□ -0.58
HMGN1-202ENST00000380747 ZBTB40Q9NUA8 1239 aa11.41□□□□□ -0.58
HMGN1-202ENST00000380747 AKAP2Q9Y2D5 859 aa11.41□□□□□ -0.58
HMGN1-202ENST00000380747 ZNF609O15014 1411 aa11.41□□□□□ -0.58
HMGN1-202ENST00000380747 FAM205AQ6ZU69 1335 aa11.4□□□□□ -0.58
HMGN1-202ENST00000380747 F8W031 263 aaPredicted RBP11.4□□□□□ -0.58
HMGN1-202ENST00000380747 PDE4AP27815 886 aa11.4□□□□□ -0.58
HMGN1-202ENST00000380747 HUNKP57058 714 aa11.4□□□□□ -0.58
HMGN1-202ENST00000380747 ZNF280AP59817 542 aaPredicted RBP11.4□□□□□ -0.58
HMGN1-202ENST00000380747 TIMM10P62072 90 aa11.4□□□□□ -0.58
HMGN1-202ENST00000380747 RPAP2Q8IXW5 612 aaPredicted RBP11.4□□□□□ -0.58
HMGN1-202ENST00000380747 CERS5Q8N5B7 392 aa11.4□□□□□ -0.58
HMGN1-202ENST00000380747 NEUROD6Q96NK8 337 aa11.4□□□□□ -0.58
HMGN1-202ENST00000380747 MYOZ2Q9NPC6 264 aa11.4□□□□□ -0.58
HMGN1-202ENST00000380747 HDAC9Q9UKV0 1011 aa11.4□□□□□ -0.58
HMGN1-202ENST00000380747 A0A1B0GUL7 405 aa11.39□□□□□ -0.59
HMGN1-202ENST00000380747 FAM155AB1AL88 458 aaPredicted RBP11.39□□□□□ -0.59
HMGN1-202ENST00000380747 ADORA1P30542 326 aa11.39□□□□□ -0.59
HMGN1-202ENST00000380747 FKBP1AP62942 108 aaKnown RBP11.39□□□□□ -0.59
HMGN1-202ENST00000380747 MFSD14BQ5SR56 506 aa11.39□□□□□ -0.59
HMGN1-202ENST00000380747 PDCD7Q8N8D1 485 aaKnown RBP11.39□□□□□ -0.59
HMGN1-202ENST00000380747 CCDC102AQ96A19 550 aa11.39□□□□□ -0.59
HMGN1-202ENST00000380747 ZIC5Q96T25 663 aa11.39□□□□□ -0.59
HMGN1-202ENST00000380747 CRISPLD2Q9H0B8 497 aa11.39□□□□□ -0.59
HMGN1-202ENST00000380747 GNL3LQ9NVN8 582 aaKnown RBP11.39□□□□□ -0.59
HMGN1-202ENST00000380747 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.39□□□□□ -0.59
HMGN1-202ENST00000380747 ASTN2O75129 1339 aaPredicted RBP11.38□□□□□ -0.59
HMGN1-202ENST00000380747 PSME4Q14997 1843 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms