RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 CREBRFQ8IUR6 639 aa19.25■□□□□ 0.67
PCDHA1-201ENST00000378133 ABCA3Q99758 1704 aa19.25■□□□□ 0.67
PCDHA1-201ENST00000378133 ROBO1Q9Y6N7 1651 aa19.25■□□□□ 0.67
PCDHA1-201ENST00000378133 LAMB4A4D0S4 1761 aa19.24■□□□□ 0.67
PCDHA1-201ENST00000378133 SCARF1Q14162 830 aa19.24■□□□□ 0.67
PCDHA1-201ENST00000378133 E4F1Q66K89 784 aaPredicted RBP19.24■□□□□ 0.67
PCDHA1-201ENST00000378133 SYT10Q6XYQ8 523 aa19.24■□□□□ 0.67
PCDHA1-201ENST00000378133 TOM1L2Q6ZVM7 507 aa19.24■□□□□ 0.67
PCDHA1-201ENST00000378133 SYTL4Q96C24 671 aaPredicted RBP19.24■□□□□ 0.67
PCDHA1-201ENST00000378133 SDF4Q9BRK5 362 aa19.24■□□□□ 0.67
PCDHA1-201ENST00000378133 OSBPL5Q9H0X9 879 aaPredicted RBP19.24■□□□□ 0.67
PCDHA1-201ENST00000378133 ABCC6O95255 1503 aa19.24■□□□□ 0.67
PCDHA1-201ENST00000378133 IMMTQ16891 758 aaKnown RBP19.24■□□□□ 0.67
PCDHA1-201ENST00000378133 NBPF11Q86T75 865 aa19.24■□□□□ 0.67
PCDHA1-201ENST00000378133 IMPACTQ9P2X3 320 aa19.24■□□□□ 0.67
PCDHA1-201ENST00000378133 EVCP57679 992 aa19.24■□□□□ 0.67
PCDHA1-201ENST00000378133 FMR1NBQ8N0W7 255 aaPredicted RBP19.24■□□□□ 0.67
PCDHA1-201ENST00000378133 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.24■□□□□ 0.67
PCDHA1-201ENST00000378133 PPP1R13BQ96KQ4 1090 aa19.24■□□□□ 0.67
PCDHA1-201ENST00000378133 GJB4Q9NTQ9 266 aa19.24■□□□□ 0.67
PCDHA1-201ENST00000378133 RTEL1Q9NZ71 1219 aa19.24■□□□□ 0.67
PCDHA1-201ENST00000378133 CLIC4Q9Y696 253 aa19.24■□□□□ 0.67
PCDHA1-201ENST00000378133 PCDH11XQ9BZA7 1347 aa19.23■□□□□ 0.67
PCDHA1-201ENST00000378133 PCDH11YQ9BZA8 1340 aa19.23■□□□□ 0.67
PCDHA1-201ENST00000378133 ERVV-2B6SEH9 535 aa19.23■□□□□ 0.67
PCDHA1-201ENST00000378133 ADALQ6DHV7 355 aa19.23■□□□□ 0.67
PCDHA1-201ENST00000378133 MRPS27Q92552 414 aaKnown RBP19.23■□□□□ 0.67
PCDHA1-201ENST00000378133 PUS7LQ9H0K6 701 aaKnown RBP19.23■□□□□ 0.67
PCDHA1-201ENST00000378133 FHOD1Q9Y613 1164 aa19.23■□□□□ 0.67
PCDHA1-201ENST00000378133 KLF18A0A0U1RQI7 1052 aa19.23■□□□□ 0.67
PCDHA1-201ENST00000378133 PRC1O43663 620 aa19.23■□□□□ 0.67
PCDHA1-201ENST00000378133 ZAP70P43403 619 aa19.23■□□□□ 0.67
PCDHA1-201ENST00000378133 CLCN6P51797 869 aa19.23■□□□□ 0.67
PCDHA1-201ENST00000378133 NDUFA8P51970 172 aa19.23■□□□□ 0.67
PCDHA1-201ENST00000378133 SF3A1Q15459 793 aaKnown RBP19.23■□□□□ 0.67
PCDHA1-201ENST00000378133 PI16Q6UXB8 463 aa19.23■□□□□ 0.67
PCDHA1-201ENST00000378133 FBXL16Q8N461 479 aa19.23■□□□□ 0.67
PCDHA1-201ENST00000378133 CHMP4CQ96CF2 233 aa19.23■□□□□ 0.67
PCDHA1-201ENST00000378133 C8orf76Q96K31 380 aa19.23■□□□□ 0.67
PCDHA1-201ENST00000378133 PLEKHG2Q9H7P9 1386 aa19.22■□□□□ 0.67
PCDHA1-201ENST00000378133 TJP1Q07157 1748 aa19.22■□□□□ 0.67
PCDHA1-201ENST00000378133 LINC00301Q8NCQ3 95 aa19.22■□□□□ 0.67
PCDHA1-201ENST00000378133 LRRN4CLQ8ND94 238 aa19.22■□□□□ 0.67
PCDHA1-201ENST00000378133 FAM89AQ96GI7 184 aa19.22■□□□□ 0.67
PCDHA1-201ENST00000378133 CPDO75976 1380 aa19.22■□□□□ 0.67
PCDHA1-201ENST00000378133 CYP2C19P33261 490 aa19.22■□□□□ 0.67
PCDHA1-201ENST00000378133 STK38Q15208 465 aa19.22■□□□□ 0.67
PCDHA1-201ENST00000378133 LRRFIP1Q32MZ4 808 aaKnown RBP19.22■□□□□ 0.67
PCDHA1-201ENST00000378133 CCDC93Q567U6 631 aa19.22■□□□□ 0.67
PCDHA1-201ENST00000378133 ORC3Q9UBD5 711 aaPredicted RBP19.22■□□□□ 0.67
PCDHA1-201ENST00000378133 AKAP2Q9Y2D5 859 aa19.22■□□□□ 0.67
PCDHA1-201ENST00000378133 ARHGAP29Q52LW3 1261 aa19.21■□□□□ 0.67
PCDHA1-201ENST00000378133 ISCA1Q9BUE6 129 aa19.21■□□□□ 0.67
PCDHA1-201ENST00000378133 NUP188Q5SRE5 1749 aa19.21■□□□□ 0.67
PCDHA1-201ENST00000378133 GOLGA8BA8MQT2 603 aa19.21■□□□□ 0.67
PCDHA1-201ENST00000378133 TCIRG1Q13488 830 aa19.21■□□□□ 0.67
PCDHA1-201ENST00000378133 HPS5Q9UPZ3 1129 aa19.21■□□□□ 0.67
PCDHA1-201ENST00000378133 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.21■□□□□ 0.67
PCDHA1-201ENST00000378133 PSDA5PKW4 1024 aaPredicted RBP19.2■□□□□ 0.66
PCDHA1-201ENST00000378133 SMC2O95347 1197 aa19.2■□□□□ 0.66
PCDHA1-201ENST00000378133 ZFYP08048 801 aaPredicted RBP19.2■□□□□ 0.66
PCDHA1-201ENST00000378133 TMC6Q7Z403 805 aa19.2■□□□□ 0.66
PCDHA1-201ENST00000378133 MB21D2Q8IYB1 491 aaPredicted RBP19.2■□□□□ 0.66
PCDHA1-201ENST00000378133 CCDC150Q8NCX0 1101 aa19.2■□□□□ 0.66
PCDHA1-201ENST00000378133 FBXO18Q8NFZ0 1043 aa19.2■□□□□ 0.66
PCDHA1-201ENST00000378133 PNMA6AP0CW24 399 aaPredicted RBP19.2■□□□□ 0.66
PCDHA1-201ENST00000378133 SFPQP23246 707 aaKnown RBP eCLIP19.2■□□□□ 0.66
PCDHA1-201ENST00000378133 ANTXR2P58335 489 aa19.2■□□□□ 0.66
PCDHA1-201ENST00000378133 ARMCX5Q6P1M9 558 aa19.2■□□□□ 0.66
PCDHA1-201ENST00000378133 PRDM11Q9NQV5 511 aa19.2■□□□□ 0.66
PCDHA1-201ENST00000378133 CPLX1O14810 134 aa19.19■□□□□ 0.66
PCDHA1-201ENST00000378133 HOMER1Q86YM7 354 aa19.19■□□□□ 0.66
PCDHA1-201ENST00000378133 APPBP2Q92624 585 aa19.19■□□□□ 0.66
PCDHA1-201ENST00000378133 XPO4Q9C0E2 1151 aaKnown RBP19.19■□□□□ 0.66
PCDHA1-201ENST00000378133 WDR17Q8IZU2 1322 aa19.19■□□□□ 0.66
PCDHA1-201ENST00000378133 A0A1W2PQ27 194 aa19.19■□□□□ 0.66
PCDHA1-201ENST00000378133 A0A1W2PQ64 194 aa19.19■□□□□ 0.66
PCDHA1-201ENST00000378133 A0A1W2PQD8 194 aa19.19■□□□□ 0.66
PCDHA1-201ENST00000378133 ZNF213O14771 459 aa19.19■□□□□ 0.66
PCDHA1-201ENST00000378133 NRDCO43847 1150 aa19.19■□□□□ 0.66
PCDHA1-201ENST00000378133 DHX16O60231 1041 aaKnown RBP19.19■□□□□ 0.66
PCDHA1-201ENST00000378133 ZRSR1Q15695 479 aaKnown RBP19.19■□□□□ 0.66
PCDHA1-201ENST00000378133 NCOA7Q8NI08 942 aa19.19■□□□□ 0.66
PCDHA1-201ENST00000378133 IFNKQ9P0W0 207 aa19.19■□□□□ 0.66
PCDHA1-201ENST00000378133 GPAA1O43292 621 aa19.18■□□□□ 0.66
PCDHA1-201ENST00000378133 RALYLQ86SE5 291 aaKnown RBP19.18■□□□□ 0.66
PCDHA1-201ENST00000378133 SYNE4Q8N205 404 aa19.18■□□□□ 0.66
PCDHA1-201ENST00000378133 KIAA1468Q9P260 1216 aa19.18■□□□□ 0.66
PCDHA1-201ENST00000378133 KCPQ6ZWJ8 1503 aa19.18■□□□□ 0.66
PCDHA1-201ENST00000378133 NWD2Q9ULI1 1742 aa19.18■□□□□ 0.66
PCDHA1-201ENST00000378133 SPTLC2O15270 562 aa19.18■□□□□ 0.66
PCDHA1-201ENST00000378133 TUBB4AP04350 444 aa19.18■□□□□ 0.66
PCDHA1-201ENST00000378133 PLA2G4AP47712 749 aa19.18■□□□□ 0.66
PCDHA1-201ENST00000378133 HNRNPH2P55795 449 aaKnown RBP19.18■□□□□ 0.66
PCDHA1-201ENST00000378133 MYSM1Q5VVJ2 828 aa19.18■□□□□ 0.66
PCDHA1-201ENST00000378133 TAOK2Q9UL54 1235 aa19.18■□□□□ 0.66
PCDHA1-201ENST00000378133 SPEF2Q9C093 1822 aa19.17■□□□□ 0.66
PCDHA1-201ENST00000378133 IFIT5Q13325 482 aaKnown RBP19.17■□□□□ 0.66
PCDHA1-201ENST00000378133 DPCR1Q3MIW9 517 aa19.17■□□□□ 0.66
PCDHA1-201ENST00000378133 KCNG4Q8TDN1 519 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms