RNA–Protein interactions for RNA: ENST00000372542.5

SNX21-204, Transcript of sorting nexin family member 21, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX21, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-204ENST00000372542 CARMIL3Q8ND23 1372 aa27.93■■■□□ 2.06
SNX21-204ENST00000372542 SEMA3EO15041 775 aa27.93■■■□□ 2.06
SNX21-204ENST00000372542 LRSAM1Q6UWE0 723 aa27.93■■■□□ 2.06
SNX21-204ENST00000372542 FAM196AQ6ZSG2 479 aa27.92■■■□□ 2.06
SNX21-204ENST00000372542 DENND2AQ9ULE3 1009 aa27.92■■■□□ 2.06
SNX21-204ENST00000372542 PTPDC1A2A3K4 754 aa27.92■■■□□ 2.06
SNX21-204ENST00000372542 H3BQV1 296 aa27.92■■■□□ 2.06
SNX21-204ENST00000372542 IFFO2Q5TF58 517 aa27.92■■■□□ 2.06
SNX21-204ENST00000372542 NAA16Q6N069 864 aaPredicted RBP27.92■■■□□ 2.06
SNX21-204ENST00000372542 AMIGO3Q86WK7 504 aa27.92■■■□□ 2.06
SNX21-204ENST00000372542 PANK2Q9BZ23 570 aa27.92■■■□□ 2.06
SNX21-204ENST00000372542 NBPF3Q9H094 633 aa27.92■■■□□ 2.06
SNX21-204ENST00000372542 ZSCAN16Q9H4T2 348 aaPredicted RBP27.92■■■□□ 2.06
SNX21-204ENST00000372542 QTRT2Q9H974 415 aaKnown RBP27.92■■■□□ 2.06
SNX21-204ENST00000372542 ELP1O95163 1332 aa27.91■■■□□ 2.06
SNX21-204ENST00000372542 DHX16O60231 1041 aaKnown RBP27.91■■■□□ 2.06
SNX21-204ENST00000372542 CTDNEP1O95476 244 aa27.91■■■□□ 2.06
SNX21-204ENST00000372542 ANTXR2P58335 489 aa27.91■■■□□ 2.06
SNX21-204ENST00000372542 VPS37DQ86XT2 251 aa27.91■■■□□ 2.06
SNX21-204ENST00000372542 IFNL3Q8IZI9 196 aa27.91■■■□□ 2.06
SNX21-204ENST00000372542 KLHL34Q8N239 644 aa27.91■■■□□ 2.06
SNX21-204ENST00000372542 NACAP1Q9BZK3 213 aa27.91■■■□□ 2.06
SNX21-204ENST00000372542 NAPBQ9H115 298 aa27.91■■■□□ 2.06
SNX21-204ENST00000372542 NAP1L2Q9ULW6 460 aaPredicted RBP27.91■■■□□ 2.06
SNX21-204ENST00000372542 SALL1Q9NSC2 1324 aa27.91■■■□□ 2.06
SNX21-204ENST00000372542 GYG1P46976 350 aa27.9■■■□□ 2.06
SNX21-204ENST00000372542 CCT2P78371 535 aaKnown RBP27.9■■■□□ 2.06
SNX21-204ENST00000372542 DDX11Q96FC9 970 aa27.9■■■□□ 2.06
SNX21-204ENST00000372542 PDS5AQ29RF7 1337 aaKnown RBP27.9■■■□□ 2.06
SNX21-204ENST00000372542 FERMT3Q86UX7 667 aa27.9■■■□□ 2.06
SNX21-204ENST00000372542 TBC1D10CQ8IV04 446 aa27.9■■■□□ 2.06
SNX21-204ENST00000372542 SCAND2PQ9GZW5 306 aaPredicted RBP27.9■■■□□ 2.06
SNX21-204ENST00000372542 ARMT1Q9H993 441 aa27.9■■■□□ 2.06
SNX21-204ENST00000372542 TIAM2Q8IVF5 1701 aa27.89■■■□□ 2.06
SNX21-204ENST00000372542 ZBTB22O15209 634 aa27.89■■■□□ 2.06
SNX21-204ENST00000372542 HMGB2P26583 209 aaKnown RBP27.89■■■□□ 2.06
SNX21-204ENST00000372542 SLC27A3Q5K4L6 730 aa27.89■■■□□ 2.06
SNX21-204ENST00000372542 FBXO33Q7Z6M2 555 aa27.89■■■□□ 2.06
SNX21-204ENST00000372542 SYCE3A1L190 88 aa27.88■■■□□ 2.05
SNX21-204ENST00000372542 NPHP1O15259 732 aa27.88■■■□□ 2.05
SNX21-204ENST00000372542 FAM84BQ96KN1 310 aaPredicted RBP27.88■■■□□ 2.05
SNX21-204ENST00000372542 EPB41L4AQ9HCS5 686 aaPredicted RBP27.88■■■□□ 2.05
SNX21-204ENST00000372542 CHD4Q14839 1912 aa27.88■■■□□ 2.05
SNX21-204ENST00000372542 KLF18A0A0U1RQI7 1052 aa27.88■■■□□ 2.05
SNX21-204ENST00000372542 LETM1O95202 739 aaPredicted RBP27.88■■■□□ 2.05
SNX21-204ENST00000372542 NASPP49321 788 aaPredicted RBP27.88■■■□□ 2.05
SNX21-204ENST00000372542 RESTQ13127 1097 aa27.88■■■□□ 2.05
SNX21-204ENST00000372542 CCDC183Q5T5S1 534 aa27.88■■■□□ 2.05
SNX21-204ENST00000372542 TMEM87BQ96K49 555 aa27.88■■■□□ 2.05
SNX21-204ENST00000372542 UBR3Q6ZT12 1888 aa27.87■■■□□ 2.05
SNX21-204ENST00000372542 GSG1L2A8MUP6 293 aa27.87■■■□□ 2.05
SNX21-204ENST00000372542 TM4SF1P30408 202 aa27.87■■■□□ 2.05
SNX21-204ENST00000372542 CNNM2Q9H8M5 875 aa27.87■■■□□ 2.05
SNX21-204ENST00000372542 LRRC4BQ9NT99 713 aa27.87■■■□□ 2.05
SNX21-204ENST00000372542 CYP7A1P22680 504 aa27.86■■■□□ 2.05
SNX21-204ENST00000372542 NFIXQ14938 502 aa27.86■■■□□ 2.05
SNX21-204ENST00000372542 NCOA5Q9HCD5 579 aaKnown RBP27.86■■■□□ 2.05
SNX21-204ENST00000372542 ANGEL1Q9UNK9 670 aaKnown RBP27.86■■■□□ 2.05
SNX21-204ENST00000372542 SLC4A4Q9Y6R1 1079 aa27.86■■■□□ 2.05
SNX21-204ENST00000372542 COL1A1P02452 1464 aaPredicted RBP27.86■■■□□ 2.05
SNX21-204ENST00000372542 TNRC6CQ9HCJ0 1690 aaKnown RBP27.86■■■□□ 2.05
SNX21-204ENST00000372542 LCORLQ8N3X6 602 aa27.85■■■□□ 2.05
SNX21-204ENST00000372542 GPHNQ9NQX3 736 aaPredicted RBP27.85■■■□□ 2.05
SNX21-204ENST00000372542 RAI14Q9P0K7 980 aa27.85■■■□□ 2.05
SNX21-204ENST00000372542 GOLGA8BA8MQT2 603 aa27.85■■■□□ 2.05
SNX21-204ENST00000372542 ABCF2Q9UG63 623 aa27.85■■■□□ 2.05
SNX21-204ENST00000372542 IQSEC3Q9UPP2 1182 aaPredicted RBP27.85■■■□□ 2.05
SNX21-204ENST00000372542 MYH13Q9UKX3 1938 aa27.84■■■□□ 2.05
SNX21-204ENST00000372542 TMED8Q6PL24 325 aaPredicted RBP27.84■■■□□ 2.05
SNX21-204ENST00000372542 CNBD1Q8NA66 436 aa27.84■■■□□ 2.05
SNX21-204ENST00000372542 ANP32BQ92688 251 aaKnown RBP27.84■■■□□ 2.05
SNX21-204ENST00000372542 KRT23Q9C075 422 aa27.84■■■□□ 2.05
SNX21-204ENST00000372542 SH2B2O14492 632 aaPredicted RBP27.83■■■□□ 2.05
SNX21-204ENST00000372542 TDO2P48775 406 aa27.83■■■□□ 2.05
SNX21-204ENST00000372542 RGS22Q8NE09 1264 aa27.83■■■□□ 2.05
SNX21-204ENST00000372542 HPS5Q9UPZ3 1129 aa27.83■■■□□ 2.05
SNX21-204ENST00000372542 CACNA1SQ13698 1873 aa27.83■■■□□ 2.05
SNX21-204ENST00000372542 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.83■■■□□ 2.05
SNX21-204ENST00000372542 AKNAD1Q5T1N1 836 aa27.83■■■□□ 2.05
SNX21-204ENST00000372542 CYB5R4Q7L1T6 521 aa27.83■■■□□ 2.05
SNX21-204ENST00000372542 KRT27Q7Z3Y8 459 aa27.83■■■□□ 2.05
SNX21-204ENST00000372542 TTC6Q86TZ1 520 aa27.83■■■□□ 2.05
SNX21-204ENST00000372542 MAGEB6P1A0A0J9YX57 407 aa27.82■■■□□ 2.04
SNX21-204ENST00000372542 HIBADHP31937 336 aaKnown RBP27.82■■■□□ 2.04
SNX21-204ENST00000372542 STAG1Q8WVM7 1258 aa27.82■■■□□ 2.04
SNX21-204ENST00000372542 MYH15Q9Y2K3 1946 aa27.81■■■□□ 2.04
SNX21-204ENST00000372542 B4E1Z4 1266 aa27.81■■■□□ 2.04
SNX21-204ENST00000372542 GRAPQ13588 217 aa27.81■■■□□ 2.04
SNX21-204ENST00000372542 ATL3Q6DD88 541 aa27.81■■■□□ 2.04
SNX21-204ENST00000372542 AEBP2Q6ZN18 517 aaPredicted RBP27.81■■■□□ 2.04
SNX21-204ENST00000372542 CCDC24Q8N4L8 307 aa27.81■■■□□ 2.04
SNX21-204ENST00000372542 GRAPLQ8TC17 118 aaPredicted RBP27.81■■■□□ 2.04
SNX21-204ENST00000372542 SPATA32Q96LK8 384 aa27.81■■■□□ 2.04
SNX21-204ENST00000372542 RBSNQ9H1K0 784 aa27.81■■■□□ 2.04
SNX21-204ENST00000372542 CFAP45Q9UL16 551 aa27.81■■■□□ 2.04
SNX21-204ENST00000372542 NEDD4P46934 1319 aa27.81■■■□□ 2.04
SNX21-204ENST00000372542 BRWD3Q6RI45 1802 aa27.81■■■□□ 2.04
SNX21-204ENST00000372542 MTA3Q9BTC8 594 aa27.81■■■□□ 2.04
SNX21-204ENST00000372542 TSPY26PQ9H489 355 aa27.81■■■□□ 2.04
SNX21-204ENST00000372542 RNF41Q9H4P4 317 aaPredicted RBP27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms