RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 USP16Q9Y5T5 823 aa17.12■□□□□ 0.33
GTF3C4-201ENST00000372146 GOLGA5Q8TBA6 731 aa17.12■□□□□ 0.33
GTF3C4-201ENST00000372146 POLE2P56282 527 aa17.12■□□□□ 0.33
GTF3C4-201ENST00000372146 DNM1Q05193 864 aaKnown RBP17.12■□□□□ 0.33
GTF3C4-201ENST00000372146 RNF41Q9H4P4 317 aaPredicted RBP17.11■□□□□ 0.33
GTF3C4-201ENST00000372146 PALM3A6NDB9 673 aaPredicted RBP17.11■□□□□ 0.33
GTF3C4-201ENST00000372146 ASIC1P78348 528 aa17.11■□□□□ 0.33
GTF3C4-201ENST00000372146 UBL4BQ8N7F7 174 aa17.11■□□□□ 0.33
GTF3C4-201ENST00000372146 CABP4P57796 275 aa17.11■□□□□ 0.33
GTF3C4-201ENST00000372146 YY1AP1Q9H869 796 aa17.11■□□□□ 0.33
GTF3C4-201ENST00000372146 FAM13AO94988 1023 aa17.11■□□□□ 0.33
GTF3C4-201ENST00000372146 KIFC2Q96AC6 838 aa17.11■□□□□ 0.33
GTF3C4-201ENST00000372146 IMPG2Q9BZV3 1241 aa17.11■□□□□ 0.33
GTF3C4-201ENST00000372146 ABTB2Q8N961 1025 aa17.11■□□□□ 0.33
GTF3C4-201ENST00000372146 SDCCAG3Q96C92 435 aa17.1■□□□□ 0.33
GTF3C4-201ENST00000372146 TBC1D8O95759 1140 aa17.1■□□□□ 0.33
GTF3C4-201ENST00000372146 PPP4R1Q8TF05 950 aa17.1■□□□□ 0.33
GTF3C4-201ENST00000372146 CACYBPQ9HB71 228 aaKnown RBP17.1■□□□□ 0.33
GTF3C4-201ENST00000372146 ERMNQ8TAM6 284 aa17.1■□□□□ 0.33
GTF3C4-201ENST00000372146 EFCC1Q9HA90 598 aa17.1■□□□□ 0.33
GTF3C4-201ENST00000372146 ORC3Q9UBD5 711 aaPredicted RBP17.1■□□□□ 0.33
GTF3C4-201ENST00000372146 FGD6Q6ZV73 1430 aa17.1■□□□□ 0.33
GTF3C4-201ENST00000372146 CA8P35219 290 aa17.1■□□□□ 0.33
GTF3C4-201ENST00000372146 LEO1Q8WVC0 666 aaPredicted RBP17.1■□□□□ 0.33
GTF3C4-201ENST00000372146 CENPKQ9BS16 269 aa17.1■□□□□ 0.33
GTF3C4-201ENST00000372146 RRAGDQ9NQL2 400 aaPredicted RBP17.1■□□□□ 0.33
GTF3C4-201ENST00000372146 KLHL14Q9P2G3 628 aa17.1■□□□□ 0.33
GTF3C4-201ENST00000372146 RPAP2Q8IXW5 612 aaPredicted RBP17.1■□□□□ 0.33
GTF3C4-201ENST00000372146 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.1■□□□□ 0.33
GTF3C4-201ENST00000372146 DDX41Q9UJV9 622 aaKnown RBP17.1■□□□□ 0.33
GTF3C4-201ENST00000372146 RILPL1Q5EBL4 403 aa17.09■□□□□ 0.33
GTF3C4-201ENST00000372146 VAT1LQ9HCJ6 419 aa17.09■□□□□ 0.33
GTF3C4-201ENST00000372146 AMOTQ4VCS5 1084 aa17.09■□□□□ 0.33
GTF3C4-201ENST00000372146 HDAC9Q9UKV0 1011 aa17.09■□□□□ 0.33
GTF3C4-201ENST00000372146 TUBB2AQ13885 445 aa17.09■□□□□ 0.33
GTF3C4-201ENST00000372146 TUBB2BQ9BVA1 445 aa17.09■□□□□ 0.33
GTF3C4-201ENST00000372146 LRRC9Q6ZRR7 1453 aa17.09■□□□□ 0.33
GTF3C4-201ENST00000372146 GPRASP1Q5JY77 1395 aa17.09■□□□□ 0.33
GTF3C4-201ENST00000372146 IFIT1P09914 478 aaKnown RBP17.09■□□□□ 0.33
GTF3C4-201ENST00000372146 C16orf87Q6PH81 154 aa17.09■□□□□ 0.33
GTF3C4-201ENST00000372146 ZBTB41Q5SVQ8 909 aa17.09■□□□□ 0.33
GTF3C4-201ENST00000372146 C17orf53Q8N3J3 647 aaPredicted RBP17.09■□□□□ 0.33
GTF3C4-201ENST00000372146 KRT15P19012 456 aa17.08■□□□□ 0.33
GTF3C4-201ENST00000372146 SATB2Q9UPW6 733 aa17.08■□□□□ 0.33
GTF3C4-201ENST00000372146 KRT3P12035 628 aa17.08■□□□□ 0.33
GTF3C4-201ENST00000372146 CYP26C1Q6V0L0 522 aa17.08■□□□□ 0.33
GTF3C4-201ENST00000372146 TMX3Q96JJ7 454 aa17.08■□□□□ 0.33
GTF3C4-201ENST00000372146 ATP1A2P50993 1020 aa17.08■□□□□ 0.33
GTF3C4-201ENST00000372146 SRGAP1Q7Z6B7 1085 aa17.08■□□□□ 0.33
GTF3C4-201ENST00000372146 SIRT1Q96EB6 747 aa17.08■□□□□ 0.33
GTF3C4-201ENST00000372146 RBSNQ9H1K0 784 aa17.08■□□□□ 0.33
GTF3C4-201ENST00000372146 HAUS1Q96CS2 278 aa17.08■□□□□ 0.32
GTF3C4-201ENST00000372146 GFAPP14136 432 aa17.08■□□□□ 0.32
GTF3C4-201ENST00000372146 ZFXP17010 805 aaPredicted RBP17.08■□□□□ 0.32
GTF3C4-201ENST00000372146 MAP3K12Q12852 859 aa17.08■□□□□ 0.32
GTF3C4-201ENST00000372146 HELBQ8NG08 1087 aaPredicted RBP17.08■□□□□ 0.32
GTF3C4-201ENST00000372146 CAPS2Q9BXY5 557 aa17.08■□□□□ 0.32
GTF3C4-201ENST00000372146 PSPC1Q8WXF1 523 aaKnown RBP17.08■□□□□ 0.32
GTF3C4-201ENST00000372146 TRIM6Q9C030 488 aaPredicted RBP17.08■□□□□ 0.32
GTF3C4-201ENST00000372146 PIP4K2CQ8TBX8 421 aa17.08■□□□□ 0.32
GTF3C4-201ENST00000372146 CAVIN4Q5BKX8 364 aa17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 GRAMD4Q6IC98 578 aa17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 CARD6Q9BX69 1037 aa17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 EEF1DP29692 281 aaKnown RBP17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 GNGT1P63211 74 aa17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 MTMR3Q13615 1198 aa17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 SLMAPQ14BN4 828 aa17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 C20orf194Q5TEA3 1177 aa17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 GDAP1L1Q96MZ0 367 aa17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 CTNND2Q9UQB3 1225 aa17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 RAPGEF1Q13905 1077 aa17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 DCAF17Q5H9S7 520 aaPredicted RBP17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 SCOCQ9UIL1 159 aa17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 MYOM3Q5VTT5 1437 aa17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 RNF40O75150 1001 aa17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 NXNQ6DKJ4 435 aa17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 SULT6B1Q6IMI4 303 aa17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 MSANTD4Q8NCY6 345 aa17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 DRC3Q9H069 523 aa17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 CTTNBP2NLQ9P2B4 639 aa17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 AFG3L2Q9Y4W6 797 aa17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 SPOPO43791 374 aa17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 CCDC93Q567U6 631 aa17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 EVI5LQ96CN4 794 aa17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 TSC22D3Q99576 134 aa17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 STX2P32856 288 aa17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 LONP1P36776 959 aaKnown RBP17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 ESRRGP62508 458 aa17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 GJC2Q5T442 439 aaPredicted RBP17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 CNPY4Q8N129 248 aa17.07■□□□□ 0.32
GTF3C4-201ENST00000372146 TROVE2P10155 538 aaKnown RBP eCLIP17.06■□□□□ 0.32
GTF3C4-201ENST00000372146 PTPRGP23470 1445 aa17.06■□□□□ 0.32
GTF3C4-201ENST00000372146 SERPINI2O75830 405 aa17.06■□□□□ 0.32
GTF3C4-201ENST00000372146 STX17P56962 302 aa17.06■□□□□ 0.32
GTF3C4-201ENST00000372146 MFSD6Q6ZSS7 791 aa17.06■□□□□ 0.32
GTF3C4-201ENST00000372146 DHX58Q96C10 678 aa17.06■□□□□ 0.32
GTF3C4-201ENST00000372146 CLSTN2Q9H4D0 955 aa17.06■□□□□ 0.32
GTF3C4-201ENST00000372146 ANKIB1Q9P2G1 1089 aa17.06■□□□□ 0.32
GTF3C4-201ENST00000372146 PPP2R5DQ14738 602 aa17.06■□□□□ 0.32
GTF3C4-201ENST00000372146 ZKSCAN8Q15776 578 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms