RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 IFNL1Q8IU54 200 aa20.12■□□□□ 0.81
CKS1B-202ENST00000368436 KLHDC4Q8TBB5 520 aa20.12■□□□□ 0.81
CKS1B-202ENST00000368436 TEPSINQ96N21 525 aa20.12■□□□□ 0.81
CKS1B-202ENST00000368436 FKTNO75072 461 aa20.11■□□□□ 0.81
CKS1B-202ENST00000368436 SOX10P56693 466 aa20.11■□□□□ 0.81
CKS1B-202ENST00000368436 VPS37DQ86XT2 251 aa20.11■□□□□ 0.81
CKS1B-202ENST00000368436 ANKRD13AQ8IZ07 590 aa20.11■□□□□ 0.81
CKS1B-202ENST00000368436 TRMT2AQ8IZ69 625 aaKnown RBP20.11■□□□□ 0.81
CKS1B-202ENST00000368436 TBC1D22AQ8WUA7 517 aa20.11■□□□□ 0.81
CKS1B-202ENST00000368436 IQSEC3Q9UPP2 1182 aaPredicted RBP20.11■□□□□ 0.81
CKS1B-202ENST00000368436 KIF16BQ96L93 1317 aa20.1■□□□□ 0.81
CKS1B-202ENST00000368436 FGFR2P21802 821 aa20.1■□□□□ 0.81
CKS1B-202ENST00000368436 RFX5P48382 616 aaPredicted RBP20.1■□□□□ 0.81
CKS1B-202ENST00000368436 CDCA7LQ96GN5 454 aa20.1■□□□□ 0.81
CKS1B-202ENST00000368436 MRIQ9BWK5 157 aa20.1■□□□□ 0.81
CKS1B-202ENST00000368436 MYH13Q9UKX3 1938 aa20.1■□□□□ 0.81
CKS1B-202ENST00000368436 IGF2BP3O00425 579 aaKnown RBP eCLIP20.09■□□□□ 0.81
CKS1B-202ENST00000368436 GJA5P36382 358 aa20.09■□□□□ 0.81
CKS1B-202ENST00000368436 BCAMP50895 628 aa20.09■□□□□ 0.81
CKS1B-202ENST00000368436 CHAF1AQ13111 956 aaPredicted RBP20.09■□□□□ 0.81
CKS1B-202ENST00000368436 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.09■□□□□ 0.81
CKS1B-202ENST00000368436 PUM3Q15397 648 aaKnown RBP20.08■□□□□ 0.81
CKS1B-202ENST00000368436 FBXO46Q6PJ61 603 aaPredicted RBP20.08■□□□□ 0.81
CKS1B-202ENST00000368436 CDAN1Q8IWY9 1227 aa20.08■□□□□ 0.81
CKS1B-202ENST00000368436 TESPA1A2RU30 521 aaPredicted RBP20.07■□□□□ 0.8
CKS1B-202ENST00000368436 TCP10L2B9ZVM9 353 aa20.07■□□□□ 0.8
CKS1B-202ENST00000368436 EYA2O00167 538 aa20.07■□□□□ 0.8
CKS1B-202ENST00000368436 FRAT2O75474 233 aaPredicted RBP20.07■□□□□ 0.8
CKS1B-202ENST00000368436 TNNI2P48788 182 aa20.07■□□□□ 0.8
CKS1B-202ENST00000368436 TMEM39BQ9GZU3 492 aa20.07■□□□□ 0.8
CKS1B-202ENST00000368436 SUGT1Q9Y2Z0 365 aa20.07■□□□□ 0.8
CKS1B-202ENST00000368436 TNRC18O15417 2968 aaPredicted RBP20.07■□□□□ 0.8
CKS1B-202ENST00000368436 IFIT1P09914 478 aaKnown RBP20.06■□□□□ 0.8
CKS1B-202ENST00000368436 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.06■□□□□ 0.8
CKS1B-202ENST00000368436 TEKT1Q969V4 418 aa20.06■□□□□ 0.8
CKS1B-202ENST00000368436 ZDHHC15Q96MV8 337 aa20.06■□□□□ 0.8
CKS1B-202ENST00000368436 SMC4Q9NTJ3 1288 aa20.06■□□□□ 0.8
CKS1B-202ENST00000368436 CT47B1P0C2W7 299 aaPredicted RBP20.05■□□□□ 0.8
CKS1B-202ENST00000368436 OTUD7BQ6GQQ9 843 aa20.05■□□□□ 0.8
CKS1B-202ENST00000368436 ATG9AQ7Z3C6 839 aa20.05■□□□□ 0.8
CKS1B-202ENST00000368436 OPTNQ96CV9 577 aa20.05■□□□□ 0.8
CKS1B-202ENST00000368436 PTPN18Q99952 460 aa20.05■□□□□ 0.8
CKS1B-202ENST00000368436 ELP3Q9H9T3 547 aa20.05■□□□□ 0.8
CKS1B-202ENST00000368436 MAP3K9P80192 1104 aa20.04■□□□□ 0.8
CKS1B-202ENST00000368436 FKBP1CQ5VVH2 108 aa20.04■□□□□ 0.8
CKS1B-202ENST00000368436 APOBEC3HQ6NTF7 200 aaKnown RBP20.04■□□□□ 0.8
CKS1B-202ENST00000368436 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.04■□□□□ 0.8
CKS1B-202ENST00000368436 LPIN2Q92539 896 aa20.04■□□□□ 0.8
CKS1B-202ENST00000368436 FBXO3Q9UK99 471 aa20.04■□□□□ 0.8
CKS1B-202ENST00000368436 MAST3O60307 1309 aa20.03■□□□□ 0.8
CKS1B-202ENST00000368436 SLC5A1P13866 664 aa20.03■□□□□ 0.8
CKS1B-202ENST00000368436 HHIPL2Q6UWX4 724 aa20.03■□□□□ 0.8
CKS1B-202ENST00000368436 FAM83AQ86UY5 434 aa20.03■□□□□ 0.8
CKS1B-202ENST00000368436 MS4A4AQ96JQ5 239 aa20.03■□□□□ 0.8
CKS1B-202ENST00000368436 NOB1Q9ULX3 412 aaKnown RBP20.03■□□□□ 0.8
CKS1B-202ENST00000368436 UBTFL1P0CB47 393 aaPredicted RBP20.02■□□□□ 0.8
CKS1B-202ENST00000368436 CACNB3P54284 484 aa20.02■□□□□ 0.8
CKS1B-202ENST00000368436 CRHR2Q13324 411 aa20.02■□□□□ 0.8
CKS1B-202ENST00000368436 VGLL4Q14135 290 aa20.02■□□□□ 0.8
CKS1B-202ENST00000368436 PDE4DIPQ5VU43 2346 aa20.02■□□□□ 0.79
CKS1B-202ENST00000368436 CIAO1O76071 339 aa20.01■□□□□ 0.79
CKS1B-202ENST00000368436 OTOP1Q7RTM1 612 aa20.01■□□□□ 0.79
CKS1B-202ENST00000368436 WDR66Q8TBY9 1149 aa20.01■□□□□ 0.79
CKS1B-202ENST00000368436 CNKSR2Q8WXI2 1034 aa20.01■□□□□ 0.79
CKS1B-202ENST00000368436 ERO1AQ96HE7 468 aa20■□□□□ 0.79
CKS1B-202ENST00000368436 API5Q9BZZ5 524 aaKnown RBP20■□□□□ 0.79
CKS1B-202ENST00000368436 TMOD2Q9NZR1 351 aa20■□□□□ 0.79
CKS1B-202ENST00000368436 TRIM17Q9Y577 477 aa20■□□□□ 0.79
CKS1B-202ENST00000368436 CSADQ9Y600 493 aa20■□□□□ 0.79
CKS1B-202ENST00000368436 SLC34A2O95436 690 aa19.99■□□□□ 0.79
CKS1B-202ENST00000368436 GTF2A2P52657 109 aa19.99■□□□□ 0.79
CKS1B-202ENST00000368436 BRI3BPQ8WY22 251 aa19.99■□□□□ 0.79
CKS1B-202ENST00000368436 HOOK2Q96ED9 719 aa19.99■□□□□ 0.79
CKS1B-202ENST00000368436 HDAC5Q9UQL6 1122 aa19.99■□□□□ 0.79
CKS1B-202ENST00000368436 RPAP1Q9BWH6 1393 aaPredicted RBP19.98■□□□□ 0.79
CKS1B-202ENST00000368436 SPDYE5A6NIY4 337 aa19.98■□□□□ 0.79
CKS1B-202ENST00000368436 ZBTB22O15209 634 aa19.98■□□□□ 0.79
CKS1B-202ENST00000368436 ATP2B3Q16720 1220 aa19.98■□□□□ 0.79
CKS1B-202ENST00000368436 SIL1Q9H173 461 aa19.98■□□□□ 0.79
CKS1B-202ENST00000368436 CEP126Q9P2H0 1117 aa19.98■□□□□ 0.79
CKS1B-202ENST00000368436 SNCAIPQ9Y6H5 919 aa19.98■□□□□ 0.79
CKS1B-202ENST00000368436 CCL15-CCL14A0A0B4J2E2 113 aa19.97■□□□□ 0.79
CKS1B-202ENST00000368436 CCER2I3L3R5 266 aa19.97■□□□□ 0.79
CKS1B-202ENST00000368436 IL15P40933 162 aaPredicted RBP19.97■□□□□ 0.79
CKS1B-202ENST00000368436 SP3Q02447 781 aa19.97■□□□□ 0.79
CKS1B-202ENST00000368436 CCL15Q16663 113 aa19.97■□□□□ 0.79
CKS1B-202ENST00000368436 CD99L2Q8TCZ2 262 aa19.97■□□□□ 0.79
CKS1B-202ENST00000368436 OTUD5Q96G74 571 aa19.97■□□□□ 0.79
CKS1B-202ENST00000368436 PTPN22Q9Y2R2 807 aa19.97■□□□□ 0.79
CKS1B-202ENST00000368436 LRRFIP2Q9Y608 721 aaKnown RBP19.97■□□□□ 0.79
CKS1B-202ENST00000368436 ERO1BQ86YB8 467 aa19.96■□□□□ 0.79
CKS1B-202ENST00000368436 COPRSQ9NQ92 184 aa19.96■□□□□ 0.79
CKS1B-202ENST00000368436 DAGLAQ9Y4D2 1042 aa19.96■□□□□ 0.79
CKS1B-202ENST00000368436 SALL1Q9NSC2 1324 aa19.96■□□□□ 0.79
CKS1B-202ENST00000368436 RBBP6Q7Z6E9 1792 aaKnown RBP19.95■□□□□ 0.78
CKS1B-202ENST00000368436 SEMA3EO15041 775 aa19.95■□□□□ 0.78
CKS1B-202ENST00000368436 RARSP54136 660 aaKnown RBP19.95■□□□□ 0.78
CKS1B-202ENST00000368436 CAP1Q01518 475 aa19.95■□□□□ 0.78
CKS1B-202ENST00000368436 DCAF15Q66K64 600 aa19.95■□□□□ 0.78
CKS1B-202ENST00000368436 FAM43AQ8N2R8 423 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms