RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 URB2Q14146 1524 aaKnown RBP26.01■■□□□ 1.75
NPAS3-201ENST00000346562 IQUBQ8NA54 791 aa26.01■■□□□ 1.75
NPAS3-201ENST00000346562 ARHGEF10LQ9HCE6 1279 aa26.01■■□□□ 1.75
NPAS3-201ENST00000346562 HELLSQ9NRZ9 838 aa26.01■■□□□ 1.75
NPAS3-201ENST00000346562 SH3BP5O60239 455 aa26■■□□□ 1.75
NPAS3-201ENST00000346562 MAST3O60307 1309 aa26■■□□□ 1.75
NPAS3-201ENST00000346562 DYNC1I1O14576 645 aa26■■□□□ 1.75
NPAS3-201ENST00000346562 CCDC114Q96M63 670 aa26■■□□□ 1.75
NPAS3-201ENST00000346562 MAP3K1Q13233 1512 aa26■■□□□ 1.75
NPAS3-201ENST00000346562 SMTNP53814 917 aa26■■□□□ 1.75
NPAS3-201ENST00000346562 NOD1Q9Y239 953 aa26■■□□□ 1.75
NPAS3-201ENST00000346562 STK24Q9Y6E0 443 aa26■■□□□ 1.75
NPAS3-201ENST00000346562 DNM1Q05193 864 aaKnown RBP26■■□□□ 1.75
NPAS3-201ENST00000346562 MTHFSDQ2M296 383 aaKnown RBP26■■□□□ 1.75
NPAS3-201ENST00000346562 DCAF17Q5H9S7 520 aaPredicted RBP25.99■■□□□ 1.75
NPAS3-201ENST00000346562 CREB3L3Q68CJ9 461 aa25.99■■□□□ 1.75
NPAS3-201ENST00000346562 SBDSQ9Y3A5 250 aaKnown RBP eCLIP25.99■■□□□ 1.75
NPAS3-201ENST00000346562 PTPDC1A2A3K4 754 aa25.99■■□□□ 1.75
NPAS3-201ENST00000346562 ZWINTO95229 277 aa25.99■■□□□ 1.75
NPAS3-201ENST00000346562 TERF1P54274 439 aa25.99■■□□□ 1.75
NPAS3-201ENST00000346562 CFAP157Q5JU67 520 aa25.99■■□□□ 1.75
NPAS3-201ENST00000346562 TIGD1Q96MW7 591 aa25.99■■□□□ 1.75
NPAS3-201ENST00000346562 TNNC1P63316 161 aa25.99■■□□□ 1.75
NPAS3-201ENST00000346562 DHX32Q7L7V1 743 aaKnown RBP25.99■■□□□ 1.75
NPAS3-201ENST00000346562 TEX11Q8IYF3 940 aa25.99■■□□□ 1.75
NPAS3-201ENST00000346562 CNBD1Q8NA66 436 aa25.99■■□□□ 1.75
NPAS3-201ENST00000346562 C8orf58Q8NAV2 365 aa25.99■■□□□ 1.75
NPAS3-201ENST00000346562 HELBQ8NG08 1087 aaPredicted RBP25.99■■□□□ 1.75
NPAS3-201ENST00000346562 STK32BQ9NY57 414 aa25.99■■□□□ 1.75
NPAS3-201ENST00000346562 IVLP07476 585 aa25.99■■□□□ 1.75
NPAS3-201ENST00000346562 GNPATO15228 680 aa25.98■■□□□ 1.75
NPAS3-201ENST00000346562 KRT5P13647 590 aa25.98■■□□□ 1.75
NPAS3-201ENST00000346562 RAB3GAP1Q15042 981 aa25.98■■□□□ 1.75
NPAS3-201ENST00000346562 GJA3Q9Y6H8 435 aa25.98■■□□□ 1.75
NPAS3-201ENST00000346562 STX10O60499 249 aa25.98■■□□□ 1.75
NPAS3-201ENST00000346562 CCDC186Q7Z3E2 898 aa25.98■■□□□ 1.75
NPAS3-201ENST00000346562 LRRC59Q96AG4 307 aaKnown RBP25.98■■□□□ 1.75
NPAS3-201ENST00000346562 PLCD1P51178 756 aa25.98■■□□□ 1.75
NPAS3-201ENST00000346562 RAPGEF1Q13905 1077 aa25.98■■□□□ 1.75
NPAS3-201ENST00000346562 CDCA7Q9BWT1 371 aaPredicted RBP25.98■■□□□ 1.75
NPAS3-201ENST00000346562 SOS1Q07889 1333 aaPredicted RBP25.98■■□□□ 1.75
NPAS3-201ENST00000346562 BIRC3Q13489 604 aa25.98■■□□□ 1.75
NPAS3-201ENST00000346562 RUFY3Q7L099 469 aa25.97■■□□□ 1.75
NPAS3-201ENST00000346562 ATRIPQ8WXE1 791 aa25.97■■□□□ 1.75
NPAS3-201ENST00000346562 HOOK2Q96ED9 719 aa25.97■■□□□ 1.75
NPAS3-201ENST00000346562 DUOX2Q9NRD8 1548 aa25.97■■□□□ 1.75
NPAS3-201ENST00000346562 DKC1O60832 514 aaKnown RBP eCLIP25.97■■□□□ 1.75
NPAS3-201ENST00000346562 CALCOCO2Q13137 446 aa25.97■■□□□ 1.75
NPAS3-201ENST00000346562 KRT222Q8N1A0 295 aa25.97■■□□□ 1.75
NPAS3-201ENST00000346562 EXOC7Q9UPT5 735 aa25.97■■□□□ 1.75
NPAS3-201ENST00000346562 CEP128Q6ZU80 1094 aa25.97■■□□□ 1.75
NPAS3-201ENST00000346562 CSRNP2Q9H175 543 aa25.97■■□□□ 1.75
NPAS3-201ENST00000346562 SMC1BQ8NDV3 1235 aa25.97■■□□□ 1.75
NPAS3-201ENST00000346562 SAP30BPQ9UHR5 308 aaKnown RBP25.96■■□□□ 1.75
NPAS3-201ENST00000346562 ECM2O94769 699 aaPredicted RBP25.96■■□□□ 1.75
NPAS3-201ENST00000346562 DAAM2Q86T65 1068 aa25.96■■□□□ 1.75
NPAS3-201ENST00000346562 TPD52P55327 224 aaPredicted RBP25.96■■□□□ 1.75
NPAS3-201ENST00000346562 CAPZA3Q96KX2 299 aa25.96■■□□□ 1.75
NPAS3-201ENST00000346562 TRPM2O94759 1503 aa25.96■■□□□ 1.75
NPAS3-201ENST00000346562 UFL1O94874 794 aa25.96■■□□□ 1.75
NPAS3-201ENST00000346562 PARP10Q53GL7 1025 aa25.96■■□□□ 1.75
NPAS3-201ENST00000346562 IFT74Q96LB3 600 aa25.96■■□□□ 1.75
NPAS3-201ENST00000346562 GLT8D2Q9H1C3 349 aa25.96■■□□□ 1.75
NPAS3-201ENST00000346562 GUCA1BQ9UMX6 200 aa25.96■■□□□ 1.75
NPAS3-201ENST00000346562 STRN3Q13033 797 aa25.95■■□□□ 1.75
NPAS3-201ENST00000346562 VWA3BQ502W6 1294 aa25.95■■□□□ 1.75
NPAS3-201ENST00000346562 HAUS3Q68CZ6 603 aa25.95■■□□□ 1.75
NPAS3-201ENST00000346562 CERS3Q8IU89 383 aa25.95■■□□□ 1.75
NPAS3-201ENST00000346562 CALUO43852 315 aaPredicted RBP25.95■■□□□ 1.74
NPAS3-201ENST00000346562 MBD4O95243 580 aa25.95■■□□□ 1.74
NPAS3-201ENST00000346562 CCT6AP40227 531 aaKnown RBP25.95■■□□□ 1.74
NPAS3-201ENST00000346562 CHST3Q7LGC8 479 aa25.95■■□□□ 1.74
NPAS3-201ENST00000346562 GPHNQ9NQX3 736 aaPredicted RBP25.95■■□□□ 1.74
NPAS3-201ENST00000346562 AGTPBP1Q9UPW5 1226 aa25.95■■□□□ 1.74
NPAS3-201ENST00000346562 LUC7L2Q9Y383 392 aaKnown RBP25.95■■□□□ 1.74
NPAS3-201ENST00000346562 STX17P56962 302 aa25.95■■□□□ 1.74
NPAS3-201ENST00000346562 ATL3Q6DD88 541 aa25.95■■□□□ 1.74
NPAS3-201ENST00000346562 PKD2L1Q9P0L9 805 aa25.95■■□□□ 1.74
NPAS3-201ENST00000346562 FBLN1P23142 703 aa25.95■■□□□ 1.74
NPAS3-201ENST00000346562 RNF34Q969K3 372 aa25.95■■□□□ 1.74
NPAS3-201ENST00000346562 GMNNO75496 209 aa25.94■■□□□ 1.74
NPAS3-201ENST00000346562 CCT6BQ92526 530 aa25.94■■□□□ 1.74
NPAS3-201ENST00000346562 TRIM7Q9C029 511 aa25.94■■□□□ 1.74
NPAS3-201ENST00000346562 INF2Q27J81 1249 aa25.94■■□□□ 1.74
NPAS3-201ENST00000346562 ZFYVE9O95405 1425 aa25.94■■□□□ 1.74
NPAS3-201ENST00000346562 TYRO3Q06418 890 aa25.94■■□□□ 1.74
NPAS3-201ENST00000346562 AK2P54819 239 aa25.94■■□□□ 1.74
NPAS3-201ENST00000346562 CWF19L2Q2TBE0 894 aaKnown RBP25.94■■□□□ 1.74
NPAS3-201ENST00000346562 SNX21Q969T3 373 aa25.94■■□□□ 1.74
NPAS3-201ENST00000346562 KIFC2Q96AC6 838 aa25.94■■□□□ 1.74
NPAS3-201ENST00000346562 C19orf44Q9H6X5 657 aa25.94■■□□□ 1.74
NPAS3-201ENST00000346562 ABCC1P33527 1531 aa25.94■■□□□ 1.74
NPAS3-201ENST00000346562 NUP160Q12769 1436 aa25.93■■□□□ 1.74
NPAS3-201ENST00000346562 LETM2Q2VYF4 491 aa25.93■■□□□ 1.74
NPAS3-201ENST00000346562 CNGA4Q8IV77 575 aa25.93■■□□□ 1.74
NPAS3-201ENST00000346562 CDAN1Q8IWY9 1227 aa25.93■■□□□ 1.74
NPAS3-201ENST00000346562 CABLES1Q8TDN4 633 aa25.93■■□□□ 1.74
NPAS3-201ENST00000346562 PLIN2Q99541 437 aa25.93■■□□□ 1.74
NPAS3-201ENST00000346562 RNMTO43148 476 aaKnown RBP25.93■■□□□ 1.74
NPAS3-201ENST00000346562 CRCPO75575 148 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms