RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 HMGB1P09429 215 aaKnown RBP15.47■□□□□ 0.07
CASC4-202ENST00000345795 CYP19A1P11511 503 aaPredicted RBP15.47■□□□□ 0.07
CASC4-202ENST00000345795 SLC4A9Q96Q91 983 aa15.47■□□□□ 0.07
CASC4-202ENST00000345795 RTCBQ9Y3I0 505 aaKnown RBP15.47■□□□□ 0.07
CASC4-202ENST00000345795 UQCRHLA0A096LP55 91 aa15.47■□□□□ 0.07
CASC4-202ENST00000345795 FAM170AA1A519 330 aa15.47■□□□□ 0.07
CASC4-202ENST00000345795 UQCRHP07919 91 aa15.47■□□□□ 0.07
CASC4-202ENST00000345795 SLC51AQ86UW1 340 aa15.47■□□□□ 0.07
CASC4-202ENST00000345795 AOPEPQ8N6M6 819 aa15.47■□□□□ 0.07
CASC4-202ENST00000345795 RPGRQ92834 1020 aaKnown RBP15.47■□□□□ 0.07
CASC4-202ENST00000345795 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.47■□□□□ 0.07
CASC4-202ENST00000345795 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.47■□□□□ 0.073e-6■■□□□ 12.1
CASC4-202ENST00000345795 V9GYY5 206 aaPredicted RBP15.47■□□□□ 0.07
CASC4-202ENST00000345795 USP32Q8NFA0 1604 aa15.47■□□□□ 0.07
CASC4-202ENST00000345795 CLIC6Q96NY7 704 aa15.47■□□□□ 0.07
CASC4-202ENST00000345795 PDIA3P30101 505 aaKnown RBP15.46■□□□□ 0.07
CASC4-202ENST00000345795 LCORLQ8N3X6 602 aa15.46■□□□□ 0.07
CASC4-202ENST00000345795 MARCH10Q8NA82 808 aaPredicted RBP15.46■□□□□ 0.07
CASC4-202ENST00000345795 CELF1Q92879 486 aaKnown RBP15.46■□□□□ 0.07
CASC4-202ENST00000345795 CLSTN1O94985 981 aa15.46■□□□□ 0.06
CASC4-202ENST00000345795 HMGN5P82970 282 aaKnown RBP15.46■□□□□ 0.06
CASC4-202ENST00000345795 LRMPQ12912 555 aa15.46■□□□□ 0.06
CASC4-202ENST00000345795 ITPK1Q13572 414 aa15.46■□□□□ 0.06
CASC4-202ENST00000345795 ZNF609O15014 1411 aa15.45■□□□□ 0.06
CASC4-202ENST00000345795 ZMYM1Q5SVZ6 1142 aa15.45■□□□□ 0.06
CASC4-202ENST00000345795 CLIP2Q9UDT6 1046 aa15.45■□□□□ 0.06
CASC4-202ENST00000345795 C3P01024 1663 aa15.45■□□□□ 0.06
CASC4-202ENST00000345795 DLG5Q8TDM6 1919 aa15.45■□□□□ 0.06
CASC4-202ENST00000345795 MAGEB6P1A0A0J9YX57 407 aa15.45■□□□□ 0.06
CASC4-202ENST00000345795 STX17P56962 302 aa15.45■□□□□ 0.06
CASC4-202ENST00000345795 SSRP1Q08945 709 aaKnown RBP15.45■□□□□ 0.06
CASC4-202ENST00000345795 LPIN2Q92539 896 aa15.45■□□□□ 0.06
CASC4-202ENST00000345795 HELLSQ9NRZ9 838 aa15.45■□□□□ 0.06
CASC4-202ENST00000345795 CLIC4Q9Y696 253 aa15.45■□□□□ 0.06
CASC4-202ENST00000345795 UTRNP46939 3433 aa15.45■□□□□ 0.06
CASC4-202ENST00000345795 MAPK8IP1Q9UQF2 711 aa15.45■□□□□ 0.06
CASC4-202ENST00000345795 USP17L12C9JPN9 530 aa15.44■□□□□ 0.06
CASC4-202ENST00000345795 USP17L21D6R901 530 aa15.44■□□□□ 0.06
CASC4-202ENST00000345795 DIXDC1Q155Q3 683 aa15.44■□□□□ 0.06
CASC4-202ENST00000345795 ZNF827Q17R98 1081 aa15.44■□□□□ 0.06
CASC4-202ENST00000345795 CFAP100Q494V2 611 aa15.44■□□□□ 0.06
CASC4-202ENST00000345795 AMOTL1Q8IY63 956 aa15.44■□□□□ 0.06
CASC4-202ENST00000345795 CPVLQ9H3G5 476 aa15.44■□□□□ 0.06
CASC4-202ENST00000345795 NRBP1Q9UHY1 535 aa15.44■□□□□ 0.06
CASC4-202ENST00000345795 TTF1Q15361 905 aaPredicted RBP15.44■□□□□ 0.06
CASC4-202ENST00000345795 VPS54Q9P1Q0 977 aa15.44■□□□□ 0.06
CASC4-202ENST00000345795 ARHGAP23Q9P227 1491 aa15.44■□□□□ 0.06
CASC4-202ENST00000345795 TRIM37O94972 964 aa15.44■□□□□ 0.06
CASC4-202ENST00000345795 DDIT3P35638 169 aa15.44■□□□□ 0.06
CASC4-202ENST00000345795 FAM196AQ6ZSG2 479 aa15.44■□□□□ 0.06
CASC4-202ENST00000345795 TBC1D10CQ8IV04 446 aa15.44■□□□□ 0.06
CASC4-202ENST00000345795 CABP5Q9NP86 173 aa15.44■□□□□ 0.06
CASC4-202ENST00000345795 MST1RQ04912 1400 aa15.43■□□□□ 0.06
CASC4-202ENST00000345795 RTN1Q16799 776 aa15.43■□□□□ 0.06
CASC4-202ENST00000345795 KIF13AQ9H1H9 1805 aa15.43■□□□□ 0.06
CASC4-202ENST00000345795 KLRK1P26718 216 aa15.43■□□□□ 0.06
CASC4-202ENST00000345795 TPM4P67936 248 aa15.43■□□□□ 0.06
CASC4-202ENST00000345795 NSUN7Q8NE18 718 aaKnown RBP15.43■□□□□ 0.06
CASC4-202ENST00000345795 V9GY48 417 aaPredicted RBP15.43■□□□□ 0.06
CASC4-202ENST00000345795 NMT2O60551 498 aa15.43■□□□□ 0.06
CASC4-202ENST00000345795 SSBP05455 408 aaKnown RBP eCLIP15.43■□□□□ 0.06
CASC4-202ENST00000345795 ZFYP08048 801 aaPredicted RBP15.43■□□□□ 0.06
CASC4-202ENST00000345795 SLC3A2P08195 630 aaKnown RBP15.43■□□□□ 0.06
CASC4-202ENST00000345795 UQCRFS1P1P0C7P4 283 aa15.43■□□□□ 0.06
CASC4-202ENST00000345795 IQCA1Q86XH1 822 aa15.43■□□□□ 0.06
CASC4-202ENST00000345795 MAPKAPK5Q8IW41 473 aa15.43■□□□□ 0.06
CASC4-202ENST00000345795 CNNM3Q8NE01 707 aa15.43■□□□□ 0.06
CASC4-202ENST00000345795 SPTLC2O15270 562 aa15.42■□□□□ 0.06
CASC4-202ENST00000345795 GOLGA8HP0CJ92 632 aa15.42■□□□□ 0.06
CASC4-202ENST00000345795 IFIT1BQ5T764 474 aaKnown RBP15.42■□□□□ 0.06
CASC4-202ENST00000345795 TPTE2Q6XPS3 522 aa15.42■□□□□ 0.06
CASC4-202ENST00000345795 IFNL3Q8IZI9 196 aa15.42■□□□□ 0.06
CASC4-202ENST00000345795 PCMTD1Q96MG8 357 aaPredicted RBP15.42■□□□□ 0.06
CASC4-202ENST00000345795 ANGEL1Q9UNK9 670 aaKnown RBP15.42■□□□□ 0.06
CASC4-202ENST00000345795 BTBD18B2RXH4 712 aa15.42■□□□□ 0.06
CASC4-202ENST00000345795 ZNF445P59923 1031 aa15.42■□□□□ 0.06
CASC4-202ENST00000345795 ST3GAL1Q11201 340 aa15.42■□□□□ 0.06
CASC4-202ENST00000345795 UBN2Q6ZU65 1347 aa15.42■□□□□ 0.06
CASC4-202ENST00000345795 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.41■□□□□ 0.06
CASC4-202ENST00000345795 CEP57L1Q8IYX8 460 aa15.41■□□□□ 0.06
CASC4-202ENST00000345795 ZHX3Q9H4I2 956 aa15.41■□□□□ 0.06
CASC4-202ENST00000345795 NRDCO43847 1150 aa15.41■□□□□ 0.06
CASC4-202ENST00000345795 PRDX5P30044 214 aa15.41■□□□□ 0.06
CASC4-202ENST00000345795 CDC25AP30304 524 aa15.41■□□□□ 0.06
CASC4-202ENST00000345795 NLRP5P59047 1200 aa15.41■□□□□ 0.06
CASC4-202ENST00000345795 MRVI1Q9Y6F6 885 aa15.41■□□□□ 0.06
CASC4-202ENST00000345795 NR5A1Q13285 461 aa15.41■□□□□ 0.06
CASC4-202ENST00000345795 TBC1D9BQ66K14 1250 aa15.41■□□□□ 0.06
CASC4-202ENST00000345795 VSIG10Q8N0Z9 540 aa15.41■□□□□ 0.06
CASC4-202ENST00000345795 TM6SF1Q9BZW5 370 aa15.41■□□□□ 0.06
CASC4-202ENST00000345795 PIK3C2AO00443 1686 aa15.41■□□□□ 0.06
CASC4-202ENST00000345795 ZNF174Q15697 407 aa15.4■□□□□ 0.06
CASC4-202ENST00000345795 C3orf67Q6ZVT6 689 aa15.4■□□□□ 0.06
CASC4-202ENST00000345795 CYB5R4Q7L1T6 521 aa15.4■□□□□ 0.06
CASC4-202ENST00000345795 ISCA1Q9BUE6 129 aa15.4■□□□□ 0.06
CASC4-202ENST00000345795 CBX8Q9HC52 389 aa15.4■□□□□ 0.06
CASC4-202ENST00000345795 ZSWIM5Q9P217 1185 aa15.4■□□□□ 0.06
CASC4-202ENST00000345795 SLIT1O75093 1534 aa15.4■□□□□ 0.06
CASC4-202ENST00000345795 CYP2D6P10635 497 aa15.4■□□□□ 0.06
CASC4-202ENST00000345795 NOC3LQ8WTT2 800 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms