RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 BRIP1Q9BX63 1249 aa16.14■□□□□ 0.17
CDC42-202ENST00000344548 POLLQ9UGP5 575 aa16.14■□□□□ 0.17
CDC42-202ENST00000344548 SRGNP10124 158 aa16.13■□□□□ 0.17
CDC42-202ENST00000344548 DYNLL1P63167 89 aaKnown RBP16.13■□□□□ 0.17
CDC42-202ENST00000344548 NUCB2P80303 420 aa16.13■□□□□ 0.17
CDC42-202ENST00000344548 IMMTQ16891 758 aaKnown RBP16.13■□□□□ 0.17
CDC42-202ENST00000344548 IFNL3Q8IZI9 196 aa16.13■□□□□ 0.17
CDC42-202ENST00000344548 LEMD3Q9Y2U8 911 aa16.13■□□□□ 0.17
CDC42-202ENST00000344548 IL27Q8NEV9 243 aa16.12■□□□□ 0.17
CDC42-202ENST00000344548 FLAD1Q8NFF5 587 aa16.12■□□□□ 0.17
CDC42-202ENST00000344548 CRAMP1Q96RY5 1269 aa16.12■□□□□ 0.17
CDC42-202ENST00000344548 CTNNA3Q9UI47 895 aa16.12■□□□□ 0.17
CDC42-202ENST00000344548 PATL2C9JE40 543 aaKnown RBP16.12■□□□□ 0.17
CDC42-202ENST00000344548 ZNF213O14771 459 aa16.12■□□□□ 0.17
CDC42-202ENST00000344548 BAG4O95429 457 aaKnown RBP16.12■□□□□ 0.17
CDC42-202ENST00000344548 ANTXR2P58335 489 aa16.12■□□□□ 0.17
CDC42-202ENST00000344548 SDR42E1Q8WUS8 393 aa16.12■□□□□ 0.17
CDC42-202ENST00000344548 RGPD3A6NKT7 1758 aaPredicted RBP16.11■□□□□ 0.17
CDC42-202ENST00000344548 RGPD4Q7Z3J3 1758 aa16.11■□□□□ 0.17
CDC42-202ENST00000344548 BBOX1O75936 387 aa16.11■□□□□ 0.17
CDC42-202ENST00000344548 UFL1O94874 794 aa16.11■□□□□ 0.17
CDC42-202ENST00000344548 BRD1O95696 1058 aa16.11■□□□□ 0.17
CDC42-202ENST00000344548 MECOMQ03112 1051 aa16.11■□□□□ 0.17
CDC42-202ENST00000344548 NSUN4Q96CB9 384 aaKnown RBP16.11■□□□□ 0.17
CDC42-202ENST00000344548 ZSCAN31Q96LW9 406 aaPredicted RBP16.11■□□□□ 0.17
CDC42-202ENST00000344548 RIOK1Q9BRS2 568 aaKnown RBP16.11■□□□□ 0.17
CDC42-202ENST00000344548 APOBRQ0VD83 1088 aa16.11■□□□□ 0.17
CDC42-202ENST00000344548 MB21D2Q8IYB1 491 aaPredicted RBP16.11■□□□□ 0.17
CDC42-202ENST00000344548 TDRD7Q8NHU6 1098 aaKnown RBP16.11■□□□□ 0.17
CDC42-202ENST00000344548 SH2B1Q9NRF2 756 aaPredicted RBP16.11■□□□□ 0.17
CDC42-202ENST00000344548 PARP3Q9Y6F1 533 aa16.11■□□□□ 0.17
CDC42-202ENST00000344548 SLC4A4Q9Y6R1 1079 aa16.11■□□□□ 0.17
CDC42-202ENST00000344548 MYH13Q9UKX3 1938 aa16.11■□□□□ 0.17
CDC42-202ENST00000344548 SEMA3EO15041 775 aa16.1■□□□□ 0.17
CDC42-202ENST00000344548 COL11A2P13942 1736 aaPredicted RBP16.1■□□□□ 0.17
CDC42-202ENST00000344548 GJB2P29033 226 aa16.1■□□□□ 0.17
CDC42-202ENST00000344548 CTDSPL2Q05D32 466 aa16.1■□□□□ 0.17
CDC42-202ENST00000344548 CLEC17AQ6ZS10 378 aa16.1■□□□□ 0.17
CDC42-202ENST00000344548 TBC1D16Q8TBP0 767 aa16.1■□□□□ 0.17
CDC42-202ENST00000344548 AGXT2Q9BYV1 514 aa16.1■□□□□ 0.17
CDC42-202ENST00000344548 EVX2Q03828 476 aa16.1■□□□□ 0.17
CDC42-202ENST00000344548 ANKRD1Q15327 319 aa16.1■□□□□ 0.17
CDC42-202ENST00000344548 STK11IPQ8N1F8 1099 aa16.1■□□□□ 0.17
CDC42-202ENST00000344548 PPEF1O14829 653 aaPredicted RBP16.09■□□□□ 0.17
CDC42-202ENST00000344548 SYT1P21579 422 aa16.09■□□□□ 0.17
CDC42-202ENST00000344548 FOXD4L6Q3SYB3 417 aaPredicted RBP16.09■□□□□ 0.17
CDC42-202ENST00000344548 FOXD4L3Q6VB84 417 aaPredicted RBP16.09■□□□□ 0.17
CDC42-202ENST00000344548 SMC3Q9UQE7 1217 aa16.09■□□□□ 0.17
CDC42-202ENST00000344548 NEDD4P46934 1319 aa16.09■□□□□ 0.17
CDC42-202ENST00000344548 LTBP1Q14766 1721 aa16.08■□□□□ 0.17
CDC42-202ENST00000344548 JAK2O60674 1132 aa16.08■□□□□ 0.17
CDC42-202ENST00000344548 PPFIA3O75145 1194 aa16.08■□□□□ 0.17
CDC42-202ENST00000344548 HMGB1P09429 215 aaKnown RBP16.08■□□□□ 0.17
CDC42-202ENST00000344548 HMGB2P26583 209 aaKnown RBP16.08■□□□□ 0.17
CDC42-202ENST00000344548 SCRN1Q12765 414 aa16.08■□□□□ 0.17
CDC42-202ENST00000344548 ALX1Q15699 326 aa16.08■□□□□ 0.17
CDC42-202ENST00000344548 NAA16Q6N069 864 aaPredicted RBP16.08■□□□□ 0.17
CDC42-202ENST00000344548 CYB5R4Q7L1T6 521 aa16.08■□□□□ 0.17
CDC42-202ENST00000344548 PODXL2Q9NZ53 605 aa16.08■□□□□ 0.17
CDC42-202ENST00000344548 GGA1Q9UJY5 639 aa16.08■□□□□ 0.17
CDC42-202ENST00000344548 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.08■□□□□ 0.17
CDC42-202ENST00000344548 MAGEB6P1A0A0J9YX57 407 aa16.08■□□□□ 0.16
CDC42-202ENST00000344548 C15orf52Q6ZUT6 534 aaKnown RBP16.08■□□□□ 0.16
CDC42-202ENST00000344548 NAPBQ9H115 298 aa16.08■□□□□ 0.16
CDC42-202ENST00000344548 CD209Q9NNX6 404 aa16.08■□□□□ 0.16
CDC42-202ENST00000344548 PDS5AQ29RF7 1337 aaKnown RBP16.08■□□□□ 0.16
CDC42-202ENST00000344548 PRC1O43663 620 aa16.07■□□□□ 0.16
CDC42-202ENST00000344548 FGD1P98174 961 aa16.07■□□□□ 0.16
CDC42-202ENST00000344548 GTF3C6Q969F1 213 aa16.07■□□□□ 0.16
CDC42-202ENST00000344548 SENP2Q9HC62 589 aa16.07■□□□□ 0.16
CDC42-202ENST00000344548 NCOA5Q9HCD5 579 aaKnown RBP16.07■□□□□ 0.16
CDC42-202ENST00000344548 BRPF3Q9ULD4 1205 aa16.07■□□□□ 0.16
CDC42-202ENST00000344548 LRRC37AA6NMS7 1700 aa16.07■□□□□ 0.16
CDC42-202ENST00000344548 CYP2D7A0A087X1C5 515 aa16.07■□□□□ 0.16
CDC42-202ENST00000344548 B4E1Z4 1266 aa16.07■□□□□ 0.16
CDC42-202ENST00000344548 C6orf229H3BNL8 230 aa16.07■□□□□ 0.16
CDC42-202ENST00000344548 ATP2B4P23634 1241 aa16.07■□□□□ 0.16
CDC42-202ENST00000344548 CHRNA5P30532 468 aa16.07■□□□□ 0.16
CDC42-202ENST00000344548 MCTP1Q6DN14 999 aa16.07■□□□□ 0.16
CDC42-202ENST00000344548 RAB11FIP4Q86YS3 637 aa16.07■□□□□ 0.16
CDC42-202ENST00000344548 SP8Q8IXZ3 490 aa16.07■□□□□ 0.16
CDC42-202ENST00000344548 GBP4Q96PP9 640 aa16.07■□□□□ 0.16
CDC42-202ENST00000344548 STK32BQ9NY57 414 aa16.07■□□□□ 0.16
CDC42-202ENST00000344548 AATFQ9NY61 560 aaKnown RBP eCLIP16.07■□□□□ 0.162e-6■■■□□ 17.9
CDC42-202ENST00000344548 ATP6V0A2Q9Y487 856 aa16.07■□□□□ 0.16
CDC42-202ENST00000344548 RIMBP2O15034 1052 aa16.06■□□□□ 0.16
CDC42-202ENST00000344548 CTDNEP1O95476 244 aa16.06■□□□□ 0.16
CDC42-202ENST00000344548 NPR1P16066 1061 aa16.06■□□□□ 0.16
CDC42-202ENST00000344548 CCT2P78371 535 aaKnown RBP16.06■□□□□ 0.16
CDC42-202ENST00000344548 NCOA7Q8NI08 942 aa16.06■□□□□ 0.16
CDC42-202ENST00000344548 DUOX1Q9NRD9 1551 aa16.06■□□□□ 0.16
CDC42-202ENST00000344548 TRAK2O60296 914 aa16.06■□□□□ 0.16
CDC42-202ENST00000344548 DIXDC1Q155Q3 683 aa16.06■□□□□ 0.16
CDC42-202ENST00000344548 CHD4Q14839 1912 aa16.05■□□□□ 0.16
CDC42-202ENST00000344548 PDIA3P30101 505 aaKnown RBP16.05■□□□□ 0.16
CDC42-202ENST00000344548 PDE6BP35913 854 aa16.05■□□□□ 0.16
CDC42-202ENST00000344548 TDO2P48775 406 aa16.05■□□□□ 0.16
CDC42-202ENST00000344548 ZNF804AQ7Z570 1209 aa16.05■□□□□ 0.16
CDC42-202ENST00000344548 ZNF622Q969S3 477 aaKnown RBP eCLIP16.05■□□□□ 0.16
CDC42-202ENST00000344548 BAZ2AQ9UIF9 1905 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms