RNA–Protein interactions for RNA: ENST00000340621.9

CCDC144A-202, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2 BASIC

Gene CCDC144A, Length 2,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-202ENST00000340621 CARMIL3Q8ND23 1372 aa18.67■□□□□ 0.58
CCDC144A-202ENST00000340621 COL4A1P02462 1669 aa18.66■□□□□ 0.58
CCDC144A-202ENST00000340621 CEBPZQ03701 1054 aaKnown RBP18.66■□□□□ 0.58
CCDC144A-202ENST00000340621 IFNL3Q8IZI9 196 aa18.66■□□□□ 0.58
CCDC144A-202ENST00000340621 EPB41L4AQ9HCS5 686 aaPredicted RBP18.66■□□□□ 0.58
CCDC144A-202ENST00000340621 USP21Q9UK80 565 aa18.66■□□□□ 0.58
CCDC144A-202ENST00000340621 GTF2E1P29083 439 aaPredicted RBP18.66■□□□□ 0.58
CCDC144A-202ENST00000340621 CAMK4Q16566 473 aa18.66■□□□□ 0.58
CCDC144A-202ENST00000340621 BSDC1Q9NW68 430 aaPredicted RBP18.66■□□□□ 0.58
CCDC144A-202ENST00000340621 DACT1Q9NYF0 836 aa18.66■□□□□ 0.58
CCDC144A-202ENST00000340621 SRP68Q9UHB9 627 aaKnown RBP18.66■□□□□ 0.58
CCDC144A-202ENST00000340621 B4E1Z4 1266 aa18.65■□□□□ 0.58
CCDC144A-202ENST00000340621 PRKAB2O43741 272 aa18.65■□□□□ 0.58
CCDC144A-202ENST00000340621 DHX16O60231 1041 aaKnown RBP18.65■□□□□ 0.58
CCDC144A-202ENST00000340621 FTOQ9C0B1 505 aaKnown RBP eCLIP18.65■□□□□ 0.58
CCDC144A-202ENST00000340621 MYH7P12883 1935 aa18.65■□□□□ 0.58
CCDC144A-202ENST00000340621 GSG1L2A8MUP6 293 aa18.65■□□□□ 0.58
CCDC144A-202ENST00000340621 RPS6KA4O75676 772 aa18.65■□□□□ 0.58
CCDC144A-202ENST00000340621 GYG1P46976 350 aa18.65■□□□□ 0.58
CCDC144A-202ENST00000340621 SLC10A5Q5PT55 438 aa18.65■□□□□ 0.58
CCDC144A-202ENST00000340621 RC3H1Q5TC82 1133 aaKnown RBP18.65■□□□□ 0.58
CCDC144A-202ENST00000340621 KLHL34Q8N239 644 aa18.65■□□□□ 0.58
CCDC144A-202ENST00000340621 LRP2BPQ9P2M1 347 aa18.65■□□□□ 0.58
CCDC144A-202ENST00000340621 NARFQ9UHQ1 456 aa18.65■□□□□ 0.58
CCDC144A-202ENST00000340621 ANGEL1Q9UNK9 670 aaKnown RBP18.65■□□□□ 0.58
CCDC144A-202ENST00000340621 MYO5AQ9Y4I1 1855 aaKnown RBP18.65■□□□□ 0.58
CCDC144A-202ENST00000340621 COL5A3P25940 1745 aaPredicted RBP18.64■□□□□ 0.58
CCDC144A-202ENST00000340621 NEDD4P46934 1319 aa18.64■□□□□ 0.58
CCDC144A-202ENST00000340621 UVSSAQ2YD98 709 aa18.64■□□□□ 0.57
CCDC144A-202ENST00000340621 ILDR1Q86SU0 546 aaPredicted RBP18.64■□□□□ 0.57
CCDC144A-202ENST00000340621 NAPBQ9H115 298 aa18.64■□□□□ 0.57
CCDC144A-202ENST00000340621 MINPP1Q9UNW1 487 aa18.64■□□□□ 0.57
CCDC144A-202ENST00000340621 ARAP2Q8WZ64 1704 aa18.64■□□□□ 0.57
CCDC144A-202ENST00000340621 CTDSPL2Q05D32 466 aa18.64■□□□□ 0.57
CCDC144A-202ENST00000340621 HS1BP3Q53T59 392 aa18.64■□□□□ 0.57
CCDC144A-202ENST00000340621 OTUD7BQ6GQQ9 843 aa18.64■□□□□ 0.57
CCDC144A-202ENST00000340621 LCORLQ8N3X6 602 aa18.64■□□□□ 0.57
CCDC144A-202ENST00000340621 CELF1Q92879 486 aaKnown RBP18.64■□□□□ 0.57
CCDC144A-202ENST00000340621 NUP62CLQ9H1M0 184 aa18.64■□□□□ 0.57
CCDC144A-202ENST00000340621 SENP2Q9HC62 589 aa18.64■□□□□ 0.57
CCDC144A-202ENST00000340621 RCOR1Q9UKL0 485 aa18.64■□□□□ 0.57
CCDC144A-202ENST00000340621 TACC3Q9Y6A5 838 aa18.64■□□□□ 0.57
CCDC144A-202ENST00000340621 SH2B2O14492 632 aaPredicted RBP18.63■□□□□ 0.57
CCDC144A-202ENST00000340621 CPLX1O14810 134 aa18.63■□□□□ 0.57
CCDC144A-202ENST00000340621 GNPATO15228 680 aa18.63■□□□□ 0.57
CCDC144A-202ENST00000340621 ZSCAN30Q86W11 494 aa18.63■□□□□ 0.57
CCDC144A-202ENST00000340621 MIGA1Q8NAN2 632 aa18.63■□□□□ 0.57
CCDC144A-202ENST00000340621 IGDCC4Q8TDY8 1250 aa18.63■□□□□ 0.57
CCDC144A-202ENST00000340621 ORC3Q9UBD5 711 aaPredicted RBP18.63■□□□□ 0.57
CCDC144A-202ENST00000340621 RGL2O15211 777 aa18.62■□□□□ 0.57
CCDC144A-202ENST00000340621 NR1I2O75469 434 aa18.62■□□□□ 0.57
CCDC144A-202ENST00000340621 UBE4AQ14139 1066 aa18.62■□□□□ 0.57
CCDC144A-202ENST00000340621 AMIGO3Q86WK7 504 aa18.62■□□□□ 0.57
CCDC144A-202ENST00000340621 BICD2Q8TD16 824 aa18.62■□□□□ 0.57
CCDC144A-202ENST00000340621 USP28Q96RU2 1077 aa18.62■□□□□ 0.57
CCDC144A-202ENST00000340621 SETDB2Q96T68 719 aa18.62■□□□□ 0.57
CCDC144A-202ENST00000340621 SLC4A4Q9Y6R1 1079 aa18.62■□□□□ 0.57
CCDC144A-202ENST00000340621 ZNF804BA4D1E1 1349 aa18.62■□□□□ 0.57
CCDC144A-202ENST00000340621 ZMYM6O95789 1325 aa18.62■□□□□ 0.57
CCDC144A-202ENST00000340621 MAP3K11Q16584 847 aa18.62■□□□□ 0.57
CCDC144A-202ENST00000340621 ZSWIM5Q9P217 1185 aa18.62■□□□□ 0.57
CCDC144A-202ENST00000340621 CCNL1Q9UK58 526 aaPredicted RBP18.62■□□□□ 0.57
CCDC144A-202ENST00000340621 ZPR1O75312 459 aa18.61■□□□□ 0.57
CCDC144A-202ENST00000340621 ADGRA1Q86SQ6 560 aa18.61■□□□□ 0.57
CCDC144A-202ENST00000340621 CCDC24Q8N4L8 307 aa18.61■□□□□ 0.57
CCDC144A-202ENST00000340621 TNMDQ9H2S6 317 aa18.61■□□□□ 0.57
CCDC144A-202ENST00000340621 GJB4Q9NTQ9 266 aa18.61■□□□□ 0.57
CCDC144A-202ENST00000340621 ABCF2Q9UG63 623 aa18.61■□□□□ 0.57
CCDC144A-202ENST00000340621 PNPLA7Q6ZV29 1317 aa18.61■□□□□ 0.57
CCDC144A-202ENST00000340621 CCDC192P0DO97 292 aa18.61■□□□□ 0.57
CCDC144A-202ENST00000340621 RXRAP19793 462 aa18.61■□□□□ 0.57
CCDC144A-202ENST00000340621 NBPF5PQ86XG9 351 aaPredicted RBP18.61■□□□□ 0.57
CCDC144A-202ENST00000340621 FBXO18Q8NFZ0 1043 aa18.61■□□□□ 0.57
CCDC144A-202ENST00000340621 C8orf76Q96K31 380 aa18.61■□□□□ 0.57
CCDC144A-202ENST00000340621 TMEM87BQ96K49 555 aa18.61■□□□□ 0.57
CCDC144A-202ENST00000340621 DDX19AQ9NUU7 478 aaKnown RBP18.61■□□□□ 0.57
CCDC144A-202ENST00000340621 GNL3LQ9NVN8 582 aaKnown RBP18.61■□□□□ 0.57
CCDC144A-202ENST00000340621 ZNF831Q5JPB2 1677 aa18.6■□□□□ 0.57
CCDC144A-202ENST00000340621 GNAT2P19087 354 aa18.6■□□□□ 0.57
CCDC144A-202ENST00000340621 CYP7A1P22680 504 aa18.6■□□□□ 0.57
CCDC144A-202ENST00000340621 ATL3Q6DD88 541 aa18.6■□□□□ 0.57
CCDC144A-202ENST00000340621 APOA5Q6Q788 366 aa18.6■□□□□ 0.57
CCDC144A-202ENST00000340621 CKAP2LQ8IYA6 745 aa18.6■□□□□ 0.57
CCDC144A-202ENST00000340621 FAM84BQ96KN1 310 aaPredicted RBP18.6■□□□□ 0.57
CCDC144A-202ENST00000340621 ZNF396Q96N95 335 aaPredicted RBP18.6■□□□□ 0.57
CCDC144A-202ENST00000340621 NYXQ9GZU5 481 aa18.6■□□□□ 0.57
CCDC144A-202ENST00000340621 USP25Q9UHP3 1055 aa18.6■□□□□ 0.57
CCDC144A-202ENST00000340621 BCORQ6W2J9 1755 aa18.6■□□□□ 0.57
CCDC144A-202ENST00000340621 KDM4AO75164 1064 aa18.59■□□□□ 0.57
CCDC144A-202ENST00000340621 METAP2P50579 478 aaKnown RBP eCLIP18.59■□□□□ 0.57
CCDC144A-202ENST00000340621 CAVIN4Q5BKX8 364 aa18.59■□□□□ 0.57
CCDC144A-202ENST00000340621 AKNAD1Q5T1N1 836 aa18.59■□□□□ 0.57
CCDC144A-202ENST00000340621 ARHGEF1Q92888 912 aaKnown RBP18.59■□□□□ 0.57
CCDC144A-202ENST00000340621 NLRP3Q96P20 1036 aa18.59■□□□□ 0.57
CCDC144A-202ENST00000340621 NACAP1Q9BZK3 213 aa18.59■□□□□ 0.57
CCDC144A-202ENST00000340621 CLSTN2Q9H4D0 955 aa18.59■□□□□ 0.57
CCDC144A-202ENST00000340621 LY9Q9HBG7 655 aa18.59■□□□□ 0.57
CCDC144A-202ENST00000340621 TDO2P48775 406 aa18.59■□□□□ 0.57
CCDC144A-202ENST00000340621 RPS8P62241 208 aaKnown RBP18.59■□□□□ 0.57
CCDC144A-202ENST00000340621 TMEM67Q5HYA8 995 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms