RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 GPR108Q9NPR9 543 aa10.99□□□□□ -0.65
SS18L1-201ENST00000331758 PARP3Q9Y6F1 533 aa10.99□□□□□ -0.65
SS18L1-201ENST00000331758 SMTNL1A8MU46 457 aa10.99□□□□□ -0.65
SS18L1-201ENST00000331758 KCNG4Q8TDN1 519 aa10.99□□□□□ -0.65
SS18L1-201ENST00000331758 MRPS27Q92552 414 aaKnown RBP10.99□□□□□ -0.65
SS18L1-201ENST00000331758 ITSN1Q15811 1721 aa10.99□□□□□ -0.65
SS18L1-201ENST00000331758 SPTLC2O15270 562 aa10.99□□□□□ -0.65
SS18L1-201ENST00000331758 SYKP43405 635 aa10.99□□□□□ -0.65
SS18L1-201ENST00000331758 SUSD4Q5VX71 490 aa10.99□□□□□ -0.65
SS18L1-201ENST00000331758 MAGEC2Q9UBF1 373 aaPredicted RBP10.98□□□□□ -0.65
SS18L1-201ENST00000331758 KCNQ2O43526 872 aa10.98□□□□□ -0.65
SS18L1-201ENST00000331758 HLA-DOAP06340 250 aa10.98□□□□□ -0.65
SS18L1-201ENST00000331758 STIM1Q13586 685 aa10.98□□□□□ -0.65
SS18L1-201ENST00000331758 NOC3LQ8WTT2 800 aaKnown RBP10.98□□□□□ -0.65
SS18L1-201ENST00000331758 PHKBQ93100 1093 aa10.98□□□□□ -0.65
SS18L1-201ENST00000331758 ANO6Q4KMQ2 910 aa10.98□□□□□ -0.65
SS18L1-201ENST00000331758 ZMYM1Q5SVZ6 1142 aa10.98□□□□□ -0.65
SS18L1-201ENST00000331758 FAM196AQ6ZSG2 479 aa10.98□□□□□ -0.65
SS18L1-201ENST00000331758 TMEM87BQ96K49 555 aa10.98□□□□□ -0.65
SS18L1-201ENST00000331758 FER1L4A9Z1Z3 1794 aa10.98□□□□□ -0.65
SS18L1-201ENST00000331758 DNAJC25Q9H1X3 360 aa10.98□□□□□ -0.65
SS18L1-201ENST00000331758 SAP30BPQ9UHR5 308 aaKnown RBP10.98□□□□□ -0.65
SS18L1-201ENST00000331758 PALLDQ8WX93 1383 aa10.97□□□□□ -0.65
SS18L1-201ENST00000331758 REREQ9P2R6 1566 aa10.97□□□□□ -0.65
SS18L1-201ENST00000331758 ERVV-1B6SEH8 477 aa10.97□□□□□ -0.65
SS18L1-201ENST00000331758 STX1AQ16623 288 aa10.97□□□□□ -0.65
SS18L1-201ENST00000331758 SDR42E1Q8WUS8 393 aa10.97□□□□□ -0.65
SS18L1-201ENST00000331758 QTRT2Q9H974 415 aaKnown RBP10.97□□□□□ -0.65
SS18L1-201ENST00000331758 SRP68Q9UHB9 627 aaKnown RBP10.97□□□□□ -0.65
SS18L1-201ENST00000331758 ATP10DQ9P241 1426 aa10.97□□□□□ -0.65
SS18L1-201ENST00000331758 MAST3O60307 1309 aa10.97□□□□□ -0.65
SS18L1-201ENST00000331758 ZNF76P36508 570 aa10.97□□□□□ -0.65
SS18L1-201ENST00000331758 OSBP2Q969R2 916 aa10.97□□□□□ -0.65
SS18L1-201ENST00000331758 RBM17Q96I25 401 aaKnown RBP10.97□□□□□ -0.65
SS18L1-201ENST00000331758 GGA1Q9UJY5 639 aa10.97□□□□□ -0.65
SS18L1-201ENST00000331758 ARHGAP23Q9P227 1491 aa10.97□□□□□ -0.65
SS18L1-201ENST00000331758 CYP19A1P11511 503 aaPredicted RBP10.97□□□□□ -0.65
SS18L1-201ENST00000331758 PDE4CQ08493 712 aa10.97□□□□□ -0.65
SS18L1-201ENST00000331758 ERFEQ4G0M1 354 aa10.97□□□□□ -0.65
SS18L1-201ENST00000331758 FAM177A1Q8N128 213 aaPredicted RBP10.97□□□□□ -0.65
SS18L1-201ENST00000331758 GTF3C6Q969F1 213 aa10.97□□□□□ -0.65
SS18L1-201ENST00000331758 EPS15P42566 896 aa10.96□□□□□ -0.65
SS18L1-201ENST00000331758 TEX11Q8IYF3 940 aa10.96□□□□□ -0.65
SS18L1-201ENST00000331758 LLPHQ9BRT6 129 aaKnown RBP10.96□□□□□ -0.65
SS18L1-201ENST00000331758 CLIP2Q9UDT6 1046 aa10.96□□□□□ -0.65
SS18L1-201ENST00000331758 SLIT1O75093 1534 aa10.96□□□□□ -0.65
SS18L1-201ENST00000331758 APBA3O96018 575 aa10.96□□□□□ -0.65
SS18L1-201ENST00000331758 HEATR3Q7Z4Q2 680 aa10.96□□□□□ -0.65
SS18L1-201ENST00000331758 PPFIBP1Q86W92 1011 aa10.96□□□□□ -0.65
SS18L1-201ENST00000331758 RGS12O14924 1447 aa10.96□□□□□ -0.66
SS18L1-201ENST00000331758 A0A1B0GVL5 298 aa10.96□□□□□ -0.66
SS18L1-201ENST00000331758 PATL2C9JE40 543 aaKnown RBP10.96□□□□□ -0.66
SS18L1-201ENST00000331758 IFNL3Q8IZI9 196 aa10.96□□□□□ -0.66
SS18L1-201ENST00000331758 ZMYND15Q9H091 742 aa10.96□□□□□ -0.66
SS18L1-201ENST00000331758 TMEM63CQ9P1W3 806 aa10.96□□□□□ -0.66
SS18L1-201ENST00000331758 CBFA2T2O43439 604 aa10.96□□□□□ -0.66
SS18L1-201ENST00000331758 TYRO3Q06418 890 aa10.96□□□□□ -0.66
SS18L1-201ENST00000331758 PDIA6Q15084 440 aa10.96□□□□□ -0.66
SS18L1-201ENST00000331758 FAM200AQ8TCP9 573 aa10.96□□□□□ -0.66
SS18L1-201ENST00000331758 ZNF830Q96NB3 372 aaPredicted RBP10.96□□□□□ -0.66
SS18L1-201ENST00000331758 RBSNQ9H1K0 784 aa10.96□□□□□ -0.66
SS18L1-201ENST00000331758 MTMR6Q9Y217 621 aa10.96□□□□□ -0.66
SS18L1-201ENST00000331758 THRAP3Q9Y2W1 955 aaKnown RBP10.96□□□□□ -0.66
SS18L1-201ENST00000331758 USP17L12C9JPN9 530 aa10.95□□□□□ -0.66
SS18L1-201ENST00000331758 USP17L21D6R901 530 aa10.95□□□□□ -0.66
SS18L1-201ENST00000331758 TRIM37O94972 964 aa10.95□□□□□ -0.66
SS18L1-201ENST00000331758 ADD1P35611 737 aaKnown RBP10.95□□□□□ -0.66
SS18L1-201ENST00000331758 UBA7P41226 1012 aa10.95□□□□□ -0.66
SS18L1-201ENST00000331758 NECTIN1Q15223 517 aa10.95□□□□□ -0.66
SS18L1-201ENST00000331758 HSP90AA4PQ58FG1 418 aa10.95□□□□□ -0.66
SS18L1-201ENST00000331758 AKNAD1Q5T1N1 836 aa10.95□□□□□ -0.66
SS18L1-201ENST00000331758 TRPC5Q9UL62 973 aaPredicted RBP10.95□□□□□ -0.66
SS18L1-201ENST00000331758 A0A0U1RQG5 324 aaPredicted RBP10.95□□□□□ -0.66
SS18L1-201ENST00000331758 hCG_1642624A0A1W2PR95 340 aa10.95□□□□□ -0.66
SS18L1-201ENST00000331758 OFD1O75665 1012 aa10.95□□□□□ -0.66
SS18L1-201ENST00000331758 LARGE1O95461 756 aa10.95□□□□□ -0.66
SS18L1-201ENST00000331758 MNS1Q8NEH6 495 aa10.95□□□□□ -0.66
SS18L1-201ENST00000331758 WDR66Q8TBY9 1149 aa10.95□□□□□ -0.66
SS18L1-201ENST00000331758 PUS7LQ9H0K6 701 aaKnown RBP10.95□□□□□ -0.66
SS18L1-201ENST00000331758 PRDM10Q9NQV6 1147 aa10.95□□□□□ -0.66
SS18L1-201ENST00000331758 BMP2KQ9NSY1 1161 aaPredicted RBP10.95□□□□□ -0.66
SS18L1-201ENST00000331758 SOS2Q07890 1332 aaPredicted RBP10.95□□□□□ -0.66
SS18L1-201ENST00000331758 TRIM75PA6NK02 468 aa10.95□□□□□ -0.66
SS18L1-201ENST00000331758 AFMP43652 599 aa10.95□□□□□ -0.66
SS18L1-201ENST00000331758 ISCA1Q9BUE6 129 aa10.95□□□□□ -0.66
SS18L1-201ENST00000331758 KIF20BQ96Q89 1820 aa10.94□□□□□ -0.66
SS18L1-201ENST00000331758 M0R2C6 588 aa10.94□□□□□ -0.66
SS18L1-201ENST00000331758 PLCG2P16885 1265 aa10.94□□□□□ -0.66
SS18L1-201ENST00000331758 NAP1L1P55209 391 aaKnown RBP10.94□□□□□ -0.66
SS18L1-201ENST00000331758 SMIM5Q71RC9 77 aa10.94□□□□□ -0.66
SS18L1-201ENST00000331758 BRAPQ7Z569 592 aa10.94□□□□□ -0.66
SS18L1-201ENST00000331758 LEO1Q8WVC0 666 aaPredicted RBP10.94□□□□□ -0.66
SS18L1-201ENST00000331758 SFPQP23246 707 aaKnown RBP eCLIP10.94□□□□□ -0.663e-7■■■□□ 16.6
SS18L1-201ENST00000331758 GNAQP50148 359 aa10.94□□□□□ -0.66
SS18L1-201ENST00000331758 CUL4AQ13619 759 aa10.94□□□□□ -0.66
SS18L1-201ENST00000331758 CCDC12Q8WUD4 166 aaPredicted RBP10.94□□□□□ -0.66
SS18L1-201ENST00000331758 V9GY48 417 aaPredicted RBP10.94□□□□□ -0.66
SS18L1-201ENST00000331758 RTL9Q8NET4 1388 aa10.94□□□□□ -0.66
SS18L1-201ENST00000331758 CALM1P0DP23 149 aa10.94□□□□□ -0.66
SS18L1-201ENST00000331758 CALM2P0DP24 149 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms