RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 UTP14AQ9BVJ6 771 aaKnown RBP26.09■■□□□ 1.77
PNKP-201ENST00000322344 GOLPH3LQ9H4A5 285 aa26.09■■□□□ 1.77
PNKP-201ENST00000322344 YEATS4O95619 227 aa26.09■■□□□ 1.77
PNKP-201ENST00000322344 APPP05067 770 aa26.09■■□□□ 1.77
PNKP-201ENST00000322344 STX1AQ16623 288 aa26.09■■□□□ 1.77
PNKP-201ENST00000322344 ADALQ6DHV7 355 aa26.09■■□□□ 1.77
PNKP-201ENST00000322344 INTS5Q6P9B9 1019 aaKnown RBP26.09■■□□□ 1.77
PNKP-201ENST00000322344 TBC1D10CQ8IV04 446 aa26.09■■□□□ 1.77
PNKP-201ENST00000322344 FSIP1Q8NA03 581 aa26.09■■□□□ 1.77
PNKP-201ENST00000322344 TMEM87BQ96K49 555 aa26.09■■□□□ 1.77
PNKP-201ENST00000322344 DNAJC25Q9H1X3 360 aa26.09■■□□□ 1.77
PNKP-201ENST00000322344 ROBO1Q9Y6N7 1651 aa26.08■■□□□ 1.77
PNKP-201ENST00000322344 CDKL5O76039 1030 aa26.08■■□□□ 1.77
PNKP-201ENST00000322344 SUSD4Q5VX71 490 aa26.08■■□□□ 1.77
PNKP-201ENST00000322344 SPATA5Q8NB90 893 aa26.08■■□□□ 1.77
PNKP-201ENST00000322344 KCNG4Q8TDN1 519 aa26.08■■□□□ 1.77
PNKP-201ENST00000322344 AIDAQ96BJ3 306 aa26.08■■□□□ 1.77
PNKP-201ENST00000322344 STRBPQ96SI9 672 aaKnown RBP26.08■■□□□ 1.77
PNKP-201ENST00000322344 POLR3EQ9NVU0 708 aa26.08■■□□□ 1.77
PNKP-201ENST00000322344 WWC3Q9ULE0 1092 aa26.08■■□□□ 1.77
PNKP-201ENST00000322344 RTL9Q8NET4 1388 aa26.07■■□□□ 1.76
PNKP-201ENST00000322344 SLIT2O94813 1529 aa26.07■■□□□ 1.76
PNKP-201ENST00000322344 SH2B2O14492 632 aaPredicted RBP26.07■■□□□ 1.76
PNKP-201ENST00000322344 MAP3K12Q12852 859 aa26.07■■□□□ 1.76
PNKP-201ENST00000322344 MRPS27Q92552 414 aaKnown RBP26.07■■□□□ 1.76
PNKP-201ENST00000322344 MPHOSPH8Q99549 860 aa26.07■■□□□ 1.76
PNKP-201ENST00000322344 PPFIA3O75145 1194 aa26.07■■□□□ 1.76
PNKP-201ENST00000322344 RRP9O43818 475 aaKnown RBP26.06■■□□□ 1.76
PNKP-201ENST00000322344 CPLX2Q6PUV4 134 aaKnown RBP26.06■■□□□ 1.76
PNKP-201ENST00000322344 PLA2G4DQ86XP0 818 aa26.06■■□□□ 1.76
PNKP-201ENST00000322344 SPC24Q8NBT2 197 aa26.06■■□□□ 1.76
PNKP-201ENST00000322344 LINC00301Q8NCQ3 95 aa26.06■■□□□ 1.76
PNKP-201ENST00000322344 PCDHA7Q9UN72 937 aa26.06■■□□□ 1.76
PNKP-201ENST00000322344 ZNF75DP51815 510 aa26.05■■□□□ 1.76
PNKP-201ENST00000322344 STK38Q15208 465 aa26.05■■□□□ 1.76
PNKP-201ENST00000322344 DDB1Q16531 1140 aa26.05■■□□□ 1.76
PNKP-201ENST00000322344 CCDC152Q4G0S7 254 aa26.05■■□□□ 1.76
PNKP-201ENST00000322344 RREB1Q92766 1687 aa26.05■■□□□ 1.76
PNKP-201ENST00000322344 C4AP0C0L4 1744 aa26.05■■□□□ 1.76
PNKP-201ENST00000322344 C4BP0C0L5 1744 aa26.05■■□□□ 1.76
PNKP-201ENST00000322344 PATL2C9JE40 543 aaKnown RBP26.05■■□□□ 1.76
PNKP-201ENST00000322344 CRKLP46109 303 aaKnown RBP26.05■■□□□ 1.76
PNKP-201ENST00000322344 HELBQ8NG08 1087 aaPredicted RBP26.05■■□□□ 1.76
PNKP-201ENST00000322344 SPATA31A1Q5TZJ5 1347 aa26.05■■□□□ 1.76
PNKP-201ENST00000322344 CICQ96RK0 1608 aaPredicted RBP26.04■■□□□ 1.76
PNKP-201ENST00000322344 ATP6V1AP38606 617 aa26.04■■□□□ 1.76
PNKP-201ENST00000322344 METAP2P50579 478 aaKnown RBP eCLIP26.04■■□□□ 1.76
PNKP-201ENST00000322344 SF3A1Q15459 793 aaKnown RBP26.04■■□□□ 1.76
PNKP-201ENST00000322344 DNTTIP2Q5QJE6 756 aaKnown RBP26.04■■□□□ 1.76
PNKP-201ENST00000322344 MYSM1Q5VVJ2 828 aa26.04■■□□□ 1.76
PNKP-201ENST00000322344 CYB5R4Q7L1T6 521 aa26.04■■□□□ 1.76
PNKP-201ENST00000322344 KIAA1524Q8TCG1 905 aa26.04■■□□□ 1.76
PNKP-201ENST00000322344 TRIM5Q9C035 493 aa26.04■■□□□ 1.76
PNKP-201ENST00000322344 KCNF1Q9H3M0 494 aa26.04■■□□□ 1.76
PNKP-201ENST00000322344 ANO10Q9NW15 660 aa26.04■■□□□ 1.76
PNKP-201ENST00000322344 UQCRHLA0A096LP55 91 aa26.04■■□□□ 1.76
PNKP-201ENST00000322344 GOLGA6L19H0YKK7 550 aa26.04■■□□□ 1.76
PNKP-201ENST00000322344 UQCRHP07919 91 aa26.04■■□□□ 1.76
PNKP-201ENST00000322344 CAMTA2O94983 1202 aa26.03■■□□□ 1.76
PNKP-201ENST00000322344 CDC25BP30305 580 aa26.03■■□□□ 1.76
PNKP-201ENST00000322344 IQCB1Q15051 598 aa26.03■■□□□ 1.76
PNKP-201ENST00000322344 OTUD7BQ6GQQ9 843 aa26.03■■□□□ 1.76
PNKP-201ENST00000322344 SARM1Q6SZW1 724 aa26.03■■□□□ 1.76
PNKP-201ENST00000322344 SYNE3Q6ZMZ3 975 aa26.03■■□□□ 1.76
PNKP-201ENST00000322344 FMR1NBQ8N0W7 255 aaPredicted RBP26.03■■□□□ 1.76
PNKP-201ENST00000322344 IGHMBP2P38935 993 aaKnown RBP26.02■■□□□ 1.76
PNKP-201ENST00000322344 KIF23Q02241 960 aaPredicted RBP26.02■■□□□ 1.76
PNKP-201ENST00000322344 RASGRF1Q13972 1273 aa26.02■■□□□ 1.76
PNKP-201ENST00000322344 SGMS1Q86VZ5 419 aa26.02■■□□□ 1.76
PNKP-201ENST00000322344 DOCK2Q92608 1830 aa26.02■■□□□ 1.76
PNKP-201ENST00000322344 APOA5Q6Q788 366 aa26.02■■□□□ 1.76
PNKP-201ENST00000322344 PRIMPOLQ96LW4 560 aa26.02■■□□□ 1.76
PNKP-201ENST00000322344 NAPBQ9H115 298 aa26.02■■□□□ 1.76
PNKP-201ENST00000322344 CNNM2Q9H8M5 875 aa26.02■■□□□ 1.76
PNKP-201ENST00000322344 LOC102724428A0A0B4J2F2 783 aa26.01■■□□□ 1.75
PNKP-201ENST00000322344 B4E1Z4 1266 aa26.01■■□□□ 1.75
PNKP-201ENST00000322344 SPTLC2O15270 562 aa26.01■■□□□ 1.75
PNKP-201ENST00000322344 GNAT2P19087 354 aa26.01■■□□□ 1.75
PNKP-201ENST00000322344 SIK1P57059 783 aa26.01■■□□□ 1.75
PNKP-201ENST00000322344 IFNL3Q8IZI9 196 aa26.01■■□□□ 1.75
PNKP-201ENST00000322344 MAGEB6Q8N7X4 407 aa26.01■■□□□ 1.75
PNKP-201ENST00000322344 CLIC4Q9Y696 253 aa26.01■■□□□ 1.75
PNKP-201ENST00000322344 DYNC1I1O14576 645 aa26■■□□□ 1.75
PNKP-201ENST00000322344 POLR3DP05423 398 aaPredicted RBP26■■□□□ 1.75
PNKP-201ENST00000322344 RAB11FIP4Q86YS3 637 aa26■■□□□ 1.75
PNKP-201ENST00000322344 MBD4O95243 580 aa26■■□□□ 1.75
PNKP-201ENST00000322344 LIFRP42702 1097 aa26■■□□□ 1.75
PNKP-201ENST00000322344 DRC7Q8IY82 874 aa26■■□□□ 1.75
PNKP-201ENST00000322344 IGDCC4Q8TDY8 1250 aa26■■□□□ 1.75
PNKP-201ENST00000322344 NEDD4P46934 1319 aa25.99■■□□□ 1.75
PNKP-201ENST00000322344 NRAPQ86VF7 1730 aa25.99■■□□□ 1.75
PNKP-201ENST00000322344 ZBTB43O43298 467 aa25.99■■□□□ 1.75
PNKP-201ENST00000322344 NTSR2O95665 410 aa25.99■■□□□ 1.75
PNKP-201ENST00000322344 HSP90AA2PQ14568 343 aaPredicted RBP25.99■■□□□ 1.75
PNKP-201ENST00000322344 ANO1Q5XXA6 986 aa25.99■■□□□ 1.75
PNKP-201ENST00000322344 C11orf57Q6ZUT1 292 aaPredicted RBP25.99■■□□□ 1.75
PNKP-201ENST00000322344 ALG1Q9BT22 464 aa25.99■■□□□ 1.75
PNKP-201ENST00000322344 KRT23Q9C075 422 aa25.99■■□□□ 1.75
PNKP-201ENST00000322344 NAT10Q9H0A0 1025 aaKnown RBP25.99■■□□□ 1.75
PNKP-201ENST00000322344 SEC31BQ9NQW1 1179 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms