RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 CTAGE15A4D2H0 777 aa18.75■□□□□ 0.59
SFXN1-201ENST00000321442 CCDC175P0C221 793 aa18.75■□□□□ 0.59
SFXN1-201ENST00000321442 CTAGE8P0CG41 777 aa18.75■□□□□ 0.59
SFXN1-201ENST00000321442 ITGA6P23229 1130 aa18.75■□□□□ 0.59
SFXN1-201ENST00000321442 IQCEQ6IPM2 695 aa18.75■□□□□ 0.59
SFXN1-201ENST00000321442 CTAGE6Q86UF2 777 aa18.75■□□□□ 0.59
SFXN1-201ENST00000321442 CTAGE4Q8IX94 777 aa18.75■□□□□ 0.59
SFXN1-201ENST00000321442 IL15P40933 162 aaPredicted RBP18.74■□□□□ 0.59
SFXN1-201ENST00000321442 ZNF569Q5MCW4 686 aa18.74■□□□□ 0.59
SFXN1-201ENST00000321442 BEND3Q5T5X7 828 aa18.74■□□□□ 0.59
SFXN1-201ENST00000321442 IPO4Q8TEX9 1081 aaKnown RBP18.74■□□□□ 0.59
SFXN1-201ENST00000321442 NLRP3Q96P20 1036 aa18.74■□□□□ 0.59
SFXN1-201ENST00000321442 FAM107BQ9H098 131 aa18.74■□□□□ 0.59
SFXN1-201ENST00000321442 MRVI1Q9Y6F6 885 aa18.74■□□□□ 0.59
SFXN1-201ENST00000321442 CDC5LQ99459 802 aaKnown RBP18.74■□□□□ 0.59
SFXN1-201ENST00000321442 LSG1Q9H089 658 aaKnown RBP18.74■□□□□ 0.59
SFXN1-201ENST00000321442 PTPRMP28827 1452 aa18.74■□□□□ 0.59
SFXN1-201ENST00000321442 SHTN1A0MZ66 631 aa18.74■□□□□ 0.59
SFXN1-201ENST00000321442 USP5P45974 858 aa18.74■□□□□ 0.59
SFXN1-201ENST00000321442 NLRP5P59047 1200 aa18.74■□□□□ 0.59
SFXN1-201ENST00000321442 CTCFLQ8NI51 663 aaPredicted RBP18.74■□□□□ 0.59
SFXN1-201ENST00000321442 GOLGA1Q92805 767 aa18.74■□□□□ 0.59
SFXN1-201ENST00000321442 ZSWIM6Q9HCJ5 1215 aa18.74■□□□□ 0.59
SFXN1-201ENST00000321442 ZBTB1Q9Y2K1 713 aa18.74■□□□□ 0.59
SFXN1-201ENST00000321442 RTCBQ9Y3I0 505 aaKnown RBP18.74■□□□□ 0.59
SFXN1-201ENST00000321442 CCDC152Q4G0S7 254 aa18.73■□□□□ 0.59
SFXN1-201ENST00000321442 MFSD6Q6ZSS7 791 aa18.73■□□□□ 0.59
SFXN1-201ENST00000321442 ANKRD18AQ8IVF6 992 aa18.73■□□□□ 0.59
SFXN1-201ENST00000321442 BAG1Q99933 345 aaPredicted RBP18.73■□□□□ 0.59
SFXN1-201ENST00000321442 ADGRL3Q9HAR2 1447 aa18.73■□□□□ 0.59
SFXN1-201ENST00000321442 ZNF202O95125 648 aa18.73■□□□□ 0.59
SFXN1-201ENST00000321442 PPP2R3AQ06190 1150 aa18.73■□□□□ 0.59
SFXN1-201ENST00000321442 GABPB1Q06547 395 aaPredicted RBP18.73■□□□□ 0.59
SFXN1-201ENST00000321442 TAX1BP1Q86VP1 789 aa18.73■□□□□ 0.59
SFXN1-201ENST00000321442 IQCA1Q86XH1 822 aa18.73■□□□□ 0.59
SFXN1-201ENST00000321442 LUC7LQ9NQ29 371 aaKnown RBP18.73■□□□□ 0.59
SFXN1-201ENST00000321442 ADAMTS13Q76LX8 1427 aa18.72■□□□□ 0.59
SFXN1-201ENST00000321442 TDRD12Q587J7 1177 aaKnown RBP18.72■□□□□ 0.59
SFXN1-201ENST00000321442 SOGA3Q5TF21 947 aa18.72■□□□□ 0.59
SFXN1-201ENST00000321442 RRAGBQ5VZM2 374 aa18.72■□□□□ 0.59
SFXN1-201ENST00000321442 NEXMIFQ5QGS0 1516 aa18.72■□□□□ 0.59
SFXN1-201ENST00000321442 MTIF2P46199 727 aaKnown RBP18.72■□□□□ 0.59
SFXN1-201ENST00000321442 ZFYVE27Q5T4F4 411 aa18.72■□□□□ 0.59
SFXN1-201ENST00000321442 GPATCH11Q8N954 259 aa18.72■□□□□ 0.59
SFXN1-201ENST00000321442 QRICH2Q9H0J4 1663 aa18.72■□□□□ 0.59
SFXN1-201ENST00000321442 KIF24Q5T7B8 1368 aa18.72■□□□□ 0.59
SFXN1-201ENST00000321442 NAA30Q147X3 362 aaPredicted RBP18.72■□□□□ 0.59
SFXN1-201ENST00000321442 LRRC8AQ8IWT6 810 aa18.72■□□□□ 0.59
SFXN1-201ENST00000321442 RNF113AO15541 343 aaKnown RBP18.71■□□□□ 0.59
SFXN1-201ENST00000321442 CACNA2D4Q7Z3S7 1137 aa18.71■□□□□ 0.59
SFXN1-201ENST00000321442 FTOQ9C0B1 505 aaKnown RBP eCLIP18.71■□□□□ 0.59
SFXN1-201ENST00000321442 STAP2Q9UGK3 403 aa18.71■□□□□ 0.59
SFXN1-201ENST00000321442 GUCA1BQ9UMX6 200 aa18.71■□□□□ 0.59
SFXN1-201ENST00000321442 PAFAH1B1P43034 410 aa18.71■□□□□ 0.59
SFXN1-201ENST00000321442 TNNI3KQ59H18 835 aa18.71■□□□□ 0.59
SFXN1-201ENST00000321442 FPGT-TNNI3KV9GXZ4 949 aa18.71■□□□□ 0.59
SFXN1-201ENST00000321442 LRRC24Q50LG9 513 aa18.71■□□□□ 0.59
SFXN1-201ENST00000321442 KRBA2Q6ZNG9 492 aa18.71■□□□□ 0.59
SFXN1-201ENST00000321442 CAPZA3Q96KX2 299 aa18.71■□□□□ 0.59
SFXN1-201ENST00000321442 RNF187Q5TA31 235 aaPredicted RBP18.7■□□□□ 0.58
SFXN1-201ENST00000321442 SYNE4Q8N205 404 aa18.7■□□□□ 0.58
SFXN1-201ENST00000321442 PUS3Q9BZE2 481 aaKnown RBP18.7■□□□□ 0.58
SFXN1-201ENST00000321442 SPATA31A3Q5VYP0 1347 aa18.7■□□□□ 0.58
SFXN1-201ENST00000321442 ARHGEF40Q8TER5 1519 aa18.7■□□□□ 0.58
SFXN1-201ENST00000321442 RIMBP2O15034 1052 aa18.7■□□□□ 0.58
SFXN1-201ENST00000321442 ANO1Q5XXA6 986 aa18.7■□□□□ 0.58
SFXN1-201ENST00000321442 PTPRUQ92729 1446 aa18.7■□□□□ 0.58
SFXN1-201ENST00000321442 POTEB2H3BUK9 544 aa18.7■□□□□ 0.58
SFXN1-201ENST00000321442 IDEP14735 1019 aa18.7■□□□□ 0.58
SFXN1-201ENST00000321442 TRIM21P19474 475 aaKnown RBP18.7■□□□□ 0.58
SFXN1-201ENST00000321442 WTAPQ15007 396 aa18.7■□□□□ 0.58
SFXN1-201ENST00000321442 PTPN21Q16825 1174 aa18.7■□□□□ 0.58
SFXN1-201ENST00000321442 TLR7Q9NYK1 1049 aaKnown RBP18.7■□□□□ 0.58
SFXN1-201ENST00000321442 CPS1P31327 1500 aa18.7■□□□□ 0.58
SFXN1-201ENST00000321442 WDR17Q8IZU2 1322 aa18.7■□□□□ 0.58
SFXN1-201ENST00000321442 UBA7P41226 1012 aa18.7■□□□□ 0.58
SFXN1-201ENST00000321442 DMTNQ08495 405 aa18.7■□□□□ 0.58
SFXN1-201ENST00000321442 DNAJC21Q5F1R6 531 aaKnown RBP18.7■□□□□ 0.58
SFXN1-201ENST00000321442 ZKSCAN3Q9BRR0 538 aa18.7■□□□□ 0.58
SFXN1-201ENST00000321442 PIK3C2BO00750 1634 aa18.69■□□□□ 0.58
SFXN1-201ENST00000321442 CTAGE9A4FU28 777 aa18.69■□□□□ 0.58
SFXN1-201ENST00000321442 USP8P40818 1118 aa18.69■□□□□ 0.58
SFXN1-201ENST00000321442 KANK3Q6NY19 840 aa18.69■□□□□ 0.58
SFXN1-201ENST00000321442 MKNK2Q9HBH9 465 aa18.69■□□□□ 0.58
SFXN1-201ENST00000321442 DIP2BQ9P265 1576 aa18.69■□□□□ 0.58
SFXN1-201ENST00000321442 EYA2O00167 538 aa18.69■□□□□ 0.58
SFXN1-201ENST00000321442 HOXB7P09629 217 aa18.69■□□□□ 0.58
SFXN1-201ENST00000321442 CYP7A1P22680 504 aa18.69■□□□□ 0.58
SFXN1-201ENST00000321442 FKBP15Q5T1M5 1219 aa18.69■□□□□ 0.58
SFXN1-201ENST00000321442 BCCIPQ9P287 314 aaKnown RBP eCLIP18.69■□□□□ 0.58
SFXN1-201ENST00000321442 MPHOSPH10O00566 681 aaKnown RBP18.69■□□□□ 0.58
SFXN1-201ENST00000321442 ZFYP08048 801 aaPredicted RBP18.69■□□□□ 0.58
SFXN1-201ENST00000321442 BRAPQ7Z569 592 aa18.69■□□□□ 0.58
SFXN1-201ENST00000321442 PIGBQ92521 554 aa18.69■□□□□ 0.58
SFXN1-201ENST00000321442 LMTK2Q8IWU2 1503 aa18.69■□□□□ 0.58
SFXN1-201ENST00000321442 HLTFQ14527 1009 aaKnown RBP eCLIP18.68■□□□□ 0.582e-6■■■■□ 23.7
SFXN1-201ENST00000321442 ARID5BQ14865 1188 aa18.68■□□□□ 0.58
SFXN1-201ENST00000321442 RTN1Q16799 776 aa18.68■□□□□ 0.58
SFXN1-201ENST00000321442 TRIM47Q96LD4 638 aa18.68■□□□□ 0.58
SFXN1-201ENST00000321442 CCDC194A0A1B0GVG4 234 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms