RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 SPDYE2Q495Y8 402 aa22.1■■□□□ 1.13
TPM1-203ENST00000317516 ATF7IPQ6VMQ6 1270 aa22.1■■□□□ 1.13
TPM1-203ENST00000317516 SLC10A4Q96EP9 437 aa22.1■■□□□ 1.13
TPM1-203ENST00000317516 TDRD3Q9H7E2 651 aaKnown RBP22.1■■□□□ 1.13
TPM1-203ENST00000317516 GNL3LQ9NVN8 582 aaKnown RBP22.1■■□□□ 1.13
TPM1-203ENST00000317516 MAST3O60307 1309 aa22.09■■□□□ 1.13
TPM1-203ENST00000317516 TNNI2P48788 182 aa22.09■■□□□ 1.13
TPM1-203ENST00000317516 MAP3K11Q16584 847 aa22.09■■□□□ 1.13
TPM1-203ENST00000317516 WDR66Q8TBY9 1149 aa22.09■■□□□ 1.13
TPM1-203ENST00000317516 TEKT1Q969V4 418 aa22.09■■□□□ 1.13
TPM1-203ENST00000317516 COPRSQ9NQ92 184 aa22.09■■□□□ 1.13
TPM1-203ENST00000317516 IREB2P48200 963 aaKnown RBP22.08■■□□□ 1.13
TPM1-203ENST00000317516 TM4SF4P48230 202 aa22.08■■□□□ 1.13
TPM1-203ENST00000317516 SREBF2Q12772 1141 aa22.08■■□□□ 1.13
TPM1-203ENST00000317516 ATP2B3Q16720 1220 aa22.08■■□□□ 1.13
TPM1-203ENST00000317516 NBPF12Q5TAG4 269 aaPredicted RBP22.08■■□□□ 1.13
TPM1-203ENST00000317516 A0A1B0GUL6 1792 aa22.07■■□□□ 1.12
TPM1-203ENST00000317516 BCAR3O75815 825 aa22.07■■□□□ 1.12
TPM1-203ENST00000317516 TRIM27P14373 513 aa22.07■■□□□ 1.12
TPM1-203ENST00000317516 SPRYD7Q5W111 196 aa22.06■■□□□ 1.12
TPM1-203ENST00000317516 TMOD2Q9NZR1 351 aa22.06■■□□□ 1.12
TPM1-203ENST00000317516 AOX1Q06278 1338 aa22.06■■□□□ 1.12
TPM1-203ENST00000317516 TCP10L2B9ZVM9 353 aa22.05■■□□□ 1.12
TPM1-203ENST00000317516 SRGAP3O43295 1099 aa22.05■■□□□ 1.12
TPM1-203ENST00000317516 INHBEP58166 350 aa22.05■■□□□ 1.12
TPM1-203ENST00000317516 MKRN3Q13064 507 aaKnown RBP22.05■■□□□ 1.12
TPM1-203ENST00000317516 DGKZQ13574 1117 aa22.05■■□□□ 1.12
TPM1-203ENST00000317516 GRIK5Q16478 980 aa22.05■■□□□ 1.12
TPM1-203ENST00000317516 ZKSCAN2Q63HK3 967 aa22.05■■□□□ 1.12
TPM1-203ENST00000317516 ZDHHC15Q96MV8 337 aa22.05■■□□□ 1.12
TPM1-203ENST00000317516 PA2G4Q9UQ80 394 aaKnown RBP22.05■■□□□ 1.12
TPM1-203ENST00000317516 GNAI2P04899 355 aa22.04■■□□□ 1.12
TPM1-203ENST00000317516 MTX1Q13505 466 aa22.04■■□□□ 1.12
TPM1-203ENST00000317516 HHIPL2Q6UWX4 724 aa22.04■■□□□ 1.12
TPM1-203ENST00000317516 ANKRD13AQ8IZ07 590 aa22.04■■□□□ 1.12
TPM1-203ENST00000317516 CLUAP1Q96AJ1 413 aa22.04■■□□□ 1.12
TPM1-203ENST00000317516 MCOLN1Q9GZU1 580 aa22.04■■□□□ 1.12
TPM1-203ENST00000317516 FZD1Q9UP38 647 aa22.04■■□□□ 1.12
TPM1-203ENST00000317516 MANSC4A6NHS7 340 aaPredicted RBP22.03■■□□□ 1.12
TPM1-203ENST00000317516 SEMA3EO15041 775 aa22.03■■□□□ 1.12
TPM1-203ENST00000317516 USP2O75604 605 aaPredicted RBP22.03■■□□□ 1.12
TPM1-203ENST00000317516 ZBTB48P10074 688 aaPredicted RBP22.03■■□□□ 1.12
TPM1-203ENST00000317516 DENND2AQ9ULE3 1009 aa22.03■■□□□ 1.12
TPM1-203ENST00000317516 AKAP2Q9Y2D5 859 aa22.03■■□□□ 1.12
TPM1-203ENST00000317516 ALDH1A1P00352 501 aa22.02■■□□□ 1.12
TPM1-203ENST00000317516 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.02■■□□□ 1.12
TPM1-203ENST00000317516 CCDC85CA6NKD9 419 aa22.01■■□□□ 1.11
TPM1-203ENST00000317516 FKBP1CQ5VVH2 108 aa22.01■■□□□ 1.11
TPM1-203ENST00000317516 HOOK2Q96ED9 719 aa22.01■■□□□ 1.11
TPM1-203ENST00000317516 TBC1D8O95759 1140 aa22■■□□□ 1.11
TPM1-203ENST00000317516 LDHBP07195 334 aaKnown RBP22■■□□□ 1.11
TPM1-203ENST00000317516 APOBEC3HQ6NTF7 200 aaKnown RBP22■■□□□ 1.11
TPM1-203ENST00000317516 FAM83AQ86UY5 434 aa22■■□□□ 1.11
TPM1-203ENST00000317516 ZGPATQ8N5A5 531 aaKnown RBP22■■□□□ 1.11
TPM1-203ENST00000317516 WNK4Q96J92 1243 aa22■■□□□ 1.11
TPM1-203ENST00000317516 CLMNQ96JQ2 1002 aa22■■□□□ 1.11
TPM1-203ENST00000317516 TEPSINQ96N21 525 aa22■■□□□ 1.11
TPM1-203ENST00000317516 TMEM39BQ9GZU3 492 aa22■■□□□ 1.11
TPM1-203ENST00000317516 ZBTB22O15209 634 aa21.99■■□□□ 1.11
TPM1-203ENST00000317516 TIMM10P62072 90 aa21.99■■□□□ 1.11
TPM1-203ENST00000317516 CCDC102BQ68D86 513 aa21.99■■□□□ 1.11
TPM1-203ENST00000317516 PHKA1P46020 1223 aa21.98■■□□□ 1.11
TPM1-203ENST00000317516 G3BP1Q13283 466 aaKnown RBP eCLIP21.98■■□□□ 1.11
TPM1-203ENST00000317516 NOM1Q5C9Z4 860 aaKnown RBP21.98■■□□□ 1.11
TPM1-203ENST00000317516 OTUD7BQ6GQQ9 843 aa21.98■■□□□ 1.11
TPM1-203ENST00000317516 FTSJ3Q8IY81 847 aaKnown RBP21.98■■□□□ 1.11
TPM1-203ENST00000317516 TNNQ9UQP3 1299 aa21.98■■□□□ 1.11
TPM1-203ENST00000317516 SSC5DA1L4H1 1573 aa21.98■■□□□ 1.11
TPM1-203ENST00000317516 SALL1Q9NSC2 1324 aa21.98■■□□□ 1.11
TPM1-203ENST00000317516 A0A1B0GUL7 405 aa21.97■■□□□ 1.11
TPM1-203ENST00000317516 CACNB3P54284 484 aa21.97■■□□□ 1.11
TPM1-203ENST00000317516 MAP3K9P80192 1104 aa21.97■■□□□ 1.11
TPM1-203ENST00000317516 TFCP2Q12800 502 aa21.97■■□□□ 1.11
TPM1-203ENST00000317516 MVPQ14764 893 aaKnown RBP21.97■■□□□ 1.11
TPM1-203ENST00000317516 CTU1Q7Z7A3 348 aaKnown RBP21.97■■□□□ 1.11
TPM1-203ENST00000317516 TMEM57Q8N5G2 664 aa21.97■■□□□ 1.11
TPM1-203ENST00000317516 CFHR5Q9BXR6 569 aa21.97■■□□□ 1.11
TPM1-203ENST00000317516 CSADQ9Y600 493 aa21.96■■□□□ 1.11
TPM1-203ENST00000317516 GPR25O00155 361 aa21.95■■□□□ 1.1
TPM1-203ENST00000317516 PRDX5P30044 214 aa21.95■■□□□ 1.1
TPM1-203ENST00000317516 ADORA1P30542 326 aa21.95■■□□□ 1.1
TPM1-203ENST00000317516 SPTY2D1Q68D10 685 aaPredicted RBP21.95■■□□□ 1.1
TPM1-203ENST00000317516 IFNL1Q8IU54 200 aa21.95■■□□□ 1.1
TPM1-203ENST00000317516 SLF2Q8IX21 1173 aa21.95■■□□□ 1.1
TPM1-203ENST00000317516 ZNF296Q8WUU4 475 aaPredicted RBP21.95■■□□□ 1.1
TPM1-203ENST00000317516 XAGE2Q96GT9 111 aa21.95■■□□□ 1.1
TPM1-203ENST00000317516 NEUROD6Q96NK8 337 aa21.95■■□□□ 1.1
TPM1-203ENST00000317516 ELP3Q9H9T3 547 aa21.95■■□□□ 1.1
TPM1-203ENST00000317516 CASP8AP2Q9UKL3 1982 aa21.95■■□□□ 1.1
TPM1-203ENST00000317516 ZBED9Q6R2W3 1325 aa21.95■■□□□ 1.1
TPM1-203ENST00000317516 PKN2Q16513 984 aaKnown RBP21.94■■□□□ 1.1
TPM1-203ENST00000317516 GORABQ5T7V8 394 aa21.94■■□□□ 1.1
TPM1-203ENST00000317516 DCAF15Q66K64 600 aa21.94■■□□□ 1.1
TPM1-203ENST00000317516 CDAN1Q8IWY9 1227 aa21.94■■□□□ 1.1
TPM1-203ENST00000317516 DAGLAQ9Y4D2 1042 aa21.94■■□□□ 1.1
TPM1-203ENST00000317516 PNMA6EA0A0J9YXQ4 647 aa21.93■■□□□ 1.1
TPM1-203ENST00000317516 DIXDC1Q155Q3 683 aa21.93■■□□□ 1.1
TPM1-203ENST00000317516 PDS5AQ29RF7 1337 aaKnown RBP21.93■■□□□ 1.1
TPM1-203ENST00000317516 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.93■■□□□ 1.1
TPM1-203ENST00000317516 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms