RNA–Protein interactions for RNA: ENST00000317201.6

HOXA3-201, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXA3, Length 2,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-201ENST00000317201 ZMYM1Q5SVZ6 1142 aa17.27■□□□□ 0.35
HOXA3-201ENST00000317201 FOXD4L5Q5VV16 416 aaPredicted RBP17.27■□□□□ 0.35
HOXA3-201ENST00000317201 FOXD4L4Q8WXT5 416 aaPredicted RBP17.27■□□□□ 0.35
HOXA3-201ENST00000317201 RNF113AO15541 343 aaKnown RBP17.26■□□□□ 0.35
HOXA3-201ENST00000317201 TAF5LO75529 589 aa17.26■□□□□ 0.35
HOXA3-201ENST00000317201 PROM2Q8N271 834 aa17.26■□□□□ 0.35
HOXA3-201ENST00000317201 MYCBPQ99417 103 aaPredicted RBP17.26■□□□□ 0.35
HOXA3-201ENST00000317201 HMG20BQ9P0W2 317 aa17.26■□□□□ 0.35
HOXA3-201ENST00000317201 AKAP11Q9UKA4 1901 aa17.26■□□□□ 0.35
HOXA3-201ENST00000317201 PHF14O94880 888 aa17.26■□□□□ 0.35
HOXA3-201ENST00000317201 PLCB2Q00722 1185 aa17.26■□□□□ 0.35
HOXA3-201ENST00000317201 NFIXQ14938 502 aa17.26■□□□□ 0.35
HOXA3-201ENST00000317201 TSGA10IPQ3SY00 556 aa17.26■□□□□ 0.35
HOXA3-201ENST00000317201 C3orf67Q6ZVT6 689 aa17.26■□□□□ 0.35
HOXA3-201ENST00000317201 KRT222Q8N1A0 295 aa17.26■□□□□ 0.35
HOXA3-201ENST00000317201 KIF18AQ8NI77 898 aa17.26■□□□□ 0.35
HOXA3-201ENST00000317201 MORC2Q9Y6X9 1032 aaPredicted RBP17.26■□□□□ 0.35
HOXA3-201ENST00000317201 NEK4P51957 841 aa17.25■□□□□ 0.35
HOXA3-201ENST00000317201 RNF20Q5VTR2 975 aa17.25■□□□□ 0.35
HOXA3-201ENST00000317201 CCDC102BQ68D86 513 aa17.25■□□□□ 0.35
HOXA3-201ENST00000317201 USP25Q9UHP3 1055 aa17.25■□□□□ 0.35
HOXA3-201ENST00000317201 CHRNDQ07001 517 aa17.25■□□□□ 0.35
HOXA3-201ENST00000317201 RBM8AQ9Y5S9 174 aaKnown RBP17.25■□□□□ 0.35
HOXA3-201ENST00000317201 NDUFB9Q9Y6M9 179 aa17.25■□□□□ 0.35
HOXA3-201ENST00000317201 GYS1P13807 737 aa17.24■□□□□ 0.35
HOXA3-201ENST00000317201 ZKSCAN1P17029 563 aaPredicted RBP17.24■□□□□ 0.35
HOXA3-201ENST00000317201 UBE4AQ14139 1066 aa17.24■□□□□ 0.35
HOXA3-201ENST00000317201 ZSCAN25Q6NSZ9 544 aa17.24■□□□□ 0.35
HOXA3-201ENST00000317201 TNS1Q9HBL0 1735 aaKnown RBP17.24■□□□□ 0.35
HOXA3-201ENST00000317201 TM4SF1P30408 202 aa17.24■□□□□ 0.35
HOXA3-201ENST00000317201 MCAMP43121 646 aa17.24■□□□□ 0.35
HOXA3-201ENST00000317201 FKBP4Q02790 459 aaKnown RBP eCLIP17.24■□□□□ 0.35
HOXA3-201ENST00000317201 TPRNQ4KMQ1 711 aa17.24■□□□□ 0.35
HOXA3-201ENST00000317201 ZNF589Q86UQ0 364 aaPredicted RBP17.24■□□□□ 0.35
HOXA3-201ENST00000317201 RASSF4Q9H2L5 321 aa17.24■□□□□ 0.35
HOXA3-201ENST00000317201 CTIFO43310 598 aaKnown RBP17.23■□□□□ 0.35
HOXA3-201ENST00000317201 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.23■□□□□ 0.35
HOXA3-201ENST00000317201 U3KPZ7 1027 aaPredicted RBP17.23■□□□□ 0.35
HOXA3-201ENST00000317201 ZAP70P43403 619 aa17.23■□□□□ 0.35
HOXA3-201ENST00000317201 SCARF1Q14162 830 aa17.23■□□□□ 0.35
HOXA3-201ENST00000317201 CREB3L3Q68CJ9 461 aa17.23■□□□□ 0.35
HOXA3-201ENST00000317201 RASEFQ8IZ41 740 aa17.23■□□□□ 0.35
HOXA3-201ENST00000317201 FLAD1Q8NFF5 587 aa17.23■□□□□ 0.35
HOXA3-201ENST00000317201 DSCC1Q9BVC3 393 aa17.23■□□□□ 0.35
HOXA3-201ENST00000317201 COL4A1P02462 1669 aa17.23■□□□□ 0.35
HOXA3-201ENST00000317201 RPS8P62241 208 aaKnown RBP17.23■□□□□ 0.35
HOXA3-201ENST00000317201 SART3Q15020 963 aaKnown RBP17.23■□□□□ 0.35
HOXA3-201ENST00000317201 DNAJC21Q5F1R6 531 aaKnown RBP17.23■□□□□ 0.35
HOXA3-201ENST00000317201 CNBD1Q8NA66 436 aa17.23■□□□□ 0.35
HOXA3-201ENST00000317201 AKT1S1Q96B36 256 aa17.23■□□□□ 0.35
HOXA3-201ENST00000317201 DRC1Q96MC2 740 aa17.23■□□□□ 0.35
HOXA3-201ENST00000317201 MYH7P12883 1935 aa17.22■□□□□ 0.35
HOXA3-201ENST00000317201 TNRC6CQ9HCJ0 1690 aaKnown RBP17.22■□□□□ 0.35
HOXA3-201ENST00000317201 PRPF40BQ6NWY9 871 aaKnown RBP17.22■□□□□ 0.35
HOXA3-201ENST00000317201 PHKA1P46020 1223 aa17.22■□□□□ 0.35
HOXA3-201ENST00000317201 ICE2Q659A1 982 aa17.22■□□□□ 0.35
HOXA3-201ENST00000317201 HELBQ8NG08 1087 aaPredicted RBP17.22■□□□□ 0.35
HOXA3-201ENST00000317201 FBXO41Q8TF61 875 aa17.22■□□□□ 0.35
HOXA3-201ENST00000317201 NCAPGQ9BPX3 1015 aa17.22■□□□□ 0.35
HOXA3-201ENST00000317201 ANKRD2Q9GZV1 360 aa17.22■□□□□ 0.35
HOXA3-201ENST00000317201 ZSWIM6Q9HCJ5 1215 aa17.22■□□□□ 0.35
HOXA3-201ENST00000317201 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.22■□□□□ 0.35
HOXA3-201ENST00000317201 PYCARDQ9ULZ3 195 aa17.22■□□□□ 0.35
HOXA3-201ENST00000317201 V9GYY5 206 aaPredicted RBP17.22■□□□□ 0.35
HOXA3-201ENST00000317201 RPAP1Q9BWH6 1393 aaPredicted RBP17.21■□□□□ 0.35
HOXA3-201ENST00000317201 SLC27A2O14975 620 aa17.21■□□□□ 0.35
HOXA3-201ENST00000317201 APBA3O96018 575 aa17.21■□□□□ 0.35
HOXA3-201ENST00000317201 PSMA5P28066 241 aa17.21■□□□□ 0.35
HOXA3-201ENST00000317201 CWC22Q9HCG8 908 aaKnown RBP17.21■□□□□ 0.35
HOXA3-201ENST00000317201 RGS17Q9UGC6 210 aaPredicted RBP17.21■□□□□ 0.35
HOXA3-201ENST00000317201 MINPP1Q9UNW1 487 aa17.21■□□□□ 0.35
HOXA3-201ENST00000317201 ZNF804BA4D1E1 1349 aa17.21■□□□□ 0.35
HOXA3-201ENST00000317201 KRT32Q14532 448 aa17.21■□□□□ 0.35
HOXA3-201ENST00000317201 TTC14Q96N46 770 aa17.21■□□□□ 0.35
HOXA3-201ENST00000317201 SPTLC3Q9NUV7 552 aa17.21■□□□□ 0.35
HOXA3-201ENST00000317201 APPBP2Q92624 585 aa17.2■□□□□ 0.34
HOXA3-201ENST00000317201 CELF1Q92879 486 aaKnown RBP17.2■□□□□ 0.34
HOXA3-201ENST00000317201 DOCK2Q92608 1830 aa17.2■□□□□ 0.34
HOXA3-201ENST00000317201 CYP2E1P05181 493 aaPredicted RBP17.2■□□□□ 0.34
HOXA3-201ENST00000317201 UBE3CQ15386 1083 aa17.2■□□□□ 0.34
HOXA3-201ENST00000317201 EGFL6Q8IUX8 553 aa17.2■□□□□ 0.34
HOXA3-201ENST00000317201 NEK11Q8NG66 645 aa17.2■□□□□ 0.34
HOXA3-201ENST00000317201 ALDH8A1Q9H2A2 487 aaPredicted RBP17.2■□□□□ 0.34
HOXA3-201ENST00000317201 LCMT1Q9UIC8 334 aa17.2■□□□□ 0.34
HOXA3-201ENST00000317201 CEP83Q9Y592 693 aa17.2■□□□□ 0.34
HOXA3-201ENST00000317201 MAST3O60307 1309 aa17.19■□□□□ 0.34
HOXA3-201ENST00000317201 CUL4AQ13619 759 aa17.19■□□□□ 0.34
HOXA3-201ENST00000317201 VPS53Q5VIR6 699 aa17.19■□□□□ 0.34
HOXA3-201ENST00000317201 PRR5LQ6MZQ0 368 aa17.19■□□□□ 0.34
HOXA3-201ENST00000317201 SYT10Q6XYQ8 523 aa17.19■□□□□ 0.34
HOXA3-201ENST00000317201 SPATA5Q8NB90 893 aa17.19■□□□□ 0.34
HOXA3-201ENST00000317201 ST5P78524 1137 aa17.19■□□□□ 0.34
HOXA3-201ENST00000317201 CRY2Q49AN0 593 aa17.19■□□□□ 0.34
HOXA3-201ENST00000317201 INTS4Q96HW7 963 aaKnown RBP17.19■□□□□ 0.34
HOXA3-201ENST00000317201 SEC62Q99442 399 aaKnown RBP17.19■□□□□ 0.34
HOXA3-201ENST00000317201 FAM212AQ96EL1 285 aa17.18■□□□□ 0.34
HOXA3-201ENST00000317201 NPHP1O15259 732 aa17.18■□□□□ 0.34
HOXA3-201ENST00000317201 ADCY5O95622 1261 aa17.18■□□□□ 0.34
HOXA3-201ENST00000317201 SERPINB2P05120 415 aa17.18■□□□□ 0.34
HOXA3-201ENST00000317201 ADD2P35612 726 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 188.9 ms