RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 DDX11Q96FC9 970 aa21.67■■□□□ 1.06
CCDC43-201ENST00000315286 NAP1L2Q9ULW6 460 aaPredicted RBP21.67■■□□□ 1.06
CCDC43-201ENST00000315286 CTDNEP1O95476 244 aa21.67■■□□□ 1.06
CCDC43-201ENST00000315286 EVCP57679 992 aa21.67■■□□□ 1.06
CCDC43-201ENST00000315286 ANTXR2P58335 489 aa21.67■■□□□ 1.06
CCDC43-201ENST00000315286 ALX1Q15699 326 aa21.67■■□□□ 1.06
CCDC43-201ENST00000315286 KRT27Q7Z3Y8 459 aa21.67■■□□□ 1.06
CCDC43-201ENST00000315286 RALYLQ86SE5 291 aaKnown RBP21.67■■□□□ 1.06
CCDC43-201ENST00000315286 FERMT3Q86UX7 667 aa21.67■■□□□ 1.06
CCDC43-201ENST00000315286 TBC1D10CQ8IV04 446 aa21.67■■□□□ 1.06
CCDC43-201ENST00000315286 DENND2AQ9ULE3 1009 aa21.67■■□□□ 1.06
CCDC43-201ENST00000315286 ADRA2BP18089 450 aa21.66■■□□□ 1.06
CCDC43-201ENST00000315286 VPS37DQ86XT2 251 aa21.66■■□□□ 1.06
CCDC43-201ENST00000315286 IFNL3Q8IZI9 196 aa21.66■■□□□ 1.06
CCDC43-201ENST00000315286 NSUN7Q8NE18 718 aaKnown RBP21.66■■□□□ 1.06
CCDC43-201ENST00000315286 PANK2Q9BZ23 570 aa21.66■■□□□ 1.06
CCDC43-201ENST00000315286 NCOA5Q9HCD5 579 aaKnown RBP21.66■■□□□ 1.06
CCDC43-201ENST00000315286 EPB41L4AQ9HCS5 686 aaPredicted RBP21.66■■□□□ 1.06
CCDC43-201ENST00000315286 CARMIL3Q8ND23 1372 aa21.66■■□□□ 1.06
CCDC43-201ENST00000315286 UBR3Q6ZT12 1888 aa21.66■■□□□ 1.06
CCDC43-201ENST00000315286 COL1A1P02452 1464 aaPredicted RBP21.65■■□□□ 1.06
CCDC43-201ENST00000315286 FIBPO43427 364 aa21.65■■□□□ 1.06
CCDC43-201ENST00000315286 TRIM37O94972 964 aa21.65■■□□□ 1.06
CCDC43-201ENST00000315286 KLRK1P26718 216 aa21.65■■□□□ 1.06
CCDC43-201ENST00000315286 ABCF2Q9UG63 623 aa21.65■■□□□ 1.06
CCDC43-201ENST00000315286 TNRC6CQ9HCJ0 1690 aaKnown RBP21.65■■□□□ 1.06
CCDC43-201ENST00000315286 LCORLQ8N3X6 602 aa21.65■■□□□ 1.06
CCDC43-201ENST00000315286 NKX2-3Q8TAU0 364 aa21.65■■□□□ 1.06
CCDC43-201ENST00000315286 GSG1L2A8MUP6 293 aa21.64■■□□□ 1.05
CCDC43-201ENST00000315286 PRKAB2O43741 272 aa21.64■■□□□ 1.05
CCDC43-201ENST00000315286 TRDNQ13061 729 aa21.64■■□□□ 1.05
CCDC43-201ENST00000315286 FBXO33Q7Z6M2 555 aa21.64■■□□□ 1.05
CCDC43-201ENST00000315286 ANKRD2Q9GZV1 360 aa21.64■■□□□ 1.05
CCDC43-201ENST00000315286 MIGA1Q8NAN2 632 aa21.64■■□□□ 1.05
CCDC43-201ENST00000315286 FAM184AQ8NB25 1140 aa21.64■■□□□ 1.05
CCDC43-201ENST00000315286 PTPDC1A2A3K4 754 aa21.63■■□□□ 1.05
CCDC43-201ENST00000315286 CYP7A1P22680 504 aa21.63■■□□□ 1.05
CCDC43-201ENST00000315286 SLC27A3Q5K4L6 730 aa21.63■■□□□ 1.05
CCDC43-201ENST00000315286 FAM173BQ6P4H8 233 aa21.63■■□□□ 1.05
CCDC43-201ENST00000315286 ADGRA1Q86SQ6 560 aa21.63■■□□□ 1.05
CCDC43-201ENST00000315286 CNBD1Q8NA66 436 aa21.63■■□□□ 1.05
CCDC43-201ENST00000315286 NAPBQ9H115 298 aa21.63■■□□□ 1.05
CCDC43-201ENST00000315286 RAI14Q9P0K7 980 aa21.63■■□□□ 1.05
CCDC43-201ENST00000315286 ZMYM6O95789 1325 aa21.63■■□□□ 1.05
CCDC43-201ENST00000315286 PNPLA7Q6ZV29 1317 aa21.63■■□□□ 1.05
CCDC43-201ENST00000315286 WDR19Q8NEZ3 1342 aa21.63■■□□□ 1.05
CCDC43-201ENST00000315286 GYS1P13807 737 aa21.62■■□□□ 1.05
CCDC43-201ENST00000315286 CYB5R4Q7L1T6 521 aa21.62■■□□□ 1.05
CCDC43-201ENST00000315286 TFCP2L1Q9NZI6 479 aa21.62■■□□□ 1.05
CCDC43-201ENST00000315286 SLC4A4Q9Y6R1 1079 aa21.62■■□□□ 1.05
CCDC43-201ENST00000315286 KLF18A0A0U1RQI7 1052 aa21.61■■□□□ 1.05
CCDC43-201ENST00000315286 GNAT2P19087 354 aa21.61■■□□□ 1.05
CCDC43-201ENST00000315286 HMGN5P82970 282 aaKnown RBP21.61■■□□□ 1.05
CCDC43-201ENST00000315286 INCENPQ9NQS7 918 aa21.61■■□□□ 1.05
CCDC43-201ENST00000315286 SALL1Q9NSC2 1324 aa21.61■■□□□ 1.05
CCDC43-201ENST00000315286 UBE2HP62256 183 aa21.6■■□□□ 1.05
CCDC43-201ENST00000315286 PRR5LQ6MZQ0 368 aa21.6■■□□□ 1.05
CCDC43-201ENST00000315286 NEDD4P46934 1319 aa21.6■■□□□ 1.05
CCDC43-201ENST00000315286 SYCE3A1L190 88 aa21.6■■□□□ 1.05
CCDC43-201ENST00000315286 B4E1Z4 1266 aa21.6■■□□□ 1.05
CCDC43-201ENST00000315286 H3BQV1 296 aa21.6■■□□□ 1.05
CCDC43-201ENST00000315286 PPFIA3O75145 1194 aa21.6■■□□□ 1.05
CCDC43-201ENST00000315286 HIBADHP31937 336 aaKnown RBP21.6■■□□□ 1.05
CCDC43-201ENST00000315286 CTDSPL2Q05D32 466 aa21.6■■□□□ 1.05
CCDC43-201ENST00000315286 CSPP1Q1MSJ5 1256 aa21.6■■□□□ 1.05
CCDC43-201ENST00000315286 TPRNQ4KMQ1 711 aa21.6■■□□□ 1.05
CCDC43-201ENST00000315286 IFFO2Q5TF58 517 aa21.6■■□□□ 1.05
CCDC43-201ENST00000315286 HPS5Q9UPZ3 1129 aa21.6■■□□□ 1.05
CCDC43-201ENST00000315286 CHD4Q14839 1912 aa21.59■■□□□ 1.05
CCDC43-201ENST00000315286 CACNA1SQ13698 1873 aa21.59■■□□□ 1.05
CCDC43-201ENST00000315286 SEMA3EO15041 775 aa21.59■■□□□ 1.05
CCDC43-201ENST00000315286 CHMP4CQ96CF2 233 aa21.59■■□□□ 1.05
CCDC43-201ENST00000315286 KRT85P78386 507 aa21.59■■□□□ 1.05
CCDC43-201ENST00000315286 GRAPQ13588 217 aa21.59■■□□□ 1.05
CCDC43-201ENST00000315286 SLC51AQ86UW1 340 aa21.59■■□□□ 1.05
CCDC43-201ENST00000315286 TXNRD3Q86VQ6 643 aa21.59■■□□□ 1.05
CCDC43-201ENST00000315286 GRAPLQ8TC17 118 aaPredicted RBP21.59■■□□□ 1.05
CCDC43-201ENST00000315286 NACAP1Q9BZK3 213 aa21.59■■□□□ 1.05
CCDC43-201ENST00000315286 TACC3Q9Y6A5 838 aa21.59■■□□□ 1.05
CCDC43-201ENST00000315286 GOLGA8BA8MQT2 603 aa21.58■■□□□ 1.05
CCDC43-201ENST00000315286 TDO2P48775 406 aa21.58■■□□□ 1.05
CCDC43-201ENST00000315286 RESTQ13127 1097 aa21.58■■□□□ 1.05
CCDC43-201ENST00000315286 RAB11FIP4Q86YS3 637 aa21.58■■□□□ 1.05
CCDC43-201ENST00000315286 PROM2Q8N271 834 aa21.58■■□□□ 1.05
CCDC43-201ENST00000315286 MYH13Q9UKX3 1938 aa21.58■■□□□ 1.04
CCDC43-201ENST00000315286 MAGEB6P1A0A0J9YX57 407 aa21.57■■□□□ 1.04
CCDC43-201ENST00000315286 ZNF384Q8TF68 577 aa21.57■■□□□ 1.04
CCDC43-201ENST00000315286 SYAP1Q96A49 352 aaPredicted RBP21.57■■□□□ 1.04
CCDC43-201ENST00000315286 ANGEL1Q9UNK9 670 aaKnown RBP21.57■■□□□ 1.04
CCDC43-201ENST00000315286 SH2B2O14492 632 aaPredicted RBP21.57■■□□□ 1.04
CCDC43-201ENST00000315286 FDPSP14324 419 aaKnown RBP21.57■■□□□ 1.04
CCDC43-201ENST00000315286 FOSBP53539 338 aa21.57■■□□□ 1.04
CCDC43-201ENST00000315286 LRSAM1Q6UWE0 723 aa21.57■■□□□ 1.04
CCDC43-201ENST00000315286 TTC6Q86TZ1 520 aa21.57■■□□□ 1.04
CCDC43-201ENST00000315286 KIF3AQ9Y496 699 aa21.57■■□□□ 1.04
CCDC43-201ENST00000315286 IRS2Q9Y4H2 1338 aa21.56■■□□□ 1.04
CCDC43-201ENST00000315286 SERPINB2P05120 415 aa21.56■■□□□ 1.04
CCDC43-201ENST00000315286 TXNRD1Q16881 649 aa21.56■■□□□ 1.04
CCDC43-201ENST00000315286 AKNAD1Q5T1N1 836 aa21.56■■□□□ 1.04
CCDC43-201ENST00000315286 NAA16Q6N069 864 aaPredicted RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms