RNA–Protein interactions for RNA: ENST00000308008.10

RAPGEF6-202, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF6, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-202ENST00000308008 IQGAP3Q86VI3 1631 aa3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 A0A0G2JS52 829 aa3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 SYCE3A1L190 88 aa3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 EME2A4GXA9 379 aaPredicted RBP3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 COQ9O75208 318 aa3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 RTN2O75298 545 aa3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 SEC13P55735 322 aa3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 ARHGAP4P98171 946 aa3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 EHHADHQ08426 723 aa3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 KIAA2012Q0VF49 1180 aa3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 PAK2Q13177 524 aa3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 CCDC102BQ68D86 513 aa3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 HS2ST1Q7LGA3 356 aa3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 NOL10Q9BSC4 688 aaKnown RBP3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 PDZRN3Q9UPQ7 1066 aa3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 SPG7Q9UQ90 795 aa3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 PITPNM2Q9BZ72 1349 aa3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 ESYT3A0FGR9 886 aa3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 NBPF7P0C2Y1 421 aaPredicted RBP3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 XRCC5P13010 732 aaKnown RBP3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 SCP2P22307 547 aa3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 CLDN10P78369 228 aa3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 C1QBPQ07021 282 aaKnown RBP3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 NR1H3Q13133 447 aa3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 CBLBQ13191 982 aa3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 JAMLQ86YT9 394 aa3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 SLF2Q8IX21 1173 aa3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 C10orf67Q8IYJ2 551 aa3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 PLPP7Q8NBV4 271 aa3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 TSEN2Q8NCE0 465 aaKnown RBP3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 ADAMTS8Q9UP79 889 aa3.81□□□□□ -1.8
RAPGEF6-202ENST00000308008 ARHGEF5Q12774 1597 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 CD46P15529 392 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 MZF1P28698 734 aaPredicted RBP3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 TRAPPC10P48553 1259 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 CCDC96Q2M329 555 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 SKOR2Q2VWA4 1001 aaPredicted RBP3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 SUGP1Q8IWZ8 645 aaKnown RBP3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 ATL2Q8NHH9 583 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 MTMR8Q96EF0 704 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 KIF12Q96FN5 646 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 CCDC85AQ96PX6 553 aaPredicted RBP3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 CARD14Q9BXL6 1004 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 UPF2Q9HAU5 1272 aaKnown RBP3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 BRMS1Q9HCU9 246 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 CCDC39Q9UFE4 941 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 CHMP3Q9Y3E7 222 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 WDR90Q96KV7 1748 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 CLTCQ00610 1675 aaKnown RBP3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 GLI3P10071 1580 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 PRDM15P57071 1507 aaPredicted RBP3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 FAM221BA6H8Z2 402 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 SLC26A4O43511 780 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 LIG1P18858 919 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 CACNB1Q02641 598 aaPredicted RBP3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 ELOAQ14241 798 aaKnown RBP3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 MEX3CQ5U5Q3 659 aaKnown RBP3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 TTC39BQ5VTQ0 682 aaPredicted RBP3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 ZNF654Q8IZM8 581 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 TTC16Q8NEE8 873 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 PANK1Q8TE04 598 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 HNRNPLLQ8WVV9 542 aaKnown RBP3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 RNPC3Q96LT9 517 aaKnown RBP3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 DEPDC7Q96QD5 511 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 PURBQ96QR8 312 aaKnown RBP3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 RASSF4Q9H2L5 321 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 ZNF408Q9H9D4 720 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 CXXC1Q9P0U4 656 aaPredicted RBP3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 PCDHGC3Q9UN70 934 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 TRPC6Q9Y210 931 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 NOD1Q9Y239 953 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 FAM50BQ9Y247 325 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 NRAPQ86VF7 1730 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 FYCO1Q9BQS8 1478 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 QRICH2Q9H0J4 1663 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 USP27XA6NNY8 438 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 MINDY4BA8MYZ0 360 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 GOLIM4O00461 696 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 PRPF40AO75400 957 aaKnown RBP3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 CHAF1AQ13111 956 aaPredicted RBP3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 OTUD6BQ8N6M0 293 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 JMYQ8N9B5 988 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 IQUBQ8NA54 791 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 ITFG2Q969R8 447 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 PHF12Q96QT6 1004 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 USP26Q9BXU7 913 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 ZSCAN16Q9H4T2 348 aaPredicted RBP3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 FRMD4BQ9Y2L6 1034 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 ATRNO75882 1429 aa3.8□□□□□ -1.8
RAPGEF6-202ENST00000308008 NRXN3Q9Y4C0 1643 aa3.79□□□□□ -1.8
RAPGEF6-202ENST00000308008 TNFRSF10BO14763 440 aa3.79□□□□□ -1.8
RAPGEF6-202ENST00000308008 CPP00450 1065 aa3.79□□□□□ -1.8
RAPGEF6-202ENST00000308008 ATP1A2P50993 1020 aa3.79□□□□□ -1.8
RAPGEF6-202ENST00000308008 GTF2IP78347 998 aa3.79□□□□□ -1.8
RAPGEF6-202ENST00000308008 DNM1Q05193 864 aaKnown RBP3.79□□□□□ -1.8
RAPGEF6-202ENST00000308008 SWI5Q1ZZU3 235 aa3.79□□□□□ -1.8
RAPGEF6-202ENST00000308008 MEI1Q5TIA1 1274 aa3.79□□□□□ -1.8
RAPGEF6-202ENST00000308008 MORC1Q86VD1 984 aa3.79□□□□□ -1.8
RAPGEF6-202ENST00000308008 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms