RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 MAP3K11Q16584 847 aa22.72■■□□□ 1.23
TMEM88-201ENST00000301599 FRAT1Q92837 279 aaPredicted RBP22.72■■□□□ 1.23
TMEM88-201ENST00000301599 SLC10A4Q96EP9 437 aa22.72■■□□□ 1.23
TMEM88-201ENST00000301599 ABHD8Q96I13 439 aa22.72■■□□□ 1.23
TMEM88-201ENST00000301599 SUGT1Q9Y2Z0 365 aa22.72■■□□□ 1.23
TMEM88-201ENST00000301599 UNCXA6NJT0 531 aa22.71■■□□□ 1.23
TMEM88-201ENST00000301599 TM4SF4P48230 202 aa22.71■■□□□ 1.23
TMEM88-201ENST00000301599 GRIK5Q16478 980 aa22.71■■□□□ 1.23
TMEM88-201ENST00000301599 NBPF12Q5TAG4 269 aaPredicted RBP22.71■■□□□ 1.23
TMEM88-201ENST00000301599 ATF7IPQ6VMQ6 1270 aa22.71■■□□□ 1.23
TMEM88-201ENST00000301599 COPRSQ9NQ92 184 aa22.71■■□□□ 1.23
TMEM88-201ENST00000301599 AOX1Q06278 1338 aa22.71■■□□□ 1.23
TMEM88-201ENST00000301599 ATP2B3Q16720 1220 aa22.7■■□□□ 1.22
TMEM88-201ENST00000301599 WDR66Q8TBY9 1149 aa22.7■■□□□ 1.22
TMEM88-201ENST00000301599 TEKT1Q969V4 418 aa22.7■■□□□ 1.22
TMEM88-201ENST00000301599 GNL3LQ9NVN8 582 aaKnown RBP22.7■■□□□ 1.22
TMEM88-201ENST00000301599 TRIM27P14373 513 aa22.69■■□□□ 1.22
TMEM88-201ENST00000301599 TNNI2P48788 182 aa22.69■■□□□ 1.22
TMEM88-201ENST00000301599 FZD1Q9UP38 647 aa22.69■■□□□ 1.22
TMEM88-201ENST00000301599 PA2G4Q9UQ80 394 aaKnown RBP22.69■■□□□ 1.22
TMEM88-201ENST00000301599 MAST3O60307 1309 aa22.68■■□□□ 1.22
TMEM88-201ENST00000301599 USP2O75604 605 aaPredicted RBP22.68■■□□□ 1.22
TMEM88-201ENST00000301599 IREB2P48200 963 aaKnown RBP22.68■■□□□ 1.22
TMEM88-201ENST00000301599 SREBF2Q12772 1141 aa22.68■■□□□ 1.22
TMEM88-201ENST00000301599 MKRN3Q13064 507 aaKnown RBP22.68■■□□□ 1.22
TMEM88-201ENST00000301599 SPRYD7Q5W111 196 aa22.68■■□□□ 1.22
TMEM88-201ENST00000301599 TCP10L2B9ZVM9 353 aa22.67■■□□□ 1.22
TMEM88-201ENST00000301599 DGKZQ13574 1117 aa22.67■■□□□ 1.22
TMEM88-201ENST00000301599 HHIPL2Q6UWX4 724 aa22.67■■□□□ 1.22
TMEM88-201ENST00000301599 SRGAP3O43295 1099 aa22.66■■□□□ 1.22
TMEM88-201ENST00000301599 INHBEP58166 350 aa22.66■■□□□ 1.22
TMEM88-201ENST00000301599 MTX1Q13505 466 aa22.66■■□□□ 1.22
TMEM88-201ENST00000301599 CLUAP1Q96AJ1 413 aa22.66■■□□□ 1.22
TMEM88-201ENST00000301599 ZDHHC15Q96MV8 337 aa22.66■■□□□ 1.22
TMEM88-201ENST00000301599 MCOLN1Q9GZU1 580 aa22.66■■□□□ 1.22
TMEM88-201ENST00000301599 CASP8AP2Q9UKL3 1982 aa22.66■■□□□ 1.22
TMEM88-201ENST00000301599 GNAI2P04899 355 aa22.65■■□□□ 1.22
TMEM88-201ENST00000301599 ZKSCAN2Q63HK3 967 aa22.65■■□□□ 1.22
TMEM88-201ENST00000301599 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.65■■□□□ 1.22
TMEM88-201ENST00000301599 AKAP11Q9UKA4 1901 aa22.65■■□□□ 1.22
TMEM88-201ENST00000301599 ANKRD13AQ8IZ07 590 aa22.64■■□□□ 1.21
TMEM88-201ENST00000301599 CLMNQ96JQ2 1002 aa22.64■■□□□ 1.21
TMEM88-201ENST00000301599 TEPSINQ96N21 525 aa22.64■■□□□ 1.21
TMEM88-201ENST00000301599 TMOD2Q9NZR1 351 aa22.64■■□□□ 1.21
TMEM88-201ENST00000301599 DENND2AQ9ULE3 1009 aa22.64■■□□□ 1.21
TMEM88-201ENST00000301599 TNNQ9UQP3 1299 aa22.64■■□□□ 1.21
TMEM88-201ENST00000301599 AKAP2Q9Y2D5 859 aa22.64■■□□□ 1.21
TMEM88-201ENST00000301599 ECM29Q5VYK3 1845 aa22.64■■□□□ 1.21
TMEM88-201ENST00000301599 MANSC4A6NHS7 340 aaPredicted RBP22.63■■□□□ 1.21
TMEM88-201ENST00000301599 SEMA3EO15041 775 aa22.63■■□□□ 1.21
TMEM88-201ENST00000301599 ZBTB48P10074 688 aaPredicted RBP22.63■■□□□ 1.21
TMEM88-201ENST00000301599 APOBEC3HQ6NTF7 200 aaKnown RBP22.63■■□□□ 1.21
TMEM88-201ENST00000301599 CCDC85CA6NKD9 419 aa22.62■■□□□ 1.21
TMEM88-201ENST00000301599 ZBTB22O15209 634 aa22.62■■□□□ 1.21
TMEM88-201ENST00000301599 TBC1D8O95759 1140 aa22.62■■□□□ 1.21
TMEM88-201ENST00000301599 TIMM10P62072 90 aa22.62■■□□□ 1.21
TMEM88-201ENST00000301599 FKBP1CQ5VVH2 108 aa22.62■■□□□ 1.21
TMEM88-201ENST00000301599 WNK4Q96J92 1243 aa22.62■■□□□ 1.21
TMEM88-201ENST00000301599 TMEM39BQ9GZU3 492 aa22.62■■□□□ 1.21
TMEM88-201ENST00000301599 SSC5DA1L4H1 1573 aa22.62■■□□□ 1.21
TMEM88-201ENST00000301599 ALDH1A1P00352 501 aa22.61■■□□□ 1.21
TMEM88-201ENST00000301599 PHKA1P46020 1223 aa22.61■■□□□ 1.21
TMEM88-201ENST00000301599 FAM83AQ86UY5 434 aa22.61■■□□□ 1.21
TMEM88-201ENST00000301599 LDHBP07195 334 aaKnown RBP22.6■■□□□ 1.21
TMEM88-201ENST00000301599 TFCP2Q12800 502 aa22.6■■□□□ 1.21
TMEM88-201ENST00000301599 CCDC102BQ68D86 513 aa22.6■■□□□ 1.21
TMEM88-201ENST00000301599 TMEM57Q8N5G2 664 aa22.6■■□□□ 1.21
TMEM88-201ENST00000301599 SALL1Q9NSC2 1324 aa22.59■■□□□ 1.21
TMEM88-201ENST00000301599 ADORA1P30542 326 aa22.59■■□□□ 1.21
TMEM88-201ENST00000301599 CACNB3P54284 484 aa22.59■■□□□ 1.21
TMEM88-201ENST00000301599 MAP3K9P80192 1104 aa22.59■■□□□ 1.21
TMEM88-201ENST00000301599 G3BP1Q13283 466 aaKnown RBP eCLIP22.59■■□□□ 1.21
TMEM88-201ENST00000301599 NOM1Q5C9Z4 860 aaKnown RBP22.59■■□□□ 1.21
TMEM88-201ENST00000301599 HOOK2Q96ED9 719 aa22.59■■□□□ 1.21
TMEM88-201ENST00000301599 CFHR5Q9BXR6 569 aa22.59■■□□□ 1.21
TMEM88-201ENST00000301599 ARAP2Q8WZ64 1704 aa22.58■■□□□ 1.21
TMEM88-201ENST00000301599 A0A1B0GUL7 405 aa22.58■■□□□ 1.21
TMEM88-201ENST00000301599 CDAN1Q8IWY9 1227 aa22.58■■□□□ 1.21
TMEM88-201ENST00000301599 ZGPATQ8N5A5 531 aaKnown RBP22.58■■□□□ 1.21
TMEM88-201ENST00000301599 GPR25O00155 361 aa22.57■■□□□ 1.2
TMEM88-201ENST00000301599 PRDX5P30044 214 aa22.57■■□□□ 1.2
TMEM88-201ENST00000301599 CTU1Q7Z7A3 348 aaKnown RBP22.57■■□□□ 1.2
TMEM88-201ENST00000301599 IFNL1Q8IU54 200 aa22.57■■□□□ 1.2
TMEM88-201ENST00000301599 ZNF296Q8WUU4 475 aaPredicted RBP22.57■■□□□ 1.2
TMEM88-201ENST00000301599 XAGE2Q96GT9 111 aa22.57■■□□□ 1.2
TMEM88-201ENST00000301599 NEUROD6Q96NK8 337 aa22.57■■□□□ 1.2
TMEM88-201ENST00000301599 PNMA6EA0A0J9YXQ4 647 aa22.56■■□□□ 1.2
TMEM88-201ENST00000301599 MVPQ14764 893 aaKnown RBP22.56■■□□□ 1.2
TMEM88-201ENST00000301599 DIXDC1Q155Q3 683 aa22.56■■□□□ 1.2
TMEM88-201ENST00000301599 OTUD7BQ6GQQ9 843 aa22.56■■□□□ 1.2
TMEM88-201ENST00000301599 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.56■■□□□ 1.2
TMEM88-201ENST00000301599 FTSJ3Q8IY81 847 aaKnown RBP22.56■■□□□ 1.2
TMEM88-201ENST00000301599 ELP3Q9H9T3 547 aa22.56■■□□□ 1.2
TMEM88-201ENST00000301599 DAGLAQ9Y4D2 1042 aa22.56■■□□□ 1.2
TMEM88-201ENST00000301599 ZBED9Q6R2W3 1325 aa22.56■■□□□ 1.2
TMEM88-201ENST00000301599 SPTY2D1Q68D10 685 aaPredicted RBP22.55■■□□□ 1.2
TMEM88-201ENST00000301599 CDC42EP5Q6NZY7 148 aa22.55■■□□□ 1.2
TMEM88-201ENST00000301599 CSADQ9Y600 493 aa22.55■■□□□ 1.2
TMEM88-201ENST00000301599 GJA5P36382 358 aa22.54■■□□□ 1.2
TMEM88-201ENST00000301599 ATP8B2P98198 1209 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms