RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 TIAM2Q8IVF5 1701 aa29.31■■■□□ 2.28
ROM1-201ENST00000278833 A0A1W2PQ27 194 aa29.3■■■□□ 2.28
ROM1-201ENST00000278833 A0A1W2PQ64 194 aa29.3■■■□□ 2.28
ROM1-201ENST00000278833 A0A1W2PQD8 194 aa29.3■■■□□ 2.28
ROM1-201ENST00000278833 MCAMP43121 646 aa29.3■■■□□ 2.28
ROM1-201ENST00000278833 SARM1Q6SZW1 724 aa29.3■■■□□ 2.28
ROM1-201ENST00000278833 CCDC125Q86Z20 511 aa29.3■■■□□ 2.28
ROM1-201ENST00000278833 PUS7LQ9H0K6 701 aaKnown RBP29.3■■■□□ 2.28
ROM1-201ENST00000278833 SOCS7O14512 581 aa29.29■■■□□ 2.28
ROM1-201ENST00000278833 FAM160A1Q05DH4 1040 aa29.29■■■□□ 2.28
ROM1-201ENST00000278833 HLFQ16534 295 aa29.29■■■□□ 2.28
ROM1-201ENST00000278833 CCDC73Q6ZRK6 1079 aa29.29■■■□□ 2.28
ROM1-201ENST00000278833 CCAR1Q8IX12 1150 aaKnown RBP29.29■■■□□ 2.28
ROM1-201ENST00000278833 MAP7D2Q96T17 732 aa29.29■■■□□ 2.28
ROM1-201ENST00000278833 GREM2Q9H772 168 aa29.29■■■□□ 2.28
ROM1-201ENST00000278833 HPS5Q9UPZ3 1129 aa29.29■■■□□ 2.28
ROM1-201ENST00000278833 PDE8AO60658 829 aa29.29■■■□□ 2.28
ROM1-201ENST00000278833 ZNF165P49910 485 aa29.29■■■□□ 2.28
ROM1-201ENST00000278833 ANTXR2P58335 489 aa29.29■■■□□ 2.28
ROM1-201ENST00000278833 SNW1Q13573 536 aaKnown RBP29.29■■■□□ 2.28
ROM1-201ENST00000278833 STX1AQ16623 288 aa29.29■■■□□ 2.28
ROM1-201ENST00000278833 LDHAL6AQ6ZMR3 332 aa29.29■■■□□ 2.28
ROM1-201ENST00000278833 ZNF830Q96NB3 372 aaPredicted RBP29.29■■■□□ 2.28
ROM1-201ENST00000278833 UQCRFS1P1P0C7P4 283 aa29.28■■■□□ 2.28
ROM1-201ENST00000278833 IL6STP40189 918 aaPredicted RBP29.28■■■□□ 2.28
ROM1-201ENST00000278833 BRAPQ7Z569 592 aa29.28■■■□□ 2.28
ROM1-201ENST00000278833 TNS1Q9HBL0 1735 aaKnown RBP29.28■■■□□ 2.28
ROM1-201ENST00000278833 ZNF213O14771 459 aa29.27■■■□□ 2.28
ROM1-201ENST00000278833 YEATS4O95619 227 aa29.27■■■□□ 2.28
ROM1-201ENST00000278833 APBA3O96018 575 aa29.27■■■□□ 2.28
ROM1-201ENST00000278833 ZNF75DP51815 510 aa29.27■■■□□ 2.28
ROM1-201ENST00000278833 SF3B2Q13435 895 aaKnown RBP29.27■■■□□ 2.28
ROM1-201ENST00000278833 MYRIPQ8NFW9 859 aa29.27■■■□□ 2.28
ROM1-201ENST00000278833 IRS4O14654 1257 aaPredicted RBP29.27■■■□□ 2.28
ROM1-201ENST00000278833 RALYLQ86SE5 291 aaKnown RBP29.27■■■□□ 2.28
ROM1-201ENST00000278833 SLC4A9Q96Q91 983 aa29.27■■■□□ 2.28
ROM1-201ENST00000278833 GOLPH3LQ9H4A5 285 aa29.27■■■□□ 2.28
ROM1-201ENST00000278833 PDE8BO95263 885 aa29.26■■■□□ 2.27
ROM1-201ENST00000278833 GTF2F1P35269 517 aaKnown RBP eCLIP29.26■■■□□ 2.27
ROM1-201ENST00000278833 IQCB1Q15051 598 aa29.26■■■□□ 2.27
ROM1-201ENST00000278833 PDCL3Q9H2J4 239 aa29.26■■■□□ 2.27
ROM1-201ENST00000278833 POLR3EQ9NVU0 708 aa29.26■■■□□ 2.27
ROM1-201ENST00000278833 MYO5AQ9Y4I1 1855 aaKnown RBP29.26■■■□□ 2.27
ROM1-201ENST00000278833 ALX1Q15699 326 aa29.25■■■□□ 2.27
ROM1-201ENST00000278833 FBXO18Q8NFZ0 1043 aa29.25■■■□□ 2.27
ROM1-201ENST00000278833 ZNF330Q9Y3S2 320 aaPredicted RBP29.25■■■□□ 2.27
ROM1-201ENST00000278833 KLF18A0A0U1RQI7 1052 aa29.25■■■□□ 2.27
ROM1-201ENST00000278833 PLCB2Q00722 1185 aa29.25■■■□□ 2.27
ROM1-201ENST00000278833 ADALQ6DHV7 355 aa29.25■■■□□ 2.27
ROM1-201ENST00000278833 CHST3Q7LGC8 479 aa29.25■■■□□ 2.27
ROM1-201ENST00000278833 ZNF34Q8IZ26 560 aa29.25■■■□□ 2.27
ROM1-201ENST00000278833 MROH5Q6ZUA9 1318 aa29.24■■■□□ 2.27
ROM1-201ENST00000278833 ECM29Q5VYK3 1845 aa29.24■■■□□ 2.27
ROM1-201ENST00000278833 GOLGA8BA8MQT2 603 aa29.24■■■□□ 2.27
ROM1-201ENST00000278833 FGFR2P21802 821 aa29.24■■■□□ 2.27
ROM1-201ENST00000278833 DNAJC25Q9H1X3 360 aa29.24■■■□□ 2.27
ROM1-201ENST00000278833 CNNM1Q9NRU3 951 aa29.24■■■□□ 2.27
ROM1-201ENST00000278833 BTAF1O14981 1849 aa29.24■■■□□ 2.27
ROM1-201ENST00000278833 KINO60870 393 aaKnown RBP29.23■■■□□ 2.27
ROM1-201ENST00000278833 MTERF4Q7Z6M4 381 aaKnown RBP29.23■■■□□ 2.27
ROM1-201ENST00000278833 DEFB132Q7Z7B7 95 aa29.23■■■□□ 2.27
ROM1-201ENST00000278833 KCNG4Q8TDN1 519 aa29.23■■■□□ 2.27
ROM1-201ENST00000278833 C8orf76Q96K31 380 aa29.23■■■□□ 2.27
ROM1-201ENST00000278833 NBPF3Q9H094 633 aa29.23■■■□□ 2.27
ROM1-201ENST00000278833 ZBTB1Q9Y2K1 713 aa29.23■■■□□ 2.27
ROM1-201ENST00000278833 CHD4Q14839 1912 aa29.23■■■□□ 2.27
ROM1-201ENST00000278833 HAND2P61296 217 aa29.23■■■□□ 2.27
ROM1-201ENST00000278833 MRPS27Q92552 414 aaKnown RBP29.23■■■□□ 2.27
ROM1-201ENST00000278833 PI16Q6UXB8 463 aa29.22■■■□□ 2.27
ROM1-201ENST00000278833 LINC00301Q8NCQ3 95 aa29.22■■■□□ 2.27
ROM1-201ENST00000278833 FTOQ9C0B1 505 aaKnown RBP eCLIP29.22■■■□□ 2.27
ROM1-201ENST00000278833 RTL9Q8NET4 1388 aa29.21■■■□□ 2.27
ROM1-201ENST00000278833 TCRBV5S4A2TA0A5A2 114 aa29.21■■■□□ 2.27
ROM1-201ENST00000278833 PUM3Q15397 648 aaKnown RBP29.21■■■□□ 2.27
ROM1-201ENST00000278833 FMR1NBQ8N0W7 255 aaPredicted RBP29.21■■■□□ 2.27
ROM1-201ENST00000278833 FSIP1Q8NA03 581 aa29.21■■■□□ 2.27
ROM1-201ENST00000278833 LPIN2Q92539 896 aa29.21■■■□□ 2.27
ROM1-201ENST00000278833 CCDC85AQ96PX6 553 aaPredicted RBP29.21■■■□□ 2.27
ROM1-201ENST00000278833 GPHNQ9NQX3 736 aaPredicted RBP29.21■■■□□ 2.27
ROM1-201ENST00000278833 ANO10Q9NW15 660 aa29.21■■■□□ 2.27
ROM1-201ENST00000278833 PYCARDQ9ULZ3 195 aa29.21■■■□□ 2.27
ROM1-201ENST00000278833 NID2Q14112 1375 aa29.21■■■□□ 2.27
ROM1-201ENST00000278833 GPTP24298 496 aa29.21■■■□□ 2.27
ROM1-201ENST00000278833 SYNE4Q8N205 404 aa29.21■■■□□ 2.27
ROM1-201ENST00000278833 MRFAP1L1Q96HT8 127 aa29.21■■■□□ 2.27
ROM1-201ENST00000278833 PIH1D3Q9NQM4 214 aaKnown RBP29.21■■■□□ 2.27
ROM1-201ENST00000278833 ORC3Q9UBD5 711 aaPredicted RBP29.21■■■□□ 2.27
ROM1-201ENST00000278833 TRMT112Q9UI30 125 aaKnown RBP29.21■■■□□ 2.27
ROM1-201ENST00000278833 NAP1L2Q9ULW6 460 aaPredicted RBP29.21■■■□□ 2.27
ROM1-201ENST00000278833 ANGEL1Q9UNK9 670 aaKnown RBP29.21■■■□□ 2.27
ROM1-201ENST00000278833 EN1Q05925 392 aaPredicted RBP29.2■■■□□ 2.26
ROM1-201ENST00000278833 TRDNQ13061 729 aa29.2■■■□□ 2.26
ROM1-201ENST00000278833 PCDHA7Q9UN72 937 aa29.2■■■□□ 2.26
ROM1-201ENST00000278833 TBC1D2BQ9UPU7 963 aa29.2■■■□□ 2.26
ROM1-201ENST00000278833 UBN2Q6ZU65 1347 aa29.2■■■□□ 2.26
ROM1-201ENST00000278833 SH2B2O14492 632 aaPredicted RBP29.19■■■□□ 2.26
ROM1-201ENST00000278833 BAG6P46379 1132 aa29.19■■■□□ 2.26
ROM1-201ENST00000278833 CCDC102BQ68D86 513 aa29.19■■■□□ 2.26
ROM1-201ENST00000278833 TMEM87BQ96K49 555 aa29.19■■■□□ 2.26
ROM1-201ENST00000278833 CDKL5O76039 1030 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms