RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 TPCN1Q9ULQ1 816 aa19.5■□□□□ 0.71
SLC1A4-201ENST00000234256 SHTN1A0MZ66 631 aa19.5■□□□□ 0.71
SLC1A4-201ENST00000234256 PROSER3Q2NL68 480 aa19.5■□□□□ 0.71
SLC1A4-201ENST00000234256 CTNNBL1Q8WYA6 563 aaPredicted RBP19.5■□□□□ 0.71
SLC1A4-201ENST00000234256 STAMQ92783 540 aa19.5■□□□□ 0.71
SLC1A4-201ENST00000234256 RMND1Q9NWS8 449 aa19.5■□□□□ 0.71
SLC1A4-201ENST00000234256 AOX1Q06278 1338 aa19.5■□□□□ 0.71
SLC1A4-201ENST00000234256 DYDC1Q8WWB3 177 aa19.49■□□□□ 0.71
SLC1A4-201ENST00000234256 FEZ1Q99689 392 aa19.49■□□□□ 0.71
SLC1A4-201ENST00000234256 WWC3Q9ULE0 1092 aa19.49■□□□□ 0.71
SLC1A4-201ENST00000234256 GSTTP1A0A1W2PQM5 241 aa19.49■□□□□ 0.71
SLC1A4-201ENST00000234256 NEURL1BA8MQ27 555 aa19.49■□□□□ 0.71
SLC1A4-201ENST00000234256 ZNF569Q5MCW4 686 aa19.49■□□□□ 0.71
SLC1A4-201ENST00000234256 CTAGE1Q96RT6 745 aa19.49■□□□□ 0.71
SLC1A4-201ENST00000234256 CALCOCO1Q9P1Z2 691 aa19.49■□□□□ 0.71
SLC1A4-201ENST00000234256 SAMM50Q9Y512 469 aa19.49■□□□□ 0.71
SLC1A4-201ENST00000234256 V9GY48 417 aaPredicted RBP19.49■□□□□ 0.71
SLC1A4-201ENST00000234256 CAPZA3Q96KX2 299 aa19.49■□□□□ 0.71
SLC1A4-201ENST00000234256 PYM1Q9BRP8 204 aaKnown RBP19.49■□□□□ 0.71
SLC1A4-201ENST00000234256 ANTXR1Q9H6X2 564 aa19.49■□□□□ 0.71
SLC1A4-201ENST00000234256 BTG4Q9NY30 223 aa19.49■□□□□ 0.71
SLC1A4-201ENST00000234256 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.49■□□□□ 0.71
SLC1A4-201ENST00000234256 POLR2DO15514 142 aaKnown RBP19.48■□□□□ 0.71
SLC1A4-201ENST00000234256 RHOXF2BP0C7M4 288 aa19.48■□□□□ 0.71
SLC1A4-201ENST00000234256 RHOXF2Q9BQY4 288 aa19.48■□□□□ 0.71
SLC1A4-201ENST00000234256 KCNH3Q9ULD8 1083 aa19.48■□□□□ 0.71
SLC1A4-201ENST00000234256 MTMR6Q9Y217 621 aa19.48■□□□□ 0.71
SLC1A4-201ENST00000234256 ATP10AO60312 1499 aa19.48■□□□□ 0.71
SLC1A4-201ENST00000234256 TNNI2P48788 182 aa19.48■□□□□ 0.71
SLC1A4-201ENST00000234256 BEND3Q5T5X7 828 aa19.48■□□□□ 0.71
SLC1A4-201ENST00000234256 ZNF202O95125 648 aa19.48■□□□□ 0.71
SLC1A4-201ENST00000234256 CYLC1P35663 651 aaPredicted RBP19.48■□□□□ 0.71
SLC1A4-201ENST00000234256 FAM114A1Q8IWE2 563 aa19.48■□□□□ 0.71
SLC1A4-201ENST00000234256 ZNF75DP51815 510 aa19.47■□□□□ 0.71
SLC1A4-201ENST00000234256 TTC6Q86TZ1 520 aa19.47■□□□□ 0.71
SLC1A4-201ENST00000234256 UGGT1Q9NYU2 1555 aa19.47■□□□□ 0.71
SLC1A4-201ENST00000234256 MYO5CQ9NQX4 1742 aa19.47■□□□□ 0.71
SLC1A4-201ENST00000234256 GNAQP50148 359 aa19.47■□□□□ 0.71
SLC1A4-201ENST00000234256 UBXN1Q04323 297 aa19.47■□□□□ 0.71
SLC1A4-201ENST00000234256 LRMPQ12912 555 aa19.47■□□□□ 0.71
SLC1A4-201ENST00000234256 SF3B2Q13435 895 aaKnown RBP19.47■□□□□ 0.71
SLC1A4-201ENST00000234256 VPS16Q9H269 839 aa19.47■□□□□ 0.71
SLC1A4-201ENST00000234256 KRT2P35908 639 aa19.47■□□□□ 0.71
SLC1A4-201ENST00000234256 TNIP1Q15025 636 aa19.47■□□□□ 0.71
SLC1A4-201ENST00000234256 WDR78Q5VTH9 848 aa19.47■□□□□ 0.71
SLC1A4-201ENST00000234256 GPIHBP1Q8IV16 184 aa19.47■□□□□ 0.71
SLC1A4-201ENST00000234256 SYCP3Q8IZU3 236 aa19.47■□□□□ 0.71
SLC1A4-201ENST00000234256 PAF1Q8N7H5 531 aa19.47■□□□□ 0.71
SLC1A4-201ENST00000234256 IQUBQ8NA54 791 aa19.47■□□□□ 0.71
SLC1A4-201ENST00000234256 KCNJ14Q9UNX9 436 aa19.47■□□□□ 0.71
SLC1A4-201ENST00000234256 SH3TC1Q8TE82 1336 aa19.46■□□□□ 0.71
SLC1A4-201ENST00000234256 HLA-DOAP06340 250 aa19.46■□□□□ 0.71
SLC1A4-201ENST00000234256 RNF187Q5TA31 235 aaPredicted RBP19.46■□□□□ 0.71
SLC1A4-201ENST00000234256 TTLL7Q6ZT98 887 aa19.46■□□□□ 0.71
SLC1A4-201ENST00000234256 MAATS1Q7Z4T9 603 aa19.46■□□□□ 0.71
SLC1A4-201ENST00000234256 TM6SF1Q9BZW5 370 aa19.46■□□□□ 0.71
SLC1A4-201ENST00000234256 NR1I2O75469 434 aa19.46■□□□□ 0.71
SLC1A4-201ENST00000234256 MCM3P25205 808 aa19.46■□□□□ 0.71
SLC1A4-201ENST00000234256 GTF3C6Q969F1 213 aa19.46■□□□□ 0.71
SLC1A4-201ENST00000234256 USP28Q96RU2 1077 aa19.46■□□□□ 0.71
SLC1A4-201ENST00000234256 E7EWF7 191 aa19.46■□□□□ 0.71
SLC1A4-201ENST00000234256 ATP5JP18859 108 aa19.46■□□□□ 0.71
SLC1A4-201ENST00000234256 ELP1O95163 1332 aa19.46■□□□□ 0.71
SLC1A4-201ENST00000234256 GNAT2P19087 354 aa19.46■□□□□ 0.71
SLC1A4-201ENST00000234256 CTDSPL2Q05D32 466 aa19.46■□□□□ 0.71
SLC1A4-201ENST00000234256 KRT40Q6A162 431 aa19.46■□□□□ 0.71
SLC1A4-201ENST00000234256 CCDC42Q96M95 316 aa19.45■□□□□ 0.7
SLC1A4-201ENST00000234256 BAG1Q99933 345 aaPredicted RBP19.45■□□□□ 0.7
SLC1A4-201ENST00000234256 ERCC3P19447 782 aa19.45■□□□□ 0.7
SLC1A4-201ENST00000234256 FANCCQ00597 558 aa19.45■□□□□ 0.7
SLC1A4-201ENST00000234256 SAMD9LQ8IVG5 1584 aa19.45■□□□□ 0.7
SLC1A4-201ENST00000234256 PRAMEF22A3QJZ6 481 aa19.45■□□□□ 0.7
SLC1A4-201ENST00000234256 CALML3P27482 149 aa19.45■□□□□ 0.7
SLC1A4-201ENST00000234256 TPTE2Q6XPS3 522 aa19.45■□□□□ 0.7
SLC1A4-201ENST00000234256 DTHD1Q6ZMT9 781 aa19.45■□□□□ 0.7
SLC1A4-201ENST00000234256 UBE2Q2Q8WVN8 375 aa19.45■□□□□ 0.7
SLC1A4-201ENST00000234256 LLPHQ9BRT6 129 aaKnown RBP19.45■□□□□ 0.7
SLC1A4-201ENST00000234256 CTAGE9A4FU28 777 aa19.44■□□□□ 0.7
SLC1A4-201ENST00000234256 WWC2Q6AWC2 1192 aa19.44■□□□□ 0.7
SLC1A4-201ENST00000234256 POTEB2H3BUK9 544 aa19.44■□□□□ 0.7
SLC1A4-201ENST00000234256 ADD1P35611 737 aaKnown RBP19.44■□□□□ 0.7
SLC1A4-201ENST00000234256 NAA15Q9BXJ9 866 aaKnown RBP19.44■□□□□ 0.7
SLC1A4-201ENST00000234256 TLR7Q9NYK1 1049 aaKnown RBP19.44■□□□□ 0.7
SLC1A4-201ENST00000234256 LETM2Q2VYF4 491 aa19.44■□□□□ 0.7
SLC1A4-201ENST00000234256 RILPL1Q5EBL4 403 aa19.44■□□□□ 0.7
SLC1A4-201ENST00000234256 CMTR1Q8N1G2 835 aaKnown RBP19.44■□□□□ 0.7
SLC1A4-201ENST00000234256 LUC7L2Q9Y383 392 aaKnown RBP19.44■□□□□ 0.7
SLC1A4-201ENST00000234256 PCDH11XQ9BZA7 1347 aa19.43■□□□□ 0.7
SLC1A4-201ENST00000234256 PCDH11YQ9BZA8 1340 aa19.43■□□□□ 0.7
SLC1A4-201ENST00000234256 KIF5AQ12840 1032 aa19.43■□□□□ 0.7
SLC1A4-201ENST00000234256 ATL3Q6DD88 541 aa19.43■□□□□ 0.7
SLC1A4-201ENST00000234256 TRMT44Q8IYL2 757 aaKnown RBP19.43■□□□□ 0.7
SLC1A4-201ENST00000234256 NFE2L3Q9Y4A8 694 aa19.43■□□□□ 0.7
SLC1A4-201ENST00000234256 IBTKQ9P2D0 1353 aaPredicted RBP19.43■□□□□ 0.7
SLC1A4-201ENST00000234256 CCDC94Q9BW85 323 aaPredicted RBP19.43■□□□□ 0.7
SLC1A4-201ENST00000234256 KDM5CP41229 1560 aa19.43■□□□□ 0.7
SLC1A4-201ENST00000234256 PLA2R1Q13018 1463 aa19.43■□□□□ 0.7
SLC1A4-201ENST00000234256 METP08581 1390 aa19.43■□□□□ 0.7
SLC1A4-201ENST00000234256 GOLGA6L7A0A1B0GV03 622 aa19.43■□□□□ 0.7
SLC1A4-201ENST00000234256 C8orf37Q96NL8 207 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms