RNA–Protein interactions for RNA: ENSMUST00000197488.4

Csde1-206, Transcript of Cold shock domain-containing protein E1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Csde1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Csde1-206ENSMUST00000197488 Zkscan8Q8BSL0 588 aa7.48□□□□□ -1.21
Csde1-206ENSMUST00000197488 Farp2Q91VS8 1065 aa7.48□□□□□ -1.21
Csde1-206ENSMUST00000197488 Gtpbp4Q99ME9 634 aaKnown RBP7.48□□□□□ -1.21
Csde1-206ENSMUST00000197488 Polr2dQ9D7M8 142 aaKnown RBP7.48□□□□□ -1.21
Csde1-206ENSMUST00000197488 Mrvi1Q9WUX5 899 aaKnown RBP7.48□□□□□ -1.21
Csde1-206ENSMUST00000197488 Abcc12Q80WJ6 1366 aa7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 Gm10134F6ZQC6 126 aa7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 Gm5624F6ZZG8 207 aa7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 Llgl2Q3TJ91 1027 aa7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 Tmem109Q3UBX0 243 aa7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 Tmem59lQ7TNI2 337 aa7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 4930572O03RikQ8C5Y0 211 aa7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 Epc1Q8C9X6 813 aa7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 Nek9Q8K1R7 984 aa7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 Trim59Q922Y2 403 aa7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 Ccdc47Q9D024 483 aaKnown RBP7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 Wdr64Q9D565 1086 aa7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 ChmQ9QXG2 665 aa7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 Kcnh3Q9WVJ0 1095 aa7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 PplQ9R269 1755 aa7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 Ahnak2E9PYB0 1738 aaKnown RBP7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 Ubr1O70481 1757 aa7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 Gm43638A0A0J9YU36 694 aa7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 Slc4a1P04919 929 aa7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 Evc2Q8K1G2 1220 aa7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 Kri1Q8VDQ9 704 aaKnown RBP7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 Vnn1Q9Z0K8 512 aa7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 Med1Q925J9 1575 aa7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 Tnrc6bQ8BKI2 1810 aaKnown RBP7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 Grin1P35438 938 aa7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 Dpf2Q61103 391 aaKnown RBP7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 Ctdp1Q7TSG2 960 aa7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 Ppp2r2cQ8BG02 447 aa7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 Q8CEZ4 452 aa7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 Eif3bQ8JZQ9 803 aaKnown RBP7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 Rdm1Q9CQK3 281 aa7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 Myo5bP21271 1818 aa7.47□□□□□ -1.21
Csde1-206ENSMUST00000197488 AW822073A0A0N4SUK1 652 aa7.46□□□□□ -1.21
Csde1-206ENSMUST00000197488 Cyp2j7A0A140T8U1 504 aa7.46□□□□□ -1.21
Csde1-206ENSMUST00000197488 A0A1L1SQF0 893 aa7.46□□□□□ -1.21
Csde1-206ENSMUST00000197488 Pde4bB1AWC9 736 aa7.46□□□□□ -1.21
Csde1-206ENSMUST00000197488 Rsph10bE9PYQ0 876 aa7.46□□□□□ -1.21
Csde1-206ENSMUST00000197488 Lrrc6O88978 473 aa7.46□□□□□ -1.21
Csde1-206ENSMUST00000197488 Nlrp1aQ2LKU9 1182 aa7.46□□□□□ -1.21
Csde1-206ENSMUST00000197488 Ncoa4Q5U4H9 625 aa7.46□□□□□ -1.21
Csde1-206ENSMUST00000197488 Secisbp2lQ6A098 1086 aaKnown RBP7.46□□□□□ -1.21
Csde1-206ENSMUST00000197488 Abcf1Q6P542 837 aaKnown RBP7.46□□□□□ -1.21
Csde1-206ENSMUST00000197488 GphnQ8BUV3 769 aaKnown RBP7.46□□□□□ -1.21
Csde1-206ENSMUST00000197488 Tmem266Q8BZB3 538 aa7.46□□□□□ -1.21
Csde1-206ENSMUST00000197488 Fam193aQ8CGI1 1231 aaKnown RBP7.46□□□□□ -1.21
Csde1-206ENSMUST00000197488 MicalclQ9D5U9 680 aa7.46□□□□□ -1.21
Csde1-206ENSMUST00000197488 Tfcp2Q9ERA0 502 aa7.46□□□□□ -1.21
Csde1-206ENSMUST00000197488 Zcchc17Q9ESX4 241 aaKnown RBP7.46□□□□□ -1.21
Csde1-206ENSMUST00000197488 Gm20425E9Q035 978 aaKnown RBP7.46□□□□□ -1.22
Csde1-206ENSMUST00000197488 Ms4a1P19437 291 aa7.46□□□□□ -1.22
Csde1-206ENSMUST00000197488 NapbP28663 298 aa7.46□□□□□ -1.22
Csde1-206ENSMUST00000197488 Kif2aP28740 705 aa7.46□□□□□ -1.22
Csde1-206ENSMUST00000197488 SrprbP47758 269 aa7.46□□□□□ -1.22
Csde1-206ENSMUST00000197488 C87499Q3UX49 493 aa7.46□□□□□ -1.22
Csde1-206ENSMUST00000197488 Gdap1l1Q8VE33 370 aa7.46□□□□□ -1.22
Csde1-206ENSMUST00000197488 BaatQ91X34 420 aa7.46□□□□□ -1.22
Csde1-206ENSMUST00000197488 Yeats4Q9CR11 227 aaKnown RBP7.46□□□□□ -1.22
Csde1-206ENSMUST00000197488 Ankrd1Q9CR42 319 aa7.46□□□□□ -1.22
Csde1-206ENSMUST00000197488 Fam213aQ9CYH2 218 aa7.46□□□□□ -1.22
Csde1-206ENSMUST00000197488 Ltb4r2Q9JJL9 360 aa7.46□□□□□ -1.22
Csde1-206ENSMUST00000197488 Pik3c2aQ61194 1686 aa7.46□□□□□ -1.22
Csde1-206ENSMUST00000197488 Cdc27A2A6Q5 825 aa7.46□□□□□ -1.22
Csde1-206ENSMUST00000197488 Gm21969J3QJZ1 289 aa7.46□□□□□ -1.22
Csde1-206ENSMUST00000197488 Sun3Q5SS91 320 aa7.46□□□□□ -1.22
Csde1-206ENSMUST00000197488 Cdc37Q61081 379 aa7.46□□□□□ -1.22
Csde1-206ENSMUST00000197488 Ncoa7Q6DFV7 943 aa7.46□□□□□ -1.22
Csde1-206ENSMUST00000197488 Pcdhb14Q6PB90 796 aa7.46□□□□□ -1.22
Csde1-206ENSMUST00000197488 Luc7l2Q7TNC4 392 aaKnown RBP7.46□□□□□ -1.22
Csde1-206ENSMUST00000197488 Efcc1Q9JJF6 558 aa7.46□□□□□ -1.22
Csde1-206ENSMUST00000197488 Txnrd1Q9JMH6 613 aa7.46□□□□□ -1.22
Csde1-206ENSMUST00000197488 Atp1a4Q9WV27 1032 aa7.46□□□□□ -1.22
Csde1-206ENSMUST00000197488 Asap2Q7SIG6 958 aa7.45□□□□□ -1.22
Csde1-206ENSMUST00000197488 Ints4Q8CIM8 964 aa7.45□□□□□ -1.22
Csde1-206ENSMUST00000197488 Ccdc39Q9D5Y1 937 aa7.45□□□□□ -1.22
Csde1-206ENSMUST00000197488 Ercc4Q9QZD4 917 aa7.45□□□□□ -1.22
Csde1-206ENSMUST00000197488 Col15a1O35206 1367 aa7.45□□□□□ -1.22
Csde1-206ENSMUST00000197488 Zc3h13E9Q784 1729 aaKnown RBP7.45□□□□□ -1.22
Csde1-206ENSMUST00000197488 Tbc1d2B1AVH7 922 aa7.45□□□□□ -1.22
Csde1-206ENSMUST00000197488 TbcaP48428 108 aaKnown RBP7.45□□□□□ -1.22
Csde1-206ENSMUST00000197488 Specc1lQ2KN98 1118 aaKnown RBP7.45□□□□□ -1.22
Csde1-206ENSMUST00000197488 Usp13Q5BKP2 858 aa7.45□□□□□ -1.22
Csde1-206ENSMUST00000197488 Haus7Q8BKT8 364 aa7.45□□□□□ -1.22
Csde1-206ENSMUST00000197488 Ccdc150Q8CDI7 1110 aa7.45□□□□□ -1.22
Csde1-206ENSMUST00000197488 Trim11Q99PQ2 467 aa7.45□□□□□ -1.22
Csde1-206ENSMUST00000197488 Appbp2Q9DAX9 585 aa7.45□□□□□ -1.22
Csde1-206ENSMUST00000197488 PdclQ9DBX2 301 aa7.45□□□□□ -1.22
Csde1-206ENSMUST00000197488 Pdcd6ipQ9WU78 869 aaKnown RBP7.45□□□□□ -1.22
Csde1-206ENSMUST00000197488 Suclg2Q9Z2I8 433 aa7.45□□□□□ -1.22
Csde1-206ENSMUST00000197488 Map2P20357 1828 aa7.45□□□□□ -1.22
Csde1-206ENSMUST00000197488 Zfp597E9Q6S0 419 aa7.45□□□□□ -1.22
Csde1-206ENSMUST00000197488 TsksO54887 585 aa7.45□□□□□ -1.22
Csde1-206ENSMUST00000197488 Myl3P09542 204 aa7.45□□□□□ -1.22
Csde1-206ENSMUST00000197488 Evi5P97366 809 aa7.45□□□□□ -1.22
Csde1-206ENSMUST00000197488 Cdkl5Q3UTQ8 938 aa7.45□□□□□ -1.22
Csde1-206ENSMUST00000197488 Atf3Q60765 181 aa7.45□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms