RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Hap1O35668 628 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Nat3P50296 290 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Miga2Q8BK03 593 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Coro7Q9D2V7 922 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Gadd45bP22339 160 aa8.16□□□□□ -1.1
Chm-202ENSMUST00000113388 Slc30a9Q5IRJ6 567 aa8.16□□□□□ -1.1
Chm-202ENSMUST00000113388 Rad17Q6NXW6 688 aa8.16□□□□□ -1.1
Chm-202ENSMUST00000113388 Kif2cQ922S8 721 aa8.16□□□□□ -1.1
Chm-202ENSMUST00000113388 Cap2Q9CYT6 476 aa8.16□□□□□ -1.1
Chm-202ENSMUST00000113388 Scn7aB1AYL1 1681 aa8.16□□□□□ -1.1
Chm-202ENSMUST00000113388 Odf2A3KGV1 830 aaKnown RBP8.16□□□□□ -1.1
Chm-202ENSMUST00000113388 Ppfia4B8QI36 1187 aa8.16□□□□□ -1.1
Chm-202ENSMUST00000113388 Gm6588E9Q3K0 461 aa8.16□□□□□ -1.1
Chm-202ENSMUST00000113388 Dync1i2O88487 612 aaKnown RBP8.16□□□□□ -1.1
Chm-202ENSMUST00000113388 Vps33bP59016 617 aa8.16□□□□□ -1.1
Chm-202ENSMUST00000113388 Ogfod1Q3U0K8 545 aa8.16□□□□□ -1.1
Chm-202ENSMUST00000113388 Kif11Q6P9P6 1052 aa8.16□□□□□ -1.1
Chm-202ENSMUST00000113388 Znf330Q922H9 316 aa8.16□□□□□ -1.1
Chm-202ENSMUST00000113388 SyncQ9EPM5 470 aa8.16□□□□□ -1.1
Chm-202ENSMUST00000113388 Gm11983V9GXS8 105 aa8.16□□□□□ -1.1
Chm-202ENSMUST00000113388 Mfsd4b4J3QNS5 503 aa8.16□□□□□ -1.1
Chm-202ENSMUST00000113388 Myo1bP46735 1107 aa8.16□□□□□ -1.1
Chm-202ENSMUST00000113388 Abcd1P48410 736 aa8.16□□□□□ -1.1
Chm-202ENSMUST00000113388 Usp25P57080 1055 aa8.16□□□□□ -1.1
Chm-202ENSMUST00000113388 Satb1Q60611 764 aa8.16□□□□□ -1.1
Chm-202ENSMUST00000113388 Znf532Q6NXK2 1036 aa8.16□□□□□ -1.1
Chm-202ENSMUST00000113388 Ssh3Q8K330 649 aa8.16□□□□□ -1.1
Chm-202ENSMUST00000113388 KinQ8K339 391 aa8.16□□□□□ -1.1
Chm-202ENSMUST00000113388 Kif18aQ91WD7 886 aa8.16□□□□□ -1.1
Chm-202ENSMUST00000113388 Gbp2Q9Z0E6 589 aa8.16□□□□□ -1.1
Chm-202ENSMUST00000113388 Mctp1E9PV86 951 aa8.15□□□□□ -1.1
Chm-202ENSMUST00000113388 Vars2Q3U2A8 1060 aa8.15□□□□□ -1.1
Chm-202ENSMUST00000113388 Babam1Q3UI43 333 aa8.15□□□□□ -1.1
Chm-202ENSMUST00000113388 Swap70Q6A028 585 aaKnown RBP8.15□□□□□ -1.1
Chm-202ENSMUST00000113388 Ints5Q8CHT3 1018 aa8.15□□□□□ -1.1
Chm-202ENSMUST00000113388 ChmQ9QXG2 665 aa8.15□□□□□ -1.1
Chm-202ENSMUST00000113388 Nwd2Q6P5U7 1742 aa8.15□□□□□ -1.1
Chm-202ENSMUST00000113388 Ccdc171E9Q1U1 1324 aa8.15□□□□□ -1.1
Chm-202ENSMUST00000113388 Cacna2d1O08532 1103 aa8.15□□□□□ -1.1
Chm-202ENSMUST00000113388 Nfatc2ipO09130 412 aa8.15□□□□□ -1.1
Chm-202ENSMUST00000113388 Cpa2Q504N0 417 aa8.15□□□□□ -1.1
Chm-202ENSMUST00000113388 PsdQ5DTT2 1024 aa8.15□□□□□ -1.1
Chm-202ENSMUST00000113388 Btbd11Q6GQW0 1109 aa8.15□□□□□ -1.1
Chm-202ENSMUST00000113388 Hook1Q8BIL5 728 aa8.15□□□□□ -1.1
Chm-202ENSMUST00000113388 HnrnpuQ8VEK3 800 aaKnown RBP8.15□□□□□ -1.1
Chm-202ENSMUST00000113388 Taf7lQ9D3R9 471 aa8.15□□□□□ -1.1
Chm-202ENSMUST00000113388 Fer1l6E0CZ42 1862 aa8.15□□□□□ -1.1
Chm-202ENSMUST00000113388 Atp8b1Q148W0 1251 aa8.15□□□□□ -1.1
Chm-202ENSMUST00000113388 Mybpc2Q5XKE0 1136 aa8.15□□□□□ -1.1
Chm-202ENSMUST00000113388 Ccdc66Q6NS45 935 aa8.15□□□□□ -1.1
Chm-202ENSMUST00000113388 Trim6Q8BGE7 488 aa8.15□□□□□ -1.1
Chm-202ENSMUST00000113388 Ccdc159Q8C963 411 aa8.15□□□□□ -1.1
Chm-202ENSMUST00000113388 Vps53Q8CCB4 832 aa8.15□□□□□ -1.1
Chm-202ENSMUST00000113388 P3h4Q8K2B0 443 aa8.15□□□□□ -1.1
Chm-202ENSMUST00000113388 Scnn1bQ9WU38 638 aa8.15□□□□□ -1.1
Chm-202ENSMUST00000113388 Tnip1Q9WUU8 647 aa8.15□□□□□ -1.1
Chm-202ENSMUST00000113388 Hdac6Q9Z2V5 1149 aa8.15□□□□□ -1.1
Chm-202ENSMUST00000113388 Psmc4P54775 418 aa8.15□□□□□ -1.11
Chm-202ENSMUST00000113388 Snx13Q6PHS6 957 aa8.15□□□□□ -1.11
Chm-202ENSMUST00000113388 Ddx27Q921N6 760 aaKnown RBP8.15□□□□□ -1.11
Chm-202ENSMUST00000113388 Wdr46Q9Z0H1 622 aaKnown RBP8.15□□□□□ -1.11
Chm-202ENSMUST00000113388 NpcdF8VQB8 469 aa8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 Fkbp4P30416 458 aa8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 Hnrnph2P70333 449 aaKnown RBP8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 NexnQ7TPW1 607 aa8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 Sdad1Q80UZ2 687 aaKnown RBP8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 Map3k11Q80XI6 850 aa8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 Tubb4aQ9D6F9 444 aa8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 Gucy1a3Q9ERL9 691 aa8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 Zranb2Q9R020 330 aaKnown RBP8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 Robo1O89026 1612 aa8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 Cnnm1Q0GA42 951 aa8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 Znf697Q569E7 569 aa8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 Iws1Q8C1D8 766 aa8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 CntrobQ8CB62 887 aa8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 Luzp1Q8R4U7 1068 aaKnown RBP8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 Efcab2Q9CQ46 164 aa8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 Tbc1d4Q8BYJ6 1307 aa8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 Tab3Q571K4 716 aa8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 Bicd1Q8BR07 835 aa8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 Nsfl1cQ9CZ44 370 aaKnown RBP8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 PigbQ9JJQ0 542 aa8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 Gm17615E9Q9P2 165 aa8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 Pde11aP0C1Q2 933 aa8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 Rps6ka3P18654 740 aaKnown RBP8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 Strn4P58404 760 aa8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 PolnQ7TQ07 864 aa8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 Stkld1Q80YS9 662 aa8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 Micall1Q8BGT6 870 aa8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 Spata32Q8C5V0 334 aa8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 Nup88Q8CEC0 753 aaKnown RBP8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 Taco1Q8K0Z7 294 aaKnown RBP8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 C1qtnf12Q8R2Z0 308 aa8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 Cul3Q9JLV5 768 aa8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 Sytl4Q9R0Q1 673 aa8.14□□□□□ -1.11
Chm-202ENSMUST00000113388 Mast2Q60592 1734 aa8.13□□□□□ -1.11
Chm-202ENSMUST00000113388 Map7d1A2AJI0 846 aa8.13□□□□□ -1.11
Chm-202ENSMUST00000113388 Cavin4A2AMM0 362 aa8.13□□□□□ -1.11
Chm-202ENSMUST00000113388 Eftud2O08810 971 aaKnown RBP8.13□□□□□ -1.11
Chm-202ENSMUST00000113388 GckP52792 465 aa8.13□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms