RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Cntnap1O54991 1385 aa8.33□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Lcmt1A0A0U1RNF2 332 aa8.33□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Snai1Q02085 264 aa8.33□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Pde3bQ61409 1100 aa8.33□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Ano10Q8BH79 659 aa8.33□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Slu7Q8BHJ9 585 aa8.33□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Slc39a11Q8BWY7 342 aa8.33□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Eva1cP58659 440 aa8.33□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Tmem109Q3UBX0 243 aa8.33□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Znf496Q5SXI5 585 aa8.33□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Nlrp9aQ66X03 949 aa8.33□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Atp1a3Q6PIC6 1013 aa8.33□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Prdm4Q80V63 803 aa8.33□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Nek11Q8C0Q4 628 aa8.33□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Phf20l1Q8CCJ9 1013 aa8.33□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Ciao1Q99KN2 339 aa8.33□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Snw1Q9CSN1 536 aaKnown RBP8.33□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Rps6ka4Q9Z2B9 773 aa8.33□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Ltbp1Q8CG19 1712 aa8.32□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Kat6bQ8BRB7 1872 aa8.32□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Irgm2A0A140LIF8 407 aa8.32□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Pde8bE9Q4S1 865 aa8.32□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Serpinb6bO08804 377 aa8.32□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Stx1aO35526 288 aa8.32□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Clec11aO88200 328 aa8.32□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Stat1P42225 749 aa8.32□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Pla2g4fQ50L41 855 aa8.32□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Zkscan4Q5SZT6 480 aa8.32□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Spty2d1Q68FG3 682 aa8.32□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Edrf1Q6GQV7 1239 aa8.32□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Tmem266Q8BZB3 538 aa8.32□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Tmem143Q8VD26 458 aa8.32□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Sipa1l3G3X9J0 1776 aa8.32□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Samsn1P57725 372 aa8.32□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Tpm1P58771 284 aa8.32□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Anks1aP59672 1150 aa8.32□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Hspd1P63038 573 aaKnown RBP8.32□□□□□ -1.08
Clrn1-202ENSMUST00000055636 IntuQ059U7 942 aa8.32□□□□□ -1.08
Clrn1-202ENSMUST00000055636 RubcnlQ3TD16 648 aa8.32□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Igsf3Q6ZQA6 1194 aa8.32□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Tmem67Q8BR76 992 aa8.32□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Fam53cQ8BXQ8 393 aa8.32□□□□□ -1.08
Clrn1-202ENSMUST00000055636 CrebrfQ8CDG5 640 aaKnown RBP8.32□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Cyp3a57D3YYZ0 503 aa8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Znf568E9PYI1 671 aa8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 XpcP51612 930 aa8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Vps33bP59016 617 aa8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Kmt5bQ3U8K7 883 aa8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Slc38a10Q5I012 1090 aa8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Znf532Q6NXK2 1036 aa8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Hook1Q8BIL5 728 aa8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Map10Q8BJS7 891 aa8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Spata32Q8C5V0 334 aa8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Ufl1Q8CCJ3 793 aaKnown RBP8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Frat2Q8K025 231 aa8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 AatfQ9JKX4 526 aaKnown RBP8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 PnnO35691 725 aaKnown RBP8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Cyp2d9P11714 504 aa8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Fkbp1aP26883 108 aaKnown RBP8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Rrp1P56183 494 aaKnown RBP8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Atp8a2P98200 1148 aa8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Rnf20Q5DTM8 973 aa8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Cypt2Q6P924 180 aa8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Ppp1r10Q80W00 888 aaKnown RBP8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 AidaQ8C4Q6 305 aa8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Iffo2Q8R2V2 512 aa8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Erc1Q99MI1 1120 aa8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Gja10Q9WUS4 505 aa8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Lgr5Q9Z1P4 907 aa8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Ankrd31A0A140LI88 1765 aa8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Zfp597E9Q6S0 419 aa8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Zbtb7aO88939 569 aaKnown RBP8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Snrpa1P57784 255 aaKnown RBP8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Cct2P80314 535 aaKnown RBP8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 R3hcc1Q8BSI6 488 aa8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Kiaa0319lQ8K135 1048 aa8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Plekho1Q9JIY0 408 aa8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 PhaxQ9JJT9 385 aaKnown RBP8.31□□□□□ -1.08
Clrn1-202ENSMUST00000055636 AW822073A0A0N4SUK1 652 aa8.3□□□□□ -1.08
Clrn1-202ENSMUST00000055636 H2afxP27661 143 aaKnown RBP8.3□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Sept1P42209 366 aa8.3□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Acap3Q6NXL5 833 aa8.3□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Fez2Q6TYB5 348 aa8.3□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Q8BZJ8 459 aa8.3□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Ccdc158Q8CDI6 1109 aa8.3□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Ints4Q8CIM8 964 aa8.3□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Ubxn4Q8VCH8 506 aa8.3□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Pcdhgc5Q91XW9 944 aa8.3□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Cyp2d34L7N463 504 aa8.3□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Celf1P28659 486 aaKnown RBP8.3□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Rtel1Q0VGM9 1203 aa8.3□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Shisa4Q8CA71 197 aa8.3□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Mtmr3Q8K296 1196 aa8.3□□□□□ -1.08
Clrn1-202ENSMUST00000055636 HmcesQ8R1M0 353 aaKnown RBP8.3□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Hnrnpul1Q8VDM6 859 aaKnown RBP8.3□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Ddx27Q921N6 760 aaKnown RBP8.3□□□□□ -1.08
Clrn1-202ENSMUST00000055636 Rdm1Q9CQK3 281 aa8.3□□□□□ -1.08
Clrn1-202ENSMUST00000055636 IcoslgQ9JHJ8 322 aa8.3□□□□□ -1.08
Clrn1-202ENSMUST00000055636 CoblQ5NBX1 1337 aaKnown RBP8.29□□□□□ -1.08
Clrn1-202ENSMUST00000055636 4931408C20RikE9PWP9 1381 aa8.29□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 40.1 ms