RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Nbr1P97432 988 aa18.59■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Naa16Q9DBB4 864 aa18.59■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Stxbp4Q9WV89 557 aa18.59■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Prr5lA2AVJ5 370 aa18.58■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Pde6aP27664 859 aa18.58■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Sik1Q60670 779 aa18.58■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Prpf4bQ61136 1007 aaKnown RBP18.58■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Sass6Q80UK7 654 aa18.58■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Fam13bQ8K2H3 851 aa18.58■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Efcc1Q9JJF6 558 aa18.58■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Krt24A1L317 512 aa18.58■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Pfkfb1P70266 471 aa18.58■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Trim34aQ99PP6 485 aa18.58■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Ifi35Q9D8C4 286 aa18.58■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Ube3bQ9ES34 1070 aa18.58■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Susd4Q8BH32 490 aa18.58■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Bola3Q8CEI1 110 aa18.58■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Gys2Q8VCB3 704 aa18.58■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Mei1Q9D4I2 1268 aa18.58■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Plekho1Q9JIY0 408 aa18.58■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Suclg2Q9Z2I8 433 aa18.58■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Mast3Q3U214 1321 aa18.57■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Card6E9PWH2 1175 aa18.57■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Zkscan4Q5SZT6 480 aa18.57■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Znf653Q6YND2 615 aa18.57■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Kcnq5Q9JK45 933 aa18.57■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Foxo4Q9WVH3 505 aa18.57■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Large1Q9Z1M7 756 aa18.57■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Dnajc25A2ALW5 357 aa18.57■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Cyp2c23E9Q5K4 494 aa18.57■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Lrrc8aQ80WG5 810 aa18.57■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Kcnj14Q8JZN3 434 aa18.57■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Pcdhb22Q91XZ8 794 aa18.57■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Rbm43Q99J64 343 aa18.57■□□□□ 0.56
Ckap4-201ENSMUST00000053871 CpvlQ9D3S9 478 aa18.57■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Mroh6V9GX81 722 aa18.57■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Bcl9lQ67FY2 1494 aa18.57■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Ces1hD3Z298 562 aa18.56■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Cyp3a59D3Z2W7 503 aa18.56■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Cplx2P84086 134 aa18.56■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Krt84Q99M73 603 aa18.56■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Casp1P29452 402 aa18.56■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Ifit1bl2Q3U687 466 aa18.56■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Tmem143Q8VD26 458 aa18.56■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Pold4Q9CWP8 107 aa18.56■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Tnrc6cQ3UHC0 1690 aaKnown RBP18.56■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Bicdl1A0JNT9 577 aa18.55■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Gm28047Q3US59 414 aa18.55■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Esco1Q69Z69 843 aa18.55■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Adam1bQ8R534 806 aa18.55■□□□□ 0.56
Ckap4-201ENSMUST00000053871 BccipQ9CWI3 316 aa18.55■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Xpo4Q9ESJ0 1151 aa18.55■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Mtx1P47802 317 aa18.55■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Pde4dQ01063 747 aa18.55■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Ap5z1Q3U829 807 aa18.55■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Slc4a4O88343 1079 aa18.55■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Cbx1P83917 185 aaKnown RBP18.55■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Ube2oQ6ZPJ3 1288 aa18.55■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Irx4Q9QY61 515 aa18.55■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Frat1P70339 274 aa18.54■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Kiaa0753Q6A000 959 aa18.54■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Ranbp6Q8BIV3 1105 aa18.54■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Speer4dL7N216 212 aa18.54■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Hap1O35668 628 aa18.54■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Slc38a10Q5I012 1090 aa18.54■□□□□ 0.56
Ckap4-201ENSMUST00000053871 TfrcQ62351 763 aaKnown RBP18.54■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Ccdc47Q9D024 483 aaKnown RBP18.54■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Cep120Q7TSG1 988 aa18.53■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Alx1Q8C8B0 326 aa18.53■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Nop2Q922K7 793 aaKnown RBP18.53■□□□□ 0.56
Ckap4-201ENSMUST00000053871 NgdnQ9DB96 315 aaKnown RBP18.53■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Pik3ap1Q9EQ32 811 aa18.53■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Ssc5dQ8BV57 1371 aa18.53■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Plbd2Q3TCN2 594 aa18.53■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Setdb1O88974 1307 aa18.53■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Akap11E9Q777 1895 aa18.53■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Nwd2Q6P5U7 1742 aa18.53■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Gm43638A0A0J9YU36 694 aa18.53■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Ccng2O08918 344 aa18.53■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Cdk4P30285 303 aa18.53■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Gtf2f1Q3THK3 508 aaKnown RBP18.53■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Bsdc1Q80Y55 427 aa18.53■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Prkag3Q8BGM7 489 aa18.53■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Yeats4Q9CR11 227 aaKnown RBP18.53■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Mapk8ip1Q9WVI9 707 aa18.53■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Sall1Q9ER74 1322 aa18.53■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Kcnh4A2A5F7 1018 aa18.52■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Snrpa1P57784 255 aaKnown RBP18.52■□□□□ 0.56
Ckap4-201ENSMUST00000053871 CtcfQ61164 736 aaKnown RBP18.52■□□□□ 0.56
Ckap4-201ENSMUST00000053871 Zeb2Q9R0G7 1215 aa18.52■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Abca3Q8R420 1704 aa18.52■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Epha2Q03145 977 aa18.51■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Glis3Q6XP49 780 aa18.51■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Cdkl5Q3UTQ8 938 aa18.51■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Otop3Q80UF9 577 aa18.51■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Gimap5Q8BWF2 308 aa18.51■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Atp12aQ9Z1W8 1035 aa18.51■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Nav1Q8CH77 1875 aa18.51■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Gm4340L7N2C4 268 aa18.51■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Cers3Q1A3B0 383 aa18.51■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 43.2 ms