RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 Plbd2Q3TCN2 594 aa15.46■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Ckap2Q3V1H1 664 aa15.46■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Ppp2r5bQ6PD28 497 aa15.46■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Bsdc1Q80Y55 427 aa15.46■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Kiaa0319lQ8K135 1048 aa15.46■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Paf1Q8K2T8 535 aa15.46■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Lrrfip2Q91WK0 415 aa15.46■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Ankrd1Q9CR42 319 aa15.46■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Il1rapl2Q9ERS6 686 aa15.46■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Ltb4r2Q9JJL9 360 aa15.46■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 1700113H08RikE9Q9Q5 327 aa15.45■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Ccng2O08918 344 aa15.45■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 TsksO54887 585 aa15.45■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Myd88P22366 296 aa15.45■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Cd22P35329 862 aa15.45■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Ano1Q8BHY3 960 aa15.45■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Slc39a6Q8C145 765 aa15.45■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Casp12O08736 419 aa15.45■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Ercc3P49135 783 aa15.45■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Adcy5P84309 1262 aa15.45■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Tceanc2Q8R2M0 207 aa15.45■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Utp3Q9JI13 469 aaKnown RBP15.45■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Myo3bQ1EG27 1305 aa15.44■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 1700122O11RikJ3QPW6 241 aa15.44■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Tyro3P55144 880 aa15.44■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 AidaQ8C4Q6 305 aa15.44■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Ccdc158Q8CDI6 1109 aa15.44■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Traf1P39428 409 aa15.44■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Hspd1P63038 573 aaKnown RBP15.44■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Cdkl5Q3UTQ8 938 aa15.44■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Stx1aO35526 288 aa15.43■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Lrriq3Q14DL3 633 aa15.43■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Lins1Q3U1D0 764 aa15.43■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Lamb1P02469 1786 aa15.43■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Hmx1O70218 332 aa15.43■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Me3Q8BMF3 604 aa15.43■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Nup98Q6PFD9 1816 aaKnown RBP15.43■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Prl3d1P18121 224 aa15.43■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Clca2Q8BG22 942 aa15.43■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Zfp317Q8C0Q5 607 aa15.43■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Tsr2Q8C8T8 191 aa15.43■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Col4a3bpQ9EQG9 624 aa15.43■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 MycbpQ9EQS3 103 aa15.43■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 AatfQ9JKX4 526 aaKnown RBP15.43■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Med23Q80YQ2 1367 aa15.42■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Rgs9O54828 675 aa15.42■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Ncbp1Q3UYV9 790 aaKnown RBP15.42■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Tshz1Q5DTH5 1084 aa15.42■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Ccdc66Q6NS45 935 aa15.42■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 CpdO89001 1377 aa15.42■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Ets1P27577 440 aa15.42■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Jarid2Q62315 1234 aa15.42■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Anapc4Q91W96 807 aa15.42■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 TnmdQ9EP64 317 aa15.42■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Gnat2P50149 354 aa15.41■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Nap1l2P51860 460 aa15.41■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 LyarQ08288 388 aaKnown RBP15.41■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Ctdnep1Q3TP92 244 aa15.41■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Ctr9Q62018 1173 aaKnown RBP15.41■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Cep120Q7TSG1 988 aa15.41■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Nop9Q8BMC4 636 aaKnown RBP15.41■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 CoblQ5NBX1 1337 aaKnown RBP15.41■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Slc4a1P04919 929 aa15.41■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Hmgb2P30681 210 aaKnown RBP15.41■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Gm28047Q3US59 414 aa15.41■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Sugp2Q8CH09 1067 aa15.41■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Iqca1Q9CUL5 857 aa15.41■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 4931408C20RikE9PWP9 1381 aa15.4■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 RdxP26043 583 aaKnown RBP15.4■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Dync1i1O88485 628 aa15.4■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Rasa2P58069 847 aa15.4■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Slc44a1Q6X893 653 aa15.4■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 HdlbpQ8VDJ3 1268 aaKnown RBP15.4■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Ccdc47Q9D024 483 aaKnown RBP15.4■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 Rmi1Q9D4G9 616 aa15.4■□□□□ 0.06
Prpf38b-201ENSMUST00000029480 GalcP54818 684 aa15.39■□□□□ 0.05
Prpf38b-201ENSMUST00000029480 Cnnm2Q3TWN3 875 aa15.39■□□□□ 0.05
Prpf38b-201ENSMUST00000029480 CtifQ6PEE2 600 aaKnown RBP15.39■□□□□ 0.05
Prpf38b-201ENSMUST00000029480 Snx13Q6PHS6 957 aa15.39■□□□□ 0.05
Prpf38b-201ENSMUST00000029480 TnksQ6PFX9 1320 aa15.39■□□□□ 0.05
Prpf38b-201ENSMUST00000029480 Rtkn2Q14B46 604 aa15.39■□□□□ 0.05
Prpf38b-201ENSMUST00000029480 Plekhf1Q3TB82 279 aa15.39■□□□□ 0.05
Prpf38b-201ENSMUST00000029480 Slc38a10Q5I012 1090 aa15.39■□□□□ 0.05
Prpf38b-201ENSMUST00000029480 Serpina10Q8R121 448 aa15.39■□□□□ 0.05
Prpf38b-201ENSMUST00000029480 Nop2Q922K7 793 aaKnown RBP15.39■□□□□ 0.05
Prpf38b-201ENSMUST00000029480 Ankrd49Q8VE42 238 aa15.38■□□□□ 0.05
Prpf38b-201ENSMUST00000029480 Zbtb1Q91VL9 713 aa15.38■□□□□ 0.05
Prpf38b-201ENSMUST00000029480 Dpf1Q9QX66 387 aa15.38■□□□□ 0.05
Prpf38b-201ENSMUST00000029480 Foxo4Q9WVH3 505 aa15.38■□□□□ 0.05
Prpf38b-201ENSMUST00000029480 Ccdc121E9Q6D3 323 aa15.38■□□□□ 0.05
Prpf38b-201ENSMUST00000029480 U2af2P26369 475 aaKnown RBP15.38■□□□□ 0.05
Prpf38b-201ENSMUST00000029480 Cdkn1cP49919 348 aa15.38■□□□□ 0.05
Prpf38b-201ENSMUST00000029480 Anp32eP97822 260 aaKnown RBP15.38■□□□□ 0.05
Prpf38b-201ENSMUST00000029480 Dnaaf2Q8BPI1 814 aa15.38■□□□□ 0.05
Prpf38b-201ENSMUST00000029480 Nip7Q9CXK8 180 aaKnown RBP15.38■□□□□ 0.05
Prpf38b-201ENSMUST00000029480 Cyp3a59D3Z2W7 503 aa15.38■□□□□ 0.05
Prpf38b-201ENSMUST00000029480 Ftl2P49945 183 aa15.38■□□□□ 0.05
Prpf38b-201ENSMUST00000029480 Polr3gQ6NXY9 223 aa15.38■□□□□ 0.05
Prpf38b-201ENSMUST00000029480 Gpatch3Q8BIY1 525 aa15.38■□□□□ 0.05
Prpf38b-201ENSMUST00000029480 Wasf1Q8R5H6 559 aa15.38■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms