RNA–Protein interactions for RNA: ENSMUST00000022328.13

Ldb3-202, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-202ENSMUST00000022328 Sh3bgrQ9WUZ7 214 aa12.79□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Tbc1d8Q9Z1A9 1134 aa12.79□□□□□ -0.36
Ldb3-202ENSMUST00000022328 4931408C20RikE9PWP9 1381 aa12.78□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Gm4340L7N2C4 268 aa12.78□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Sh3bp1P55194 680 aa12.78□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Snrpa1P57784 255 aaKnown RBP12.78□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Ppfia3P60469 1194 aa12.78□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Susd4Q8BH32 490 aa12.78□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Cdca8Q8BHX3 289 aa12.78□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Cnot6lQ8VEG6 555 aa12.78□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Terf2ipQ91VL8 393 aa12.78□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Mast2Q60592 1734 aa12.78□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Cyp3a59D3Z2W7 503 aa12.78□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Oas2E9Q9A9 742 aa12.78□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Hmx1O70218 332 aa12.78□□□□□ -0.36
Ldb3-202ENSMUST00000022328 TrhQ62361 256 aa12.78□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Slf2Q6P9P0 1278 aa12.78□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Fsd2Q8BZ52 692 aa12.78□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Kcnq3Q8K3F6 873 aa12.78□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Trim34aQ99PP6 485 aa12.78□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Cfap99A0A140LIX9 648 aa12.77□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Brpf3B2KF05 1204 aaKnown RBP12.77□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Cspp1B2RX88 1205 aa12.77□□□□□ -0.37
Ldb3-202ENSMUST00000022328 U2af1l4Q8BGJ9 220 aa12.77□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Tpcn2Q8BWC0 731 aa12.77□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Pm20d1Q8C165 503 aa12.77□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Plcd3Q8K2J0 785 aa12.77□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Ttc14Q9CSP9 761 aa12.77□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Odf2lQ9D478 642 aa12.77□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Col4a3bpQ9EQG9 624 aa12.77□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Kansl3A2RSY1 903 aaKnown RBP12.77□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Speer4dL7N216 212 aa12.77□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Znf326O88291 580 aa12.77□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Cdkn1cP49919 348 aa12.77□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Slfnl1Q8BHW9 410 aa12.77□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Sept12Q9D451 317 aa12.77□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Tpd52l1O54818 204 aa12.76□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Kcnj4P52189 445 aa12.76□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Vps33bP59016 617 aa12.76□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Ddb1Q3U1J4 1140 aaKnown RBP12.76□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Polr3gQ6NXY9 223 aa12.76□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Naa16Q9DBB4 864 aa12.76□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Osbpl5Q9ER64 874 aa12.76□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Mroh6V9GX81 722 aa12.76□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Mast3Q3U214 1321 aa12.76□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Miga2Q8BK03 593 aa12.76□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Snw1Q9CSN1 536 aaKnown RBP12.76□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Cdc45Q9Z1X9 566 aa12.76□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Aox4Q3TYQ9 1336 aa12.75□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Kat6bQ8BRB7 1872 aa12.75□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Casp12O08736 419 aa12.75□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Clec11aO88200 328 aa12.75□□□□□ -0.37
Ldb3-202ENSMUST00000022328 CebpzP53569 1052 aaKnown RBP12.75□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Fez2Q6TYB5 348 aa12.75□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Srek1Q8BZX4 494 aaKnown RBP12.75□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Ddx41Q91VN6 622 aaKnown RBP12.75□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Zbtb43Q9DAI4 467 aa12.75□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Hmgn5Q9JL35 406 aa12.75□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Gm20425E9Q035 978 aaKnown RBP12.74□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Dctn1O08788 1281 aa12.74□□□□□ -0.37
Ldb3-202ENSMUST00000022328 RdxP26043 583 aaKnown RBP12.74□□□□□ -0.37
Ldb3-202ENSMUST00000022328 SrprbP47758 269 aa12.74□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Rrp1P56183 494 aaKnown RBP12.74□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Pla2g4fQ50L41 855 aa12.74□□□□□ -0.37
Ldb3-202ENSMUST00000022328 SdsQ8VBT2 327 aa12.74□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Ubxn4Q8VCH8 506 aa12.74□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Gpr108Q91WD0 569 aa12.74□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Tbc1d7Q9D0K0 293 aa12.74□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Telo2Q9DC40 840 aaKnown RBP12.74□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Lipo1J3QME6 396 aa12.74□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Ifit1bl2Q3U687 466 aa12.74□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Acap3Q6NXL5 833 aa12.74□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Gpatch3Q8BIY1 525 aa12.74□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Cfap44E9Q5M6 1843 aa12.74□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Card6E9PWH2 1175 aa12.73□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Ccng2O08918 344 aa12.73□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Hook1Q8BIL5 728 aa12.73□□□□□ -0.37
Ldb3-202ENSMUST00000022328 SowahdQ8BY98 327 aa12.73□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Fer1l6E0CZ42 1862 aa12.73□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Med23Q80YQ2 1367 aa12.73□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Ubap1lG3UW59 384 aa12.73□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Nop14Q8R3N1 860 aaKnown RBP12.73□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Klc3Q91W40 508 aa12.73□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Krt84Q99M73 603 aa12.73□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Ccer1Q9CQL2 403 aa12.73□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Tulp1Q9Z273 543 aa12.73□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Tcof1O08784 1320 aaKnown RBP12.72□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Ubn2Q80WC1 1314 aa12.72□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Frmd7A2AD83 703 aa12.72□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Cyp26a1O55127 497 aa12.72□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Ess2O70279 479 aa12.72□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Pde6aP27664 859 aa12.72□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Atp1a3Q6PIC6 1013 aa12.72□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Pcdhb15Q91Y04 786 aa12.72□□□□□ -0.37
Ldb3-202ENSMUST00000022328 CpdO89001 1377 aa12.72□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Qtrt2B8ZXI1 415 aa12.72□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Cdk4P30285 303 aa12.72□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Rtkn2Q14B46 604 aa12.72□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Taf3Q5HZG4 932 aa12.72□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Prdm1Q60636 856 aa12.72□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 36.6 ms