RNA–Protein interactions for RNA: ENST00000639054.1

PAX6-250, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-250ENST00000639054 FAM216AQ8WUB2 273 aa9.54□□□□□ -0.88
PAX6-250ENST00000639054 C1orf159Q96HA4 380 aa9.54□□□□□ -0.88
PAX6-250ENST00000639054 C7orf69Q9H7B7 122 aa9.54□□□□□ -0.88
PAX6-250ENST00000639054 SHPKQ9UHJ6 478 aa9.54□□□□□ -0.88
PAX6-250ENST00000639054 CENPVL3A0A0U1RRI6 287 aa9.53□□□□□ -0.88
PAX6-250ENST00000639054 LY6LH3BQJ8 138 aa9.53□□□□□ -0.88
PAX6-250ENST00000639054 C1QBP02746 253 aa9.53□□□□□ -0.88
PAX6-250ENST00000639054 G6PCP35575 357 aa9.53□□□□□ -0.88
PAX6-250ENST00000639054 RUSC1-AS1Q66K80 236 aa9.53□□□□□ -0.88
PAX6-250ENST00000639054 TGIF2LXQ8IUE1 241 aa9.53□□□□□ -0.88
PAX6-250ENST00000639054 CCDC28AQ8IWP9 274 aa9.53□□□□□ -0.88
PAX6-250ENST00000639054 VKORC1L1Q8N0U8 176 aa9.53□□□□□ -0.88
PAX6-250ENST00000639054 LRTM2Q8N967 370 aa9.53□□□□□ -0.88
PAX6-250ENST00000639054 RBPMSQ93062 196 aaKnown RBP9.53□□□□□ -0.88
PAX6-250ENST00000639054 FOXC2Q99958 501 aa9.53□□□□□ -0.88
PAX6-250ENST00000639054 NABP2Q9BQ15 211 aa9.53□□□□□ -0.88
PAX6-250ENST00000639054 SOX21Q9Y651 276 aaPredicted RBP9.53□□□□□ -0.88
PAX6-250ENST00000639054 FLNAP21333 2647 aaKnown RBP9.53□□□□□ -0.88
PAX6-250ENST00000639054 KRASP01116 189 aa9.53□□□□□ -0.88
PAX6-250ENST00000639054 IGKV1-5P01602 117 aa9.53□□□□□ -0.88
PAX6-250ENST00000639054 IGKV1-16P04430 117 aa9.53□□□□□ -0.88
PAX6-250ENST00000639054 EPHA1P21709 976 aa9.53□□□□□ -0.88
PAX6-250ENST00000639054 THBS3P49746 956 aa9.53□□□□□ -0.88
PAX6-250ENST00000639054 ZNF137PP52743 207 aa9.53□□□□□ -0.88
PAX6-250ENST00000639054 PDCD10Q9BUL8 212 aa9.53□□□□□ -0.88
PAX6-250ENST00000639054 RAB18Q9NP72 206 aa9.53□□□□□ -0.88
PAX6-250ENST00000639054 GSKIPQ9P0R6 139 aa9.53□□□□□ -0.88
PAX6-250ENST00000639054 AUP1Q9Y679 476 aa9.53□□□□□ -0.88
PAX6-250ENST00000639054 ABCA1O95477 2261 aa9.52□□□□□ -0.88
PAX6-250ENST00000639054 OR2A4O95047 310 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 IGHV4-38-2P0DP08 117 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 M6PRP20645 277 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 HTR1DP28221 377 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 BRD3OSQ6XYD6 125 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 ZNF767PQ75MW2 155 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 SSX9Q7RTT3 188 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 PIP4P2Q8N4L2 257 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 RITA1Q96K30 269 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 OR2A7Q96R45 310 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 FLNBO75369 2602 aaKnown RBP9.52□□□□□ -0.89
PAX6-250ENST00000639054 MYO9AB2RTY4 2548 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 TRAV40A0A0B4J280 105 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 LEUTXA8MZ59 168 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 H0YJW9 148 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 SHOXO15266 292 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 NXPH3O95157 252 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 HLA-GP17693 338 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 CD24P25063 80 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 IL3RAP26951 378 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 SSX2Q16385 188 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 LRRC37A5PQ49AS3 106 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 TPTE2P1Q5T6R2 138 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 GSG1LQ6UXU4 331 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 Q6ZRM9 215 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 MOB3BQ86TA1 216 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 RPEQ96AT9 228 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 GPR146Q96CH1 333 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 AJUBAQ96IF1 538 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 SLC35D1Q9NTN3 355 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 DPM3Q9P2X0 92 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 PRELID3BQ9Y3B1 194 aa9.52□□□□□ -0.89
PAX6-250ENST00000639054 CREBBPQ92793 2442 aa9.51□□□□□ -0.89
PAX6-250ENST00000639054 TRAV20A0A0B4J274 112 aa9.51□□□□□ -0.89
PAX6-250ENST00000639054 IGHV1-3A0A0C4DH29 117 aa9.51□□□□□ -0.89
PAX6-250ENST00000639054 G3V3Q6 166 aa9.51□□□□□ -0.89
PAX6-250ENST00000639054 H7C2Y5 167 aa9.51□□□□□ -0.89
PAX6-250ENST00000639054 UBE2E1P51965 193 aa9.51□□□□□ -0.89
PAX6-250ENST00000639054 IAH1Q2TAA2 248 aaPredicted RBP9.51□□□□□ -0.89
PAX6-250ENST00000639054 FBLN7Q53RD9 439 aa9.51□□□□□ -0.89
PAX6-250ENST00000639054 OR2T35Q8NGX2 323 aa9.51□□□□□ -0.89
PAX6-250ENST00000639054 OTOGQ6ZRI0 2925 aa9.51□□□□□ -0.89
PAX6-250ENST00000639054 CSPG4Q6UVK1 2322 aa9.51□□□□□ -0.89
PAX6-250ENST00000639054 SRRM4A7MD48 611 aaKnown RBP9.51□□□□□ -0.89
PAX6-250ENST00000639054 IFNA21P01568 189 aa9.51□□□□□ -0.89
PAX6-250ENST00000639054 GAPDHP04406 335 aaKnown RBP9.51□□□□□ -0.89
PAX6-250ENST00000639054 SAA4P35542 130 aa9.51□□□□□ -0.89
PAX6-250ENST00000639054 AKR1C2P52895 323 aa9.51□□□□□ -0.89
PAX6-250ENST00000639054 AP2S1P53680 142 aaPredicted RBP9.51□□□□□ -0.89
PAX6-250ENST00000639054 LGALS4P56470 323 aa9.51□□□□□ -0.89
PAX6-250ENST00000639054 SRPXP78539 464 aa9.51□□□□□ -0.89
PAX6-250ENST00000639054 TAGLNQ01995 201 aaKnown RBP9.51□□□□□ -0.89
PAX6-250ENST00000639054 NMSQ5H8A3 153 aa9.51□□□□□ -0.89
PAX6-250ENST00000639054 OR5AN1Q8NGI8 311 aa9.51□□□□□ -0.89
PAX6-250ENST00000639054 RNASE11Q8TAA1 199 aaKnown RBP9.51□□□□□ -0.89
PAX6-250ENST00000639054 ARPC5LQ9BPX5 153 aa9.51□□□□□ -0.89
PAX6-250ENST00000639054 AMMECR1Q9Y4X0 333 aaPredicted RBP9.51□□□□□ -0.89
PAX6-250ENST00000639054 A0A1W2PPI3 338 aa9.5□□□□□ -0.89
PAX6-250ENST00000639054 TIMM23O14925 209 aa9.5□□□□□ -0.89
PAX6-250ENST00000639054 B3GALNT1O75752 331 aa9.5□□□□□ -0.89
PAX6-250ENST00000639054 GIPP09681 153 aaPredicted RBP9.5□□□□□ -0.89
PAX6-250ENST00000639054 KLF17Q5JT82 389 aaPredicted RBP9.5□□□□□ -0.89
PAX6-250ENST00000639054 FOXRED2Q8IWF2 684 aa9.5□□□□□ -0.89
PAX6-250ENST00000639054 IL22RA2Q969J5 263 aa9.5□□□□□ -0.89
PAX6-250ENST00000639054 R3HDM4Q96D70 268 aa9.5□□□□□ -0.89
PAX6-250ENST00000639054 ADTRPQ96IZ2 230 aa9.5□□□□□ -0.89
PAX6-250ENST00000639054 C2orf50Q96LR7 162 aa9.5□□□□□ -0.89
PAX6-250ENST00000639054 RANBP3Q9H6Z4 567 aaPredicted RBP9.5□□□□□ -0.89
PAX6-250ENST00000639054 NSG2Q9Y328 171 aa9.5□□□□□ -0.89
PAX6-250ENST00000639054 TMED3Q9Y3Q3 217 aa9.5□□□□□ -0.89
PAX6-250ENST00000639054 HSPB11Q9Y547 144 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms