RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 QTRT1Q9BXR0 403 aaKnown RBP13.75□□□□□ -0.21
GABRB3-215ENST00000622697 SP9P0CG40 484 aa13.75□□□□□ -0.21
GABRB3-215ENST00000622697 BIVMQ86UB2 503 aa13.75□□□□□ -0.21
GABRB3-215ENST00000622697 MARS2Q96GW9 593 aaKnown RBP13.75□□□□□ -0.21
GABRB3-215ENST00000622697 IMMP1LQ96LU5 166 aa13.75□□□□□ -0.21
GABRB3-215ENST00000622697 RALGAPA1Q6GYQ0 2036 aa13.75□□□□□ -0.21
GABRB3-215ENST00000622697 IGKV1D-8A0A087WSZ0 117 aa13.75□□□□□ -0.21
GABRB3-215ENST00000622697 LOC105371267A0A1B0GV96 52 aa13.75□□□□□ -0.21
GABRB3-215ENST00000622697 H0YIZ8 118 aa13.75□□□□□ -0.21
GABRB3-215ENST00000622697 LINC00869P0C866 280 aa13.75□□□□□ -0.21
GABRB3-215ENST00000622697 COX5BP10606 129 aa13.75□□□□□ -0.21
GABRB3-215ENST00000622697 PRNTQ86SH4 94 aa13.75□□□□□ -0.21
GABRB3-215ENST00000622697 MGAMO43451 1857 aa13.75□□□□□ -0.21
GABRB3-215ENST00000622697 EFNA2O43921 213 aa13.75□□□□□ -0.21
GABRB3-215ENST00000622697 RPL39P5Q59GN2 51 aa13.75□□□□□ -0.21
GABRB3-215ENST00000622697 MRPL14Q6P1L8 145 aaKnown RBP13.75□□□□□ -0.21
GABRB3-215ENST00000622697 FAM117AQ9C073 453 aa13.74□□□□□ -0.21
GABRB3-215ENST00000622697 GOSR1O95249 250 aa13.74□□□□□ -0.21
GABRB3-215ENST00000622697 ORM1P02763 201 aa13.74□□□□□ -0.21
GABRB3-215ENST00000622697 REG1AP05451 166 aa13.74□□□□□ -0.21
GABRB3-215ENST00000622697 UBTD1Q9HAC8 227 aa13.74□□□□□ -0.21
GABRB3-215ENST00000622697 CISD1Q9NZ45 108 aaKnown RBP13.74□□□□□ -0.21
GABRB3-215ENST00000622697 FDCSPQ8NFU4 85 aa13.74□□□□□ -0.21
GABRB3-215ENST00000622697 PARLQ9H300 379 aa13.74□□□□□ -0.21
GABRB3-215ENST00000622697 ZSWIM8A7E2V4 1837 aa13.74□□□□□ -0.21
GABRB3-215ENST00000622697 AHRRA9YTQ3 701 aa13.74□□□□□ -0.21
GABRB3-215ENST00000622697 FAM201AQ5SY85 155 aa13.74□□□□□ -0.21
GABRB3-215ENST00000622697 PQLC2Q6ZP29 291 aa13.74□□□□□ -0.21
GABRB3-215ENST00000622697 COL4A6Q14031 1691 aa13.74□□□□□ -0.21
GABRB3-215ENST00000622697 F5H697 171 aa13.74□□□□□ -0.21
GABRB3-215ENST00000622697 CELA3BP08861 270 aa13.74□□□□□ -0.21
GABRB3-215ENST00000622697 VWA1Q6PCB0 445 aa13.74□□□□□ -0.21
GABRB3-215ENST00000622697 TEX50A0A1B0GTY4 177 aa13.73□□□□□ -0.21
GABRB3-215ENST00000622697 H3BTX0 84 aa13.73□□□□□ -0.21
GABRB3-215ENST00000622697 TRGC1P0CF51 173 aa13.73□□□□□ -0.21
GABRB3-215ENST00000622697 EAF1Q96JC9 268 aaPredicted RBP13.73□□□□□ -0.21
GABRB3-215ENST00000622697 HSPB9Q9BQS6 159 aa13.73□□□□□ -0.21
GABRB3-215ENST00000622697 DCTN5Q9BTE1 182 aa13.73□□□□□ -0.21
GABRB3-215ENST00000622697 SMPD2O60906 423 aa13.73□□□□□ -0.21
GABRB3-215ENST00000622697 FAM87AP0C7U9 286 aa13.73□□□□□ -0.21
GABRB3-215ENST00000622697 ZNF385CQ66K41 422 aaPredicted RBP13.73□□□□□ -0.21
GABRB3-215ENST00000622697 RTN4RL2Q86UN3 420 aa13.73□□□□□ -0.21
GABRB3-215ENST00000622697 ZNF441Q8N8Z8 693 aa13.73□□□□□ -0.21
GABRB3-215ENST00000622697 CACNA1DQ01668 2161 aa13.73□□□□□ -0.21
GABRB3-215ENST00000622697 ASCL5Q7RTU5 278 aa13.73□□□□□ -0.21
GABRB3-215ENST00000622697 LSM10Q969L4 123 aaKnown RBP13.73□□□□□ -0.21
GABRB3-215ENST00000622697 SMIM8Q96KF7 97 aa13.73□□□□□ -0.21
GABRB3-215ENST00000622697 LGALS7P47929 136 aa13.72□□□□□ -0.21
GABRB3-215ENST00000622697 MYLKQ15746 1914 aa13.72□□□□□ -0.21
GABRB3-215ENST00000622697 DNASE2O00115 360 aaPredicted RBP13.72□□□□□ -0.21
GABRB3-215ENST00000622697 CCL21O00585 134 aa13.72□□□□□ -0.21
GABRB3-215ENST00000622697 ECSCRQ19T08 205 aa13.72□□□□□ -0.21
GABRB3-215ENST00000622697 C12orf77C9JDV5 145 aa13.72□□□□□ -0.21
GABRB3-215ENST00000622697 SLC25A17O43808 307 aa13.72□□□□□ -0.21
GABRB3-215ENST00000622697 KIAA1644Q3SXP7 199 aa13.72□□□□□ -0.21
GABRB3-215ENST00000622697 RNF144BQ7Z419 303 aa13.72□□□□□ -0.21
GABRB3-215ENST00000622697 ELOVL1Q9BW60 279 aa13.72□□□□□ -0.21
GABRB3-215ENST00000622697 ZNF318Q5VUA4 2279 aa13.72□□□□□ -0.21
GABRB3-215ENST00000622697 TFF1P04155 84 aa13.72□□□□□ -0.21
GABRB3-215ENST00000622697 HIST1H1EP10412 219 aaKnown RBP13.72□□□□□ -0.21
GABRB3-215ENST00000622697 SLC25A53Q5H9E4 307 aa13.72□□□□□ -0.21
GABRB3-215ENST00000622697 ZNF788Q6ZQV5 615 aa13.72□□□□□ -0.21
GABRB3-215ENST00000622697 OR1P1Q8NH06 330 aa13.72□□□□□ -0.21
GABRB3-215ENST00000622697 RCC1LQ96I51 464 aaKnown RBP13.72□□□□□ -0.21
GABRB3-215ENST00000622697 DIRC3C9JPN6 131 aa13.72□□□□□ -0.21
GABRB3-215ENST00000622697 RPL8P62917 257 aaKnown RBP13.72□□□□□ -0.21
GABRB3-215ENST00000622697 FAM209BQ5JX69 171 aa13.72□□□□□ -0.21
GABRB3-215ENST00000622697 WDFY1Q8IWB7 410 aa13.72□□□□□ -0.21
GABRB3-215ENST00000622697 Q8WTZ3 238 aa13.72□□□□□ -0.21
GABRB3-215ENST00000622697 GALNT14Q96FL9 552 aa13.72□□□□□ -0.21
GABRB3-215ENST00000622697 GSX1Q9H4S2 264 aaPredicted RBP13.72□□□□□ -0.21
GABRB3-215ENST00000622697 TCF19Q9Y242 345 aa13.72□□□□□ -0.21
GABRB3-215ENST00000622697 SRP14P37108 136 aaKnown RBP13.71□□□□□ -0.21
GABRB3-215ENST00000622697 KRTCAP3Q53RY4 240 aa13.71□□□□□ -0.21
GABRB3-215ENST00000622697 IBA57Q5T440 356 aaKnown RBP13.71□□□□□ -0.21
GABRB3-215ENST00000622697 FGFBP3Q8TAT2 258 aa13.71□□□□□ -0.21
GABRB3-215ENST00000622697 SCN8AQ9UQD0 1980 aa13.71□□□□□ -0.21
GABRB3-215ENST00000622697 CNOT1A5YKK6 2376 aaKnown RBP13.71□□□□□ -0.21
GABRB3-215ENST00000622697 IGLV3-12A0A075B6K2 115 aa13.71□□□□□ -0.21
GABRB3-215ENST00000622697 IGKV1D-13A0A0B4J2D9 117 aa13.71□□□□□ -0.21
GABRB3-215ENST00000622697 PRSS1P07477 247 aa13.71□□□□□ -0.21
GABRB3-215ENST00000622697 IGKV1-13P0DP09 117 aa13.71□□□□□ -0.21
GABRB3-215ENST00000622697 ZNF25P17030 456 aaPredicted RBP13.71□□□□□ -0.21
GABRB3-215ENST00000622697 CRYBB3P26998 211 aa13.71□□□□□ -0.21
GABRB3-215ENST00000622697 GCSAMQ8N6F7 178 aa13.71□□□□□ -0.21
GABRB3-215ENST00000622697 BET1LQ9NYM9 111 aa13.71□□□□□ -0.21
GABRB3-215ENST00000622697 MPDU1O75352 247 aa13.71□□□□□ -0.21
GABRB3-215ENST00000622697 HYPMO75409 117 aa13.71□□□□□ -0.21
GABRB3-215ENST00000622697 P2RX4Q99571 388 aa13.71□□□□□ -0.21
GABRB3-215ENST00000622697 C1QTNF5Q9BXJ0 243 aa13.71□□□□□ -0.21
GABRB3-215ENST00000622697 EP300Q09472 2414 aaPredicted RBP13.71□□□□□ -0.22
GABRB3-215ENST00000622697 FAM90A26D6RGX4 464 aa13.71□□□□□ -0.22
GABRB3-215ENST00000622697 RPL27AP46776 148 aaKnown RBP13.71□□□□□ -0.22
GABRB3-215ENST00000622697 RND2P52198 227 aa13.71□□□□□ -0.22
GABRB3-215ENST00000622697 LINC00470Q9BZP3 86 aa13.71□□□□□ -0.22
GABRB3-215ENST00000622697 CARHSP1Q9Y2V2 147 aaKnown RBP13.71□□□□□ -0.22
GABRB3-215ENST00000622697 GRIFINA4D1Z8 144 aa13.7□□□□□ -0.22
GABRB3-215ENST00000622697 AGAP20933 346 aa13.7□□□□□ -0.22
GABRB3-215ENST00000622697 REPIN1Q9BWE0 567 aaKnown RBP13.7□□□□□ -0.22
GABRB3-215ENST00000622697 HEXA-AS1Q9H8Q6 139 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms