RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 PTAFRP25105 342 aa16.36■□□□□ 0.21
SMARCD2-212ENST00000613943 TAGLN2P37802 199 aaKnown RBP16.36■□□□□ 0.21
SMARCD2-212ENST00000613943 SNRPEP62304 92 aaKnown RBP16.36■□□□□ 0.21
SMARCD2-212ENST00000613943 EGLN1Q9GZT9 426 aa16.36■□□□□ 0.21
SMARCD2-212ENST00000613943 Q9UFV3 132 aa16.36■□□□□ 0.21
SMARCD2-212ENST00000613943 PCP4L1A6NKN8 68 aa16.36■□□□□ 0.21
SMARCD2-212ENST00000613943 OR2C1O95371 312 aa16.36■□□□□ 0.21
SMARCD2-212ENST00000613943 IFNA17P01571 189 aa16.36■□□□□ 0.21
SMARCD2-212ENST00000613943 GYPAP02724 150 aa16.36■□□□□ 0.21
SMARCD2-212ENST00000613943 MT-ND4LP03901 98 aa16.36■□□□□ 0.21
SMARCD2-212ENST00000613943 FGF7P21781 194 aa16.36■□□□□ 0.21
SMARCD2-212ENST00000613943 C17orf58Q2M2W7 97 aa16.36■□□□□ 0.21
SMARCD2-212ENST00000613943 TMEM41BQ5BJD5 291 aa16.36■□□□□ 0.21
SMARCD2-212ENST00000613943 DOLPP1Q86YN1 238 aa16.36■□□□□ 0.21
SMARCD2-212ENST00000613943 FAM216BQ8N7L0 139 aa16.36■□□□□ 0.21
SMARCD2-212ENST00000613943 EDARADDQ8WWZ3 215 aa16.36■□□□□ 0.21
SMARCD2-212ENST00000613943 CCL13Q99616 98 aa16.36■□□□□ 0.21
SMARCD2-212ENST00000613943 SMDT1Q9H4I9 107 aa16.36■□□□□ 0.21
SMARCD2-212ENST00000613943 ZNRD1Q9P1U0 126 aa16.36■□□□□ 0.21
SMARCD2-212ENST00000613943 JPT1Q9UK76 154 aa16.36■□□□□ 0.21
SMARCD2-212ENST00000613943 MAP1LC3B2A6NCE7 125 aa16.35■□□□□ 0.21
SMARCD2-212ENST00000613943 CFHR2P36980 270 aa16.35■□□□□ 0.21
SMARCD2-212ENST00000613943 CCL8P80075 99 aa16.35■□□□□ 0.21
SMARCD2-212ENST00000613943 WFDC8Q8IUA0 241 aa16.35■□□□□ 0.21
SMARCD2-212ENST00000613943 LINC00518Q8N0U6 118 aa16.35■□□□□ 0.21
SMARCD2-212ENST00000613943 MAP1LC3BQ9GZQ8 125 aa16.35■□□□□ 0.21
SMARCD2-212ENST00000613943 BCL2P10415 239 aa16.35■□□□□ 0.21
SMARCD2-212ENST00000613943 RAB5AP20339 215 aa16.35■□□□□ 0.21
SMARCD2-212ENST00000613943 PAX6P26367 422 aa16.35■□□□□ 0.21
SMARCD2-212ENST00000613943 PAX5Q02548 391 aa16.35■□□□□ 0.21
SMARCD2-212ENST00000613943 PRR30Q53SZ7 412 aaPredicted RBP16.35■□□□□ 0.21
SMARCD2-212ENST00000613943 OR10P1Q8NGE3 313 aa16.35■□□□□ 0.21
SMARCD2-212ENST00000613943 BIN3Q9NQY0 253 aa16.35■□□□□ 0.21
SMARCD2-212ENST00000613943 TRAV1-1A0A0B4J248 108 aa16.34■□□□□ 0.21
SMARCD2-212ENST00000613943 SERF2P84101 59 aa16.34■□□□□ 0.21
SMARCD2-212ENST00000613943 KHDC3LQ587J8 217 aa16.34■□□□□ 0.21
SMARCD2-212ENST00000613943 PRAMEF5Q5TYX0 476 aa16.34■□□□□ 0.21
SMARCD2-212ENST00000613943 TRAT1Q6PIZ9 186 aa16.34■□□□□ 0.21
SMARCD2-212ENST00000613943 TCF23Q7RTU1 214 aa16.34■□□□□ 0.21
SMARCD2-212ENST00000613943 PPP1R35Q8TAP8 253 aa16.34■□□□□ 0.21
SMARCD2-212ENST00000613943 NIPSNAP3BQ9BS92 247 aa16.34■□□□□ 0.21
SMARCD2-212ENST00000613943 YPEL1O60688 119 aa16.34■□□□□ 0.21
SMARCD2-212ENST00000613943 MMP23AO75900 390 aa16.34■□□□□ 0.21
SMARCD2-212ENST00000613943 FOLR2P14207 255 aa16.34■□□□□ 0.21
SMARCD2-212ENST00000613943 GNG10P50151 68 aa16.34■□□□□ 0.21
SMARCD2-212ENST00000613943 NUBP1P53384 320 aa16.34■□□□□ 0.21
SMARCD2-212ENST00000613943 RAB5BP61020 215 aa16.34■□□□□ 0.21
SMARCD2-212ENST00000613943 KDF1Q8NAX2 398 aaPredicted RBP16.34■□□□□ 0.21
SMARCD2-212ENST00000613943 GATAD1Q8WUU5 269 aa16.34■□□□□ 0.21
SMARCD2-212ENST00000613943 MBD3L1Q8WWY6 194 aa16.34■□□□□ 0.21
SMARCD2-212ENST00000613943 YPEL2Q96QA6 119 aa16.34■□□□□ 0.21
SMARCD2-212ENST00000613943 HCFC1P51610 2035 aa16.34■□□□□ 0.21
SMARCD2-212ENST00000613943 CUL9Q8IWT3 2517 aa16.33■□□□□ 0.21
SMARCD2-212ENST00000613943 C15orf62A8K5M9 175 aa16.33■□□□□ 0.2
SMARCD2-212ENST00000613943 C1orf196B1AJZ1 125 aa16.33■□□□□ 0.2
SMARCD2-212ENST00000613943 MKRN2OSH3BPM6 223 aa16.33■□□□□ 0.2
SMARCD2-212ENST00000613943 CT45A1Q5HYN5 189 aa16.33■□□□□ 0.2
SMARCD2-212ENST00000613943 FAM90A2PQ658T7 463 aa16.33■□□□□ 0.2
SMARCD2-212ENST00000613943 CT45A3Q8NHU0 189 aa16.33■□□□□ 0.2
SMARCD2-212ENST00000613943 LHX4Q969G2 390 aa16.33■□□□□ 0.2
SMARCD2-212ENST00000613943 TMEM147Q9BVK8 224 aa16.33■□□□□ 0.2
SMARCD2-212ENST00000613943 TUBA4BQ9H853 241 aa16.33■□□□□ 0.2
SMARCD2-212ENST00000613943 RNF7Q9UBF6 113 aa16.33■□□□□ 0.2
SMARCD2-212ENST00000613943 OR8U8P0C7N1 319 aa16.33■□□□□ 0.2
SMARCD2-212ENST00000613943 HIPK2Q9H2X6 1198 aa16.33■□□□□ 0.2
SMARCD2-212ENST00000613943 F2RL2O00254 374 aa16.32■□□□□ 0.2
SMARCD2-212ENST00000613943 NBL1P41271 181 aa16.32■□□□□ 0.2
SMARCD2-212ENST00000613943 EIF2S3LQ2VIR3 472 aaKnown RBP16.32■□□□□ 0.2
SMARCD2-212ENST00000613943 IQCF2Q8IXL9 164 aa16.32■□□□□ 0.2
SMARCD2-212ENST00000613943 Q8NA96 180 aa16.32■□□□□ 0.2
SMARCD2-212ENST00000613943 UNKLQ9H9P5 680 aaKnown RBP16.32■□□□□ 0.2
SMARCD2-212ENST00000613943 SLC39A9Q9NUM3 307 aa16.32■□□□□ 0.2
SMARCD2-212ENST00000613943 OR6C3Q9NZP0 311 aa16.32■□□□□ 0.2
SMARCD2-212ENST00000613943 KLF2Q9Y5W3 355 aaPredicted RBP16.32■□□□□ 0.2
SMARCD2-212ENST00000613943 SAA2-SAA4A0A096LPE2 208 aa16.31■□□□□ 0.2
SMARCD2-212ENST00000613943 SAA2P0DJI9 122 aaPredicted RBP16.31■□□□□ 0.2
SMARCD2-212ENST00000613943 CR1LQ2VPA4 569 aa16.31■□□□□ 0.2
SMARCD2-212ENST00000613943 KRTCAP3Q53RY4 240 aa16.31■□□□□ 0.2
SMARCD2-212ENST00000613943 GCSAMLQ5JQS6 135 aa16.31■□□□□ 0.2
SMARCD2-212ENST00000613943 FFAR4Q5NUL3 377 aa16.31■□□□□ 0.2
SMARCD2-212ENST00000613943 STUMQ69YW2 141 aa16.31■□□□□ 0.2
SMARCD2-212ENST00000613943 ASCL5Q7RTU5 278 aa16.31■□□□□ 0.2
SMARCD2-212ENST00000613943 CA5BP1Q8WTZ4 195 aa16.31■□□□□ 0.2
SMARCD2-212ENST00000613943 TVP23CQ96ET8 276 aa16.31■□□□□ 0.2
SMARCD2-212ENST00000613943 GAFA1Q96PS6 74 aa16.31■□□□□ 0.2
SMARCD2-212ENST00000613943 NPCDR1Q9BY65 106 aa16.31■□□□□ 0.2
SMARCD2-212ENST00000613943 CISD1Q9NZ45 108 aaKnown RBP16.31■□□□□ 0.2
SMARCD2-212ENST00000613943 LAMP3Q9UQV4 416 aa16.31■□□□□ 0.2
SMARCD2-212ENST00000613943 RAI1Q7Z5J4 1906 aaPredicted RBP16.31■□□□□ 0.2
SMARCD2-212ENST00000613943 HPRT1P00492 218 aa16.31■□□□□ 0.2
SMARCD2-212ENST00000613943 MYOD1P15172 320 aa16.31■□□□□ 0.2
SMARCD2-212ENST00000613943 TDGF1P3P51864 188 aa16.31■□□□□ 0.2
SMARCD2-212ENST00000613943 SELENOVP59797 346 aa16.31■□□□□ 0.2
SMARCD2-212ENST00000613943 FOXC1Q12948 553 aa16.31■□□□□ 0.2
SMARCD2-212ENST00000613943 YPEL4Q96NS1 127 aa16.31■□□□□ 0.2
SMARCD2-212ENST00000613943 TLN1Q9Y490 2541 aaKnown RBP16.31■□□□□ 0.2
SMARCD2-212ENST00000613943 CGB3P0DN86 165 aa16.3■□□□□ 0.2
SMARCD2-212ENST00000613943 CGB7P0DN87 165 aa16.3■□□□□ 0.2
SMARCD2-212ENST00000613943 LYG1Q8N1E2 194 aa16.3■□□□□ 0.2
SMARCD2-212ENST00000613943 OR10G4Q8NGN3 311 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms