RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 NMSQ5H8A3 153 aa8.95□□□□□ -0.98
USB1-212ENST00000566082 STUMQ69YW2 141 aa8.95□□□□□ -0.98
USB1-212ENST00000566082 SFRP2Q96HF1 295 aa8.95□□□□□ -0.98
USB1-212ENST00000566082 POM121L2Q96KW2 1035 aa8.95□□□□□ -0.98
USB1-212ENST00000566082 ANAPC10Q9UM13 185 aa8.95□□□□□ -0.98
USB1-212ENST00000566082 LRRC30A6NM36 301 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 SPRY3O43610 288 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 C1QTNF9P0C862 333 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 COX6A1P12074 109 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 CD33P20138 364 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 USF1P22415 310 aaPredicted RBP8.94□□□□□ -0.98
USB1-212ENST00000566082 MEOX1P50221 254 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 Q56UQ5 140 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 TRAT1Q6PIZ9 186 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 ZNF664Q8N3J9 261 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 SCCPDHQ8NBX0 429 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 ZBTB34Q8NCN2 500 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 NPCDR1Q9BY65 106 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 DENND4AQ7Z401 1863 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 A0A0G2JRQ6 117 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 FAM90A26D6RGX4 464 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 M0R2Z0 102 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 NAPSAO96009 420 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 MT-CO3P00414 261 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 CRYGSP22914 178 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 NPY1RP25929 384 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 IL3RAP26951 378 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 UBE2L3P68036 154 aaKnown RBP8.94□□□□□ -0.98
USB1-212ENST00000566082 FAM90A2PQ658T7 463 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 VKORC1L1Q8N0U8 176 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 RPP25LQ8N5L8 163 aaKnown RBP8.94□□□□□ -0.98
USB1-212ENST00000566082 ZIC4Q8N9L1 334 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 FAM216AQ8WUB2 273 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 TMEM170AQ8WVE7 144 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 QTRT1Q9BXR0 403 aaKnown RBP8.94□□□□□ -0.98
USB1-212ENST00000566082 ZNF835Q9Y2P0 537 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 EP300Q09472 2414 aaPredicted RBP8.94□□□□□ -0.98
USB1-212ENST00000566082 MARCH11A6NNE9 402 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 HINT1P49773 126 aaPredicted RBP8.94□□□□□ -0.98
USB1-212ENST00000566082 ERHP84090 104 aaKnown RBP8.94□□□□□ -0.98
USB1-212ENST00000566082 TEPPQ6URK8 271 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 SAXO1Q8IYX7 474 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 ABHD12Q8N2K0 398 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 ZNF596Q8TC21 504 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 CT55Q8WUE5 264 aa8.94□□□□□ -0.98
USB1-212ENST00000566082 OR4A8P0C604 315 aa8.93□□□□□ -0.98
USB1-212ENST00000566082 GZMBP10144 247 aa8.93□□□□□ -0.98
USB1-212ENST00000566082 ANOS1P23352 680 aa8.93□□□□□ -0.98
USB1-212ENST00000566082 RTL8BQ17RB0 113 aa8.93□□□□□ -0.98
USB1-212ENST00000566082 SPATA45Q537H7 98 aa8.93□□□□□ -0.98
USB1-212ENST00000566082 DMRTA1Q5VZB9 504 aa8.93□□□□□ -0.98
USB1-212ENST00000566082 ZNF645Q8N7E2 425 aa8.93□□□□□ -0.98
USB1-212ENST00000566082 REPIN1Q9BWE0 567 aaKnown RBP8.93□□□□□ -0.98
USB1-212ENST00000566082 HES7Q9BYE0 225 aa8.93□□□□□ -0.98
USB1-212ENST00000566082 SH3BGRL2Q9UJC5 107 aa8.93□□□□□ -0.98
USB1-212ENST00000566082 ABCA1O95477 2261 aa8.93□□□□□ -0.98
USB1-212ENST00000566082 IGLV3-12A0A075B6K2 115 aa8.93□□□□□ -0.98
USB1-212ENST00000566082 LOC102724200A0A096LPH7 203 aaPredicted RBP8.93□□□□□ -0.98
USB1-212ENST00000566082 AGFG2O95081 481 aa8.93□□□□□ -0.98
USB1-212ENST00000566082 SSPNQ14714 243 aa8.93□□□□□ -0.98
USB1-212ENST00000566082 OR2M7Q8NG81 312 aa8.93□□□□□ -0.98
USB1-212ENST00000566082 VENTXO95231 258 aa8.93□□□□□ -0.98
USB1-212ENST00000566082 MFAP2P55001 183 aa8.93□□□□□ -0.98
USB1-212ENST00000566082 LYPD6Q86Y78 171 aa8.93□□□□□ -0.98
USB1-212ENST00000566082 BLNKQ8WV28 456 aa8.93□□□□□ -0.98
USB1-212ENST00000566082 MBD3L1Q8WWY6 194 aa8.93□□□□□ -0.98
USB1-212ENST00000566082 NPVFQ9HCQ7 196 aa8.93□□□□□ -0.98
USB1-212ENST00000566082 DOCK10Q96BY6 2186 aa8.93□□□□□ -0.98
USB1-212ENST00000566082 IGLV3-19P01714 112 aa8.92□□□□□ -0.98
USB1-212ENST00000566082 CD82P27701 267 aa8.92□□□□□ -0.98
USB1-212ENST00000566082 PTGDSP41222 190 aa8.92□□□□□ -0.98
USB1-212ENST00000566082 RPL31P62899 125 aaKnown RBP8.92□□□□□ -0.98
USB1-212ENST00000566082 LCN2P80188 198 aa8.92□□□□□ -0.98
USB1-212ENST00000566082 HIST3H3Q16695 136 aa8.92□□□□□ -0.98
USB1-212ENST00000566082 OR4S2Q8NH73 311 aa8.92□□□□□ -0.98
USB1-212ENST00000566082 WDYHV1Q96HA8 205 aa8.92□□□□□ -0.98
USB1-212ENST00000566082 TMEM167BQ9NRX6 74 aa8.92□□□□□ -0.98
USB1-212ENST00000566082 TMEM242Q9NWH2 141 aa8.92□□□□□ -0.98
USB1-212ENST00000566082 A6NNC1 897 aa8.92□□□□□ -0.98
USB1-212ENST00000566082 C17orf98A8MV24 154 aa8.92□□□□□ -0.98
USB1-212ENST00000566082 CYC1P08574 325 aa8.92□□□□□ -0.98
USB1-212ENST00000566082 SSTR5P35346 364 aa8.92□□□□□ -0.98
USB1-212ENST00000566082 TNFSF10P50591 281 aa8.92□□□□□ -0.98
USB1-212ENST00000566082 TRA2AQ13595 282 aaKnown RBP eCLIP8.92□□□□□ -0.98
USB1-212ENST00000566082 PQLC2Q6ZP29 291 aa8.92□□□□□ -0.98
USB1-212ENST00000566082 ZCCHC14Q8WYQ9 949 aaKnown RBP8.92□□□□□ -0.98
USB1-212ENST00000566082 OR5P3Q8WZ94 311 aa8.92□□□□□ -0.98
USB1-212ENST00000566082 C1QTNF5Q9BXJ0 243 aa8.92□□□□□ -0.98
USB1-212ENST00000566082 TECRQ9NZ01 308 aaKnown RBP8.92□□□□□ -0.98
USB1-212ENST00000566082 IGLV3-32A0A0A0MS00 114 aa8.92□□□□□ -0.98
USB1-212ENST00000566082 TRGV10A0A0A0MS01 117 aa8.92□□□□□ -0.98
USB1-212ENST00000566082 GCSAMLQ5JQS6 135 aa8.92□□□□□ -0.98
USB1-212ENST00000566082 FBXW9Q5XUX1 488 aa8.92□□□□□ -0.98
USB1-212ENST00000566082 Q6ZRM9 215 aa8.92□□□□□ -0.98
USB1-212ENST00000566082 MMD2Q8IY49 270 aa8.92□□□□□ -0.98
USB1-212ENST00000566082 NHLRC2Q8NBF2 726 aa8.92□□□□□ -0.98
USB1-212ENST00000566082 WIPI2Q9Y4P8 454 aa8.92□□□□□ -0.98
USB1-212ENST00000566082 NCOA6Q14686 2063 aaPredicted RBP8.92□□□□□ -0.98
USB1-212ENST00000566082 SCO2A0A1W2PP80 73 aa8.91□□□□□ -0.98
USB1-212ENST00000566082 M0R1B8 84 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms