RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 GVQW1Q8N7I0 195 aa9.7□□□□□ -0.86
SMAD3-208ENST00000558827 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.7□□□□□ -0.86
SMAD3-208ENST00000558827 SLC25A38Q96DW6 304 aa9.7□□□□□ -0.86
SMAD3-208ENST00000558827 RNF5Q99942 180 aa9.7□□□□□ -0.86
SMAD3-208ENST00000558827 DCUN1D5Q9BTE7 237 aa9.7□□□□□ -0.86
SMAD3-208ENST00000558827 GPR61Q9BZJ8 451 aa9.7□□□□□ -0.86
SMAD3-208ENST00000558827 ZNF580Q9UK33 172 aa9.7□□□□□ -0.86
SMAD3-208ENST00000558827 ANKRD34BA5PLL1 514 aa9.69□□□□□ -0.86
SMAD3-208ENST00000558827 FCGR3BO75015 233 aa9.69□□□□□ -0.86
SMAD3-208ENST00000558827 LY86O95711 162 aa9.69□□□□□ -0.86
SMAD3-208ENST00000558827 TRGV3P03979 118 aa9.69□□□□□ -0.86
SMAD3-208ENST00000558827 DTYMKP23919 212 aa9.69□□□□□ -0.86
SMAD3-208ENST00000558827 DUTP33316 252 aaKnown RBP9.69□□□□□ -0.86
SMAD3-208ENST00000558827 RPL30P62888 115 aaKnown RBP9.69□□□□□ -0.86
SMAD3-208ENST00000558827 C9orf66Q5T8R8 295 aa9.69□□□□□ -0.86
SMAD3-208ENST00000558827 SORL1Q92673 2214 aa9.69□□□□□ -0.86
SMAD3-208ENST00000558827 DLX4Q92988 240 aaPredicted RBP9.69□□□□□ -0.86
SMAD3-208ENST00000558827 SCOCQ9UIL1 159 aa9.69□□□□□ -0.86
SMAD3-208ENST00000558827 SPDEFO95238 335 aa9.68□□□□□ -0.86
SMAD3-208ENST00000558827 CRYGBP07316 175 aa9.68□□□□□ -0.86
SMAD3-208ENST00000558827 RPS19P39019 145 aaKnown RBP9.68□□□□□ -0.86
SMAD3-208ENST00000558827 CRIP2P52943 208 aaPredicted RBP9.68□□□□□ -0.86
SMAD3-208ENST00000558827 CBX3Q13185 183 aa9.68□□□□□ -0.86
SMAD3-208ENST00000558827 FHL3Q13643 280 aa9.68□□□□□ -0.86
SMAD3-208ENST00000558827 ARL6IP1Q15041 203 aa9.68□□□□□ -0.86
SMAD3-208ENST00000558827 TNXAQ16473 311 aa9.68□□□□□ -0.86
SMAD3-208ENST00000558827 RTL8BQ17RB0 113 aa9.68□□□□□ -0.86
SMAD3-208ENST00000558827 TMEM177Q53S58 311 aa9.68□□□□□ -0.86
SMAD3-208ENST00000558827 Q6ZS49 121 aa9.68□□□□□ -0.86
SMAD3-208ENST00000558827 HAPLN4Q86UW8 402 aa9.68□□□□□ -0.86
SMAD3-208ENST00000558827 VKORC1L1Q8N0U8 176 aa9.68□□□□□ -0.86
SMAD3-208ENST00000558827 TSPAN14Q8NG11 270 aa9.68□□□□□ -0.86
SMAD3-208ENST00000558827 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.68□□□□□ -0.867e-8■■■■□ 19.9
SMAD3-208ENST00000558827 SPATA2Q9UM82 520 aa9.68□□□□□ -0.86
SMAD3-208ENST00000558827 OR2W1Q9Y3N9 320 aa9.68□□□□□ -0.86
SMAD3-208ENST00000558827 LINC01619G3V211 115 aa9.67□□□□□ -0.86
SMAD3-208ENST00000558827 OVOL1O14753 267 aa9.67□□□□□ -0.86
SMAD3-208ENST00000558827 TNFSF12O43508 249 aa9.67□□□□□ -0.86
SMAD3-208ENST00000558827 AIREO43918 545 aa9.67□□□□□ -0.86
SMAD3-208ENST00000558827 LGALS1P09382 135 aaKnown RBP9.67□□□□□ -0.86
SMAD3-208ENST00000558827 OR8U8P0C7N1 319 aa9.67□□□□□ -0.86
SMAD3-208ENST00000558827 LGALS7P47929 136 aa9.67□□□□□ -0.86
SMAD3-208ENST00000558827 ARPC4P59998 168 aa9.67□□□□□ -0.86
SMAD3-208ENST00000558827 PITPNAQ00169 270 aa9.67□□□□□ -0.86
SMAD3-208ENST00000558827 SRSF7Q16629 238 aaKnown RBP eCLIP9.67□□□□□ -0.86
SMAD3-208ENST00000558827 MRGPRG-AS1Q2M3A8 158 aa9.67□□□□□ -0.86
SMAD3-208ENST00000558827 AKIRIN2Q53H80 203 aa9.67□□□□□ -0.86
SMAD3-208ENST00000558827 CNIH2Q6PI25 160 aa9.67□□□□□ -0.86
SMAD3-208ENST00000558827 ACOT12Q8WYK0 555 aa9.67□□□□□ -0.86
SMAD3-208ENST00000558827 DDB2Q92466 427 aa9.67□□□□□ -0.86
SMAD3-208ENST00000558827 YIPF6Q96EC8 236 aa9.67□□□□□ -0.86
SMAD3-208ENST00000558827 PHB2Q99623 299 aa9.67□□□□□ -0.86
SMAD3-208ENST00000558827 ASCL2Q99929 193 aa9.67□□□□□ -0.86
SMAD3-208ENST00000558827 TAS2R8Q9NYW2 309 aa9.67□□□□□ -0.86
SMAD3-208ENST00000558827 ANXA10Q9UJ72 324 aa9.67□□□□□ -0.86
SMAD3-208ENST00000558827 RBMX2Q9Y388 322 aaKnown RBP9.67□□□□□ -0.86
SMAD3-208ENST00000558827 A0A087WXM4 84 aa9.66□□□□□ -0.86
SMAD3-208ENST00000558827 MSGN1A6NI15 193 aa9.66□□□□□ -0.86
SMAD3-208ENST00000558827 SAP30O75446 220 aa9.66□□□□□ -0.86
SMAD3-208ENST00000558827 HLA-DQB1P01920 261 aa9.66□□□□□ -0.86
SMAD3-208ENST00000558827 PRH1P02810 166 aa9.66□□□□□ -0.86
SMAD3-208ENST00000558827 AADACP22760 399 aa9.66□□□□□ -0.86
SMAD3-208ENST00000558827 CD40LGP29965 261 aa9.66□□□□□ -0.86
SMAD3-208ENST00000558827 FCGR2CP31995 323 aa9.66□□□□□ -0.86
SMAD3-208ENST00000558827 FXYD4P59646 89 aa9.66□□□□□ -0.86
SMAD3-208ENST00000558827 RUNX1Q01196 453 aa9.66□□□□□ -0.86
SMAD3-208ENST00000558827 CD69Q07108 199 aa9.66□□□□□ -0.86
SMAD3-208ENST00000558827 VMA21Q3ZAQ7 101 aa9.66□□□□□ -0.86
SMAD3-208ENST00000558827 C10orf55Q5SWW7 151 aa9.66□□□□□ -0.86
SMAD3-208ENST00000558827 ZNF645Q8N7E2 425 aa9.66□□□□□ -0.86
SMAD3-208ENST00000558827 TCTEX1D1Q8N7M0 179 aa9.66□□□□□ -0.86
SMAD3-208ENST00000558827 POC5Q8NA72 575 aa9.66□□□□□ -0.86
SMAD3-208ENST00000558827 BEST4Q8NFU0 473 aa9.66□□□□□ -0.86
SMAD3-208ENST00000558827 SECTM1Q8WVN6 248 aa9.66□□□□□ -0.86
SMAD3-208ENST00000558827 TCTEX1D2Q8WW35 142 aa9.66□□□□□ -0.86
SMAD3-208ENST00000558827 ADTRPQ96IZ2 230 aa9.66□□□□□ -0.86
SMAD3-208ENST00000558827 RHOVQ96L33 236 aa9.66□□□□□ -0.86
SMAD3-208ENST00000558827 DCSTAMPQ9H295 470 aa9.66□□□□□ -0.86
SMAD3-208ENST00000558827 AUNIPQ9H7T9 357 aa9.66□□□□□ -0.86
SMAD3-208ENST00000558827 CCL28Q9NRJ3 127 aa9.66□□□□□ -0.86
SMAD3-208ENST00000558827 COA4Q9NYJ1 87 aa9.66□□□□□ -0.86
SMAD3-208ENST00000558827 ETV7Q9Y603 341 aa9.66□□□□□ -0.86
SMAD3-208ENST00000558827 COL7A1Q02388 2944 aa9.66□□□□□ -0.86
SMAD3-208ENST00000558827 C13orf42A0A1B0GVH6 325 aa9.65□□□□□ -0.86
SMAD3-208ENST00000558827 MPPED1O15442 326 aa9.65□□□□□ -0.86
SMAD3-208ENST00000558827 RBMXL2O75526 392 aaKnown RBP9.65□□□□□ -0.86
SMAD3-208ENST00000558827 DIRAS3O95661 229 aa9.65□□□□□ -0.86
SMAD3-208ENST00000558827 IGLV2-14P01704 120 aa9.65□□□□□ -0.86
SMAD3-208ENST00000558827 HSPB1P04792 205 aaKnown RBP9.65□□□□□ -0.86
SMAD3-208ENST00000558827 CTXN2P0C2S0 81 aa9.65□□□□□ -0.86
SMAD3-208ENST00000558827 SAA1P0DJI8 122 aaPredicted RBP9.65□□□□□ -0.86
SMAD3-208ENST00000558827 RRASP10301 218 aa9.65□□□□□ -0.86
SMAD3-208ENST00000558827 MYOD1P15172 320 aa9.65□□□□□ -0.86
SMAD3-208ENST00000558827 PRSS8Q16651 343 aa9.65□□□□□ -0.86
SMAD3-208ENST00000558827 C19orf35Q6ZS72 473 aa9.65□□□□□ -0.86
SMAD3-208ENST00000558827 KCTD9Q7L273 389 aa9.65□□□□□ -0.86
SMAD3-208ENST00000558827 SSX9Q7RTT3 188 aa9.65□□□□□ -0.86
SMAD3-208ENST00000558827 ZNF430Q9H8G1 570 aaPredicted RBP9.65□□□□□ -0.86
SMAD3-208ENST00000558827 DIABLOQ9NR28 239 aa9.65□□□□□ -0.86
SMAD3-208ENST00000558827 ADAM30Q9UKF2 790 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms