RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 SNURFLB1AK76 121 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 APCSP02743 223 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 MINOS1Q5TGZ0 78 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 SLC50A1Q9BRV3 221 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 TCF19Q9Y242 345 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 MINOS1-NBL1R4GNA1 71 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 MCM3APO60318 1980 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 TRBV9A0A0B4J1U6 114 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 KBTBD11-OT1A0A1B0GTJ5 212 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 LEPP41159 167 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 RPS11P62280 158 aaKnown RBP eCLIP10.2□□□□□ -0.78
NEK9-210ENST00000557026 VAMP3Q15836 100 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 FOCADQ5VW36 1801 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 CD99P14209 185 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 CX3CL1P78423 397 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 KCNS1Q96KK3 526 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 NRXN2Q9P2S2 1712 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 TRIP11Q15643 1979 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 PSMB2P49721 201 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 FAM3BP58499 235 aaPredicted RBP10.2□□□□□ -0.78
NEK9-210ENST00000557026 SPINK9Q5DT21 86 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 LYZL2Q7Z4W2 148 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 C8orf46Q8TAG6 207 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 PSMG3Q9BT73 122 aaPredicted RBP10.2□□□□□ -0.78
NEK9-210ENST00000557026 MAP1LC3AQ9H492 121 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 SOX21Q9Y651 276 aaPredicted RBP10.2□□□□□ -0.78
NEK9-210ENST00000557026 TRAV20A0A0B4J274 112 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 MARCH11A6NNE9 402 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 AP4M1O00189 453 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 SMAD7O15105 426 aaKnown RBP10.2□□□□□ -0.78
NEK9-210ENST00000557026 IGHV3-13P01766 116 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 IGHV3-7P01780 117 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 ANOS1P23352 680 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 DMRTC1Q5HYR2 192 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 OVCH2Q7RTZ1 564 aa10.2□□□□□ -0.78
NEK9-210ENST00000557026 KIAA1217Q5T5P2 1943 aa10.19□□□□□ -0.78
NEK9-210ENST00000557026 PAGE4O60829 102 aa10.19□□□□□ -0.78
NEK9-210ENST00000557026 BCL2P10415 239 aa10.19□□□□□ -0.78
NEK9-210ENST00000557026 GPX4P36969 197 aaPredicted RBP10.19□□□□□ -0.78
NEK9-210ENST00000557026 FGFRL1Q8N441 504 aa10.19□□□□□ -0.78
NEK9-210ENST00000557026 PARD6AQ9NPB6 346 aa10.19□□□□□ -0.78
NEK9-210ENST00000557026 CBY1Q9Y3M2 126 aa10.19□□□□□ -0.78
NEK9-210ENST00000557026 FAM90A9PA6NNJ1 464 aa10.19□□□□□ -0.78
NEK9-210ENST00000557026 NPIPB9F8W1W9 429 aa10.19□□□□□ -0.78
NEK9-210ENST00000557026 HTN1P15515 57 aa10.19□□□□□ -0.78
NEK9-210ENST00000557026 PRNTQ86SH4 94 aa10.19□□□□□ -0.78
NEK9-210ENST00000557026 FAM169BQ8N8A8 192 aa10.19□□□□□ -0.78
NEK9-210ENST00000557026 OR5AU1Q8NGC0 362 aa10.19□□□□□ -0.78
NEK9-210ENST00000557026 ARPC1AQ92747 370 aa10.19□□□□□ -0.78
NEK9-210ENST00000557026 TM2D1Q9BX74 207 aa10.19□□□□□ -0.78
NEK9-210ENST00000557026 OR51M1Q9H341 326 aa10.19□□□□□ -0.78
NEK9-210ENST00000557026 BET1LQ9NYM9 111 aa10.19□□□□□ -0.78
NEK9-210ENST00000557026 B4DSR2 109 aa10.19□□□□□ -0.78
NEK9-210ENST00000557026 LDLRAD3Q86YD5 345 aa10.19□□□□□ -0.78
NEK9-210ENST00000557026 SIGLEC12Q96PQ1 595 aa10.19□□□□□ -0.78
NEK9-210ENST00000557026 NIT2Q9NQR4 276 aa10.19□□□□□ -0.78
NEK9-210ENST00000557026 BRWD3Q6RI45 1802 aa10.19□□□□□ -0.78
NEK9-210ENST00000557026 RBFOX2O43251 390 aaKnown RBP eCLIP10.19□□□□□ -0.78
NEK9-210ENST00000557026 MVDP53602 400 aa10.19□□□□□ -0.78
NEK9-210ENST00000557026 TNFRSF9Q07011 255 aa10.19□□□□□ -0.78
NEK9-210ENST00000557026 RNF114Q9Y508 228 aa10.19□□□□□ -0.78
NEK9-210ENST00000557026 NPFFO15130 113 aa10.18□□□□□ -0.78
NEK9-210ENST00000557026 FCGR2BP31994 310 aaPredicted RBP10.18□□□□□ -0.78
NEK9-210ENST00000557026 SRSF9Q13242 221 aaKnown RBP eCLIP10.18□□□□□ -0.78
NEK9-210ENST00000557026 VWA1Q6PCB0 445 aa10.18□□□□□ -0.78
NEK9-210ENST00000557026 SPRED2Q7Z698 418 aa10.18□□□□□ -0.78
NEK9-210ENST00000557026 OR4B1Q8NGF8 309 aa10.18□□□□□ -0.78
NEK9-210ENST00000557026 OR13A1Q8NGR1 328 aa10.18□□□□□ -0.78
NEK9-210ENST00000557026 SPSB4Q96A44 273 aa10.18□□□□□ -0.78
NEK9-210ENST00000557026 RBKSQ9H477 322 aa10.18□□□□□ -0.78
NEK9-210ENST00000557026 IGKV3D-15A0A087WSY6 115 aa10.18□□□□□ -0.78
NEK9-210ENST00000557026 M0R3E3 92 aa10.18□□□□□ -0.78
NEK9-210ENST00000557026 HSPB1P04792 205 aaKnown RBP10.18□□□□□ -0.78
NEK9-210ENST00000557026 ZNF137PP52743 207 aa10.18□□□□□ -0.78
NEK9-210ENST00000557026 LY6EQ16553 131 aa10.18□□□□□ -0.78
NEK9-210ENST00000557026 PVRIGQ6DKI7 326 aa10.18□□□□□ -0.78
NEK9-210ENST00000557026 TOMM20LQ6UXN7 152 aa10.18□□□□□ -0.78
NEK9-210ENST00000557026 TMEM91Q6ZNR0 172 aa10.18□□□□□ -0.78
NEK9-210ENST00000557026 TMEM252Q8N6L7 170 aa10.18□□□□□ -0.78
NEK9-210ENST00000557026 TMEM37Q8WXS4 190 aa10.18□□□□□ -0.78
NEK9-210ENST00000557026 MS4A3Q96HJ5 214 aa10.18□□□□□ -0.78
NEK9-210ENST00000557026 C21orf62Q9NYP8 219 aa10.18□□□□□ -0.78
NEK9-210ENST00000557026 MAP1BP46821 2468 aaKnown RBP10.18□□□□□ -0.78
NEK9-210ENST00000557026 IGKV3-7A0A075B6H7 116 aa10.18□□□□□ -0.78
NEK9-210ENST00000557026 SLC25A28Q96A46 364 aa10.18□□□□□ -0.78
NEK9-210ENST00000557026 REPIN1Q9BWE0 567 aaKnown RBP10.18□□□□□ -0.78
NEK9-210ENST00000557026 TMEM14DPA8MWL7 114 aa10.17□□□□□ -0.78
NEK9-210ENST00000557026 TCTAP57738 103 aa10.17□□□□□ -0.78
NEK9-210ENST00000557026 TEX45Q8NA69 505 aa10.17□□□□□ -0.78
NEK9-210ENST00000557026 TAF15Q92804 592 aaKnown RBP eCLIP10.17□□□□□ -0.78
NEK9-210ENST00000557026 ZNF488Q96MN9 340 aa10.17□□□□□ -0.78
NEK9-210ENST00000557026 ERVH48-1M5A8F1 160 aa10.17□□□□□ -0.78
NEK9-210ENST00000557026 ZIC3O60481 467 aa10.17□□□□□ -0.78
NEK9-210ENST00000557026 GGCTO75223 188 aaKnown RBP10.17□□□□□ -0.78
NEK9-210ENST00000557026 LINC00271P0C7V0 271 aa10.17□□□□□ -0.78
NEK9-210ENST00000557026 ATP6V0CP27449 155 aa10.17□□□□□ -0.78
NEK9-210ENST00000557026 FAM27E3Q08E93 113 aa10.17□□□□□ -0.78
NEK9-210ENST00000557026 MESP2Q0VG99 397 aa10.17□□□□□ -0.78
NEK9-210ENST00000557026 GTSCR1Q86UQ5 136 aa10.17□□□□□ -0.78
NEK9-210ENST00000557026 TLNRD1Q9H1K6 362 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms