RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 FAM231CP0DMU5 169 aa2.09□□□□□ -2.07
SYNE2-210ENST00000553455 CDK9P50750 372 aaKnown RBP2.09□□□□□ -2.07
SYNE2-210ENST00000553455 BLVRAP53004 296 aa2.09□□□□□ -2.07
SYNE2-210ENST00000553455 CTBP2P56545 445 aa2.09□□□□□ -2.07
SYNE2-210ENST00000553455 KRTAP12-1P59990 96 aa2.09□□□□□ -2.07
SYNE2-210ENST00000553455 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.09□□□□□ -2.07
SYNE2-210ENST00000553455 CCDC121Q6ZUS5 278 aa2.09□□□□□ -2.07
SYNE2-210ENST00000553455 OR11H2Q8NH07 326 aa2.09□□□□□ -2.07
SYNE2-210ENST00000553455 DNAJC30Q96LL9 226 aa2.09□□□□□ -2.07
SYNE2-210ENST00000553455 OR52B2Q96RD2 323 aa2.09□□□□□ -2.07
SYNE2-210ENST00000553455 TMEM109Q9BVC6 243 aa2.09□□□□□ -2.07
SYNE2-210ENST00000553455 PECRQ9BY49 303 aa2.09□□□□□ -2.07
SYNE2-210ENST00000553455 MAP1LC3AQ9H492 121 aa2.09□□□□□ -2.07
SYNE2-210ENST00000553455 HES4Q9HCC6 221 aa2.09□□□□□ -2.07
SYNE2-210ENST00000553455 ARHGAP32A7KAX9 2087 aa2.09□□□□□ -2.07
SYNE2-210ENST00000553455 IQGAP2Q13576 1575 aa2.09□□□□□ -2.08
SYNE2-210ENST00000553455 KIF21BO75037 1637 aa2.09□□□□□ -2.08
SYNE2-210ENST00000553455 ATP10BO94823 1461 aa2.08□□□□□ -2.08
SYNE2-210ENST00000553455 ABCA8O94911 1581 aa2.08□□□□□ -2.08
SYNE2-210ENST00000553455 SAMD9Q5K651 1589 aa2.08□□□□□ -2.08
SYNE2-210ENST00000553455 UBFD1O14562 309 aaKnown RBP2.08□□□□□ -2.08
SYNE2-210ENST00000553455 PFDN6O15212 129 aa2.08□□□□□ -2.08
SYNE2-210ENST00000553455 SSNA1O43805 119 aa2.08□□□□□ -2.08
SYNE2-210ENST00000553455 IGHV1-69P01742 117 aa2.08□□□□□ -2.08
SYNE2-210ENST00000553455 LGALS9BQ3B8N2 356 aa2.08□□□□□ -2.08
SYNE2-210ENST00000553455 TNFAIP8L2Q6P589 184 aaPredicted RBP2.08□□□□□ -2.08
SYNE2-210ENST00000553455 SPATA12Q7Z6I5 190 aa2.08□□□□□ -2.08
SYNE2-210ENST00000553455 IQCF2Q8IXL9 164 aa2.08□□□□□ -2.08
SYNE2-210ENST00000553455 DAND5Q8N907 189 aa2.08□□□□□ -2.08
SYNE2-210ENST00000553455 CNEP1R1Q8N9A8 125 aa2.08□□□□□ -2.08
SYNE2-210ENST00000553455 TTTY12Q9BZ98 90 aa2.08□□□□□ -2.08
SYNE2-210ENST00000553455 CXCL16Q9H2A7 254 aa2.08□□□□□ -2.08
SYNE2-210ENST00000553455 NKIRAS1Q9NYS0 192 aa2.08□□□□□ -2.08
SYNE2-210ENST00000553455 KLK5Q9Y337 293 aaPredicted RBP2.08□□□□□ -2.08
SYNE2-210ENST00000553455 MAGI3Q5TCQ9 1506 aa2.07□□□□□ -2.08
SYNE2-210ENST00000553455 KIAA0556O60303 1618 aa2.07□□□□□ -2.08
SYNE2-210ENST00000553455 ADCY10Q96PN6 1610 aa2.07□□□□□ -2.08
SYNE2-210ENST00000553455 MPDZO75970 2070 aa2.07□□□□□ -2.08
SYNE2-210ENST00000553455 A0A1W2PQL4 384 aaPredicted RBP2.07□□□□□ -2.08
SYNE2-210ENST00000553455 OR6C6A6NF89 314 aa2.07□□□□□ -2.08
SYNE2-210ENST00000553455 C11orf86A6NJI1 115 aa2.07□□□□□ -2.08
SYNE2-210ENST00000553455 H0Y980 276 aa2.07□□□□□ -2.08
SYNE2-210ENST00000553455 LY6LH3BQJ8 138 aa2.07□□□□□ -2.08
SYNE2-210ENST00000553455 DEXIO95424 95 aa2.07□□□□□ -2.08
SYNE2-210ENST00000553455 REG1AP05451 166 aa2.07□□□□□ -2.08
SYNE2-210ENST00000553455 MAGEA2P43356 314 aa2.07□□□□□ -2.08
SYNE2-210ENST00000553455 CDC34P49427 236 aaPredicted RBP2.07□□□□□ -2.08
SYNE2-210ENST00000553455 CDKL4Q5MAI5 379 aa2.07□□□□□ -2.08
SYNE2-210ENST00000553455 SAPCD1Q5SSQ6 148 aa2.07□□□□□ -2.08
SYNE2-210ENST00000553455 N4BP2L1Q5TBK1 243 aaPredicted RBP2.07□□□□□ -2.08
SYNE2-210ENST00000553455 KRTAP5-7Q6L8G8 165 aa2.07□□□□□ -2.08
SYNE2-210ENST00000553455 PACRGLQ8N7B6 248 aa2.07□□□□□ -2.08
SYNE2-210ENST00000553455 TMEM161BQ8NDZ6 487 aa2.07□□□□□ -2.08
SYNE2-210ENST00000553455 RPS4Y2Q8TD47 263 aa2.07□□□□□ -2.08
SYNE2-210ENST00000553455 NOSIPQ9Y314 301 aaKnown RBP2.07□□□□□ -2.08
SYNE2-210ENST00000553455 KIF13AQ9H1H9 1805 aa2.07□□□□□ -2.08
SYNE2-210ENST00000553455 NAV1Q8NEY1 1877 aa2.07□□□□□ -2.08
SYNE2-210ENST00000553455 EFCAB5A4FU69 1503 aa2.07□□□□□ -2.08
SYNE2-210ENST00000553455 EPRSP07814 1512 aaKnown RBP2.07□□□□□ -2.08
SYNE2-210ENST00000553455 CTTNBP2Q8WZ74 1663 aa2.06□□□□□ -2.08
SYNE2-210ENST00000553455 COL4A2P08572 1712 aa2.06□□□□□ -2.08
SYNE2-210ENST00000553455 FNDC10F2Z333 226 aa2.06□□□□□ -2.08
SYNE2-210ENST00000553455 M0QZ92 97 aa2.06□□□□□ -2.08
SYNE2-210ENST00000553455 CXCR6O00574 342 aa2.06□□□□□ -2.08
SYNE2-210ENST00000553455 GNRH2O43555 120 aa2.06□□□□□ -2.08
SYNE2-210ENST00000553455 NDUFB2O95178 105 aa2.06□□□□□ -2.08
SYNE2-210ENST00000553455 IL3P08700 152 aa2.06□□□□□ -2.08
SYNE2-210ENST00000553455 OCM2P0CE71 109 aa2.06□□□□□ -2.08
SYNE2-210ENST00000553455 SFRP2Q96HF1 295 aa2.06□□□□□ -2.08
SYNE2-210ENST00000553455 ANKRD36BP1Q96IX9 119 aa2.06□□□□□ -2.08
SYNE2-210ENST00000553455 Q9BRP9 147 aa2.06□□□□□ -2.08
SYNE2-210ENST00000553455 DKKL1Q9UK85 242 aa2.06□□□□□ -2.08
SYNE2-210ENST00000553455 POLR1DQ9Y2S0 133 aa2.06□□□□□ -2.08
SYNE2-210ENST00000553455 FAM215AQ9Y5M1 114 aa2.06□□□□□ -2.08
SYNE2-210ENST00000553455 ABCC11Q96J66 1382 aa2.06□□□□□ -2.08
SYNE2-210ENST00000553455 FMN1Q68DA7 1419 aa2.06□□□□□ -2.08
SYNE2-210ENST00000553455 CASKIN1Q8WXD9 1431 aa2.06□□□□□ -2.08
SYNE2-210ENST00000553455 ARHGAP35Q9NRY4 1499 aa2.06□□□□□ -2.08
SYNE2-210ENST00000553455 DIP2BQ9P265 1576 aa2.06□□□□□ -2.08
SYNE2-210ENST00000553455 BAHCC1Q9P281 2608 aa2.05□□□□□ -2.08
SYNE2-210ENST00000553455 TMEM235A6NFC5 223 aa2.05□□□□□ -2.08
SYNE2-210ENST00000553455 UBE2L6O14933 153 aa2.05□□□□□ -2.08
SYNE2-210ENST00000553455 HLA-DQB2P05538 268 aa2.05□□□□□ -2.08
SYNE2-210ENST00000553455 ZNF728P0DKX0 622 aa2.05□□□□□ -2.08
SYNE2-210ENST00000553455 DDTP30046 118 aa2.05□□□□□ -2.08
SYNE2-210ENST00000553455 XCL1P47992 114 aa2.05□□□□□ -2.08
SYNE2-210ENST00000553455 RBM11P57052 281 aaKnown RBP2.05□□□□□ -2.08
SYNE2-210ENST00000553455 BTN3A2P78410 334 aa2.05□□□□□ -2.08
SYNE2-210ENST00000553455 DEFB103AP81534 67 aa2.05□□□□□ -2.08
SYNE2-210ENST00000553455 HOXC5Q00444 222 aa2.05□□□□□ -2.08
SYNE2-210ENST00000553455 PCOTHQ58A44 107 aa2.05□□□□□ -2.08
SYNE2-210ENST00000553455 COMMD7Q86VX2 200 aa2.05□□□□□ -2.08
SYNE2-210ENST00000553455 GPHB5Q86YW7 130 aa2.05□□□□□ -2.08
SYNE2-210ENST00000553455 CLDND2Q8NHS1 167 aa2.05□□□□□ -2.08
SYNE2-210ENST00000553455 FGF13Q92913 245 aa2.05□□□□□ -2.08
SYNE2-210ENST00000553455 SLC35G5Q96KT7 338 aa2.05□□□□□ -2.08
SYNE2-210ENST00000553455 TMEM106BQ9NUM4 274 aa2.05□□□□□ -2.08
SYNE2-210ENST00000553455 USE1Q9NZ43 259 aa2.05□□□□□ -2.08
SYNE2-210ENST00000553455 CD109Q6YHK3 1445 aa2.05□□□□□ -2.08
SYNE2-210ENST00000553455 NEO1Q92859 1461 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms