RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 OR6C3Q9NZP0 311 aa10.72□□□□□ -0.69
VPS52-218ENST00000482399 OR5B21A6NL26 309 aa10.72□□□□□ -0.69
VPS52-218ENST00000482399 AGFG2O95081 481 aa10.72□□□□□ -0.69
VPS52-218ENST00000482399 HAND1O96004 215 aa10.72□□□□□ -0.69
VPS52-218ENST00000482399 GCGP01275 180 aa10.72□□□□□ -0.69
VPS52-218ENST00000482399 HBZP02008 142 aa10.72□□□□□ -0.69
VPS52-218ENST00000482399 GPR12P47775 334 aa10.72□□□□□ -0.69
VPS52-218ENST00000482399 FOXL2NBQ6ZUU3 175 aa10.72□□□□□ -0.69
VPS52-218ENST00000482399 DEFB108BQ8NET1 73 aa10.72□□□□□ -0.69
VPS52-218ENST00000482399 NANOS1Q8WY41 292 aaKnown RBP10.72□□□□□ -0.69
VPS52-218ENST00000482399 VAMP8Q9BV40 100 aa10.72□□□□□ -0.69
VPS52-218ENST00000482399 NAT8BQ9UHF3 227 aa10.72□□□□□ -0.69
VPS52-218ENST00000482399 ARL14EPLP0DKL9 152 aa10.71□□□□□ -0.69
VPS52-218ENST00000482399 COL8A2P25067 703 aa10.71□□□□□ -0.69
VPS52-218ENST00000482399 LMO1P25800 156 aa10.71□□□□□ -0.69
VPS52-218ENST00000482399 B3GALT5-AS1P59052 145 aa10.71□□□□□ -0.69
VPS52-218ENST00000482399 ZFP36L1Q07352 338 aaKnown RBP10.71□□□□□ -0.69
VPS52-218ENST00000482399 ATOH7Q8N100 152 aa10.71□□□□□ -0.69
VPS52-218ENST00000482399 OR10G8Q8NGN5 311 aa10.71□□□□□ -0.69
VPS52-218ENST00000482399 ANAPC16Q96DE5 110 aa10.71□□□□□ -0.69
VPS52-218ENST00000482399 SPTBN1Q01082 2364 aaKnown RBP10.71□□□□□ -0.69
VPS52-218ENST00000482399 DSPP15924 2871 aaKnown RBP10.71□□□□□ -0.69
VPS52-218ENST00000482399 A8MXE2 369 aa10.71□□□□□ -0.69
VPS52-218ENST00000482399 SNURFLB1AK76 121 aa10.71□□□□□ -0.69
VPS52-218ENST00000482399 OR7C2O60412 319 aa10.71□□□□□ -0.69
VPS52-218ENST00000482399 MRPL54Q6P161 138 aaKnown RBP10.71□□□□□ -0.69
VPS52-218ENST00000482399 OR5R1Q8NH85 324 aa10.71□□□□□ -0.69
VPS52-218ENST00000482399 SLC25A40Q8TBP6 338 aa10.71□□□□□ -0.69
VPS52-218ENST00000482399 CT55Q8WUE5 264 aa10.71□□□□□ -0.69
VPS52-218ENST00000482399 SNHG12Q9BXW3 62 aa10.71□□□□□ -0.69
VPS52-218ENST00000482399 HIPK2Q9H2X6 1198 aa10.71□□□□□ -0.69
VPS52-218ENST00000482399 RPH3ALQ9UNE2 315 aa10.71□□□□□ -0.69
VPS52-218ENST00000482399 LOXL2Q9Y4K0 774 aa10.71□□□□□ -0.69
VPS52-218ENST00000482399 MPC1Q9Y5U8 109 aa10.71□□□□□ -0.69
VPS52-218ENST00000482399 CACNA1BQ00975 2339 aa10.71□□□□□ -0.69
VPS52-218ENST00000482399 TRAV1-1A0A0B4J248 108 aa10.71□□□□□ -0.7
VPS52-218ENST00000482399 SCO2A0A1W2PP80 73 aa10.71□□□□□ -0.7
VPS52-218ENST00000482399 TMEM30CPA0ZSE6 113 aa10.71□□□□□ -0.7
VPS52-218ENST00000482399 BTF3P20290 206 aaKnown RBP10.71□□□□□ -0.7
VPS52-218ENST00000482399 CD1BP29016 333 aa10.71□□□□□ -0.7
VPS52-218ENST00000482399 MAS1LP35410 378 aa10.71□□□□□ -0.7
VPS52-218ENST00000482399 SPCS3P61009 180 aa10.71□□□□□ -0.7
VPS52-218ENST00000482399 FXYD3Q14802 87 aa10.71□□□□□ -0.7
VPS52-218ENST00000482399 SIGLECL1Q8N7X8 197 aa10.71□□□□□ -0.7
VPS52-218ENST00000482399 TMEM170AQ8WVE7 144 aa10.71□□□□□ -0.7
VPS52-218ENST00000482399 UHRF2Q96PU4 802 aa10.71□□□□□ -0.7
VPS52-218ENST00000482399 C11orf1Q9H5F2 150 aa10.71□□□□□ -0.7
VPS52-218ENST00000482399 LRRC30A6NM36 301 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 C12orf77C9JDV5 145 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 AMTP48728 403 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 DUSP3P51452 185 aaPredicted RBP10.7□□□□□ -0.7
VPS52-218ENST00000482399 Q0VFX4 171 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 C6orf15Q6UXA7 325 aaPredicted RBP10.7□□□□□ -0.7
VPS52-218ENST00000482399 PPP1R32Q7Z5V6 425 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 LSM10Q969L4 123 aaKnown RBP10.7□□□□□ -0.7
VPS52-218ENST00000482399 R3HDM4Q96D70 268 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 WDYHV1Q96HA8 205 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 ACY3Q96HD9 319 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 QTRT1Q9BXR0 403 aaKnown RBP10.7□□□□□ -0.7
VPS52-218ENST00000482399 LRP4O75096 1905 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 FAM90A10PA6NDY2 464 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 FAM90A18PA6NE21 464 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 FAM90A16PA6NEW6 464 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 FAM90A20PA6NIJ5 464 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 FAM90A8PA6NJQ4 464 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 FAM90A7PA6NKC0 464 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 FAM90A22PA8MWA6 464 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 FAM90A12PA8MX19 464 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 FAM90A5PA8MXJ8 464 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 FAM90A23PA8MXZ1 464 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 TMEM250H0YL14 139 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 PSPNO60542 156 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 FAM90A15PP0C7V4 464 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 FAM90A13PP0C7W8 464 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 FAM90A14PP0C7W9 464 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 FAM90A24PP0C7X0 464 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 ZNF295-AS1Q8N0V1 137 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 ZNF114Q8NC26 417 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 OR2M7Q8NG81 312 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 OR4P4Q8NGL7 312 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 SEMA5BQ9P283 1151 aa10.7□□□□□ -0.7
VPS52-218ENST00000482399 NUPR1O60356 82 aa10.69□□□□□ -0.7
VPS52-218ENST00000482399 HPRT1P00492 218 aa10.69□□□□□ -0.7
VPS52-218ENST00000482399 CCKARP32238 428 aa10.69□□□□□ -0.7
VPS52-218ENST00000482399 PCP4P48539 62 aa10.69□□□□□ -0.7
VPS52-218ENST00000482399 TPPP2P59282 170 aa10.69□□□□□ -0.7
VPS52-218ENST00000482399 ASPHD1Q5U4P2 390 aa10.69□□□□□ -0.7
VPS52-218ENST00000482399 PRR27Q6MZM9 219 aa10.69□□□□□ -0.7
VPS52-218ENST00000482399 PCED1AQ9H1Q7 454 aa10.69□□□□□ -0.7
VPS52-218ENST00000482399 TMEM242Q9NWH2 141 aa10.69□□□□□ -0.7
VPS52-218ENST00000482399 MARCH11A6NNE9 402 aa10.69□□□□□ -0.7
VPS52-218ENST00000482399 DNPH1O43598 174 aa10.69□□□□□ -0.7
VPS52-218ENST00000482399 CER1O95813 267 aa10.69□□□□□ -0.7
VPS52-218ENST00000482399 CISD2Q8N5K1 135 aaKnown RBP10.69□□□□□ -0.7
VPS52-218ENST00000482399 NHLRC2Q8NBF2 726 aa10.69□□□□□ -0.7
VPS52-218ENST00000482399 POM121L2Q96KW2 1035 aa10.69□□□□□ -0.7
VPS52-218ENST00000482399 CIB3Q96Q77 187 aaPredicted RBP10.69□□□□□ -0.7
VPS52-218ENST00000482399 LRFN3Q9BTN0 628 aa10.69□□□□□ -0.7
VPS52-218ENST00000482399 PPIAL4AQ9Y536 164 aa10.69□□□□□ -0.7
VPS52-218ENST00000482399 B4E171 279 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms