RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 SH3BGRL3Q9H299 93 aa16.28■□□□□ 0.2
PDLIM5-205ENST00000380180 RBMXL2O75526 392 aaKnown RBP16.27■□□□□ 0.2
PDLIM5-205ENST00000380180 MED6O75586 246 aa16.27■□□□□ 0.2
PDLIM5-205ENST00000380180 FSTL3O95633 263 aa16.27■□□□□ 0.2
PDLIM5-205ENST00000380180 OR9G9P0C7N8 305 aa16.27■□□□□ 0.2
PDLIM5-205ENST00000380180 THBS3P49746 956 aa16.27■□□□□ 0.2
PDLIM5-205ENST00000380180 SSX9Q7RTT3 188 aa16.27■□□□□ 0.2
PDLIM5-205ENST00000380180 VKORC1L1Q8N0U8 176 aa16.27■□□□□ 0.2
PDLIM5-205ENST00000380180 ZNF383Q8NA42 475 aa16.27■□□□□ 0.2
PDLIM5-205ENST00000380180 A0A1W2PPR1 153 aa16.26■□□□□ 0.19
PDLIM5-205ENST00000380180 METTL15P1P0C7V9 234 aa16.26■□□□□ 0.19
PDLIM5-205ENST00000380180 DANCRP0C864 163 aa16.26■□□□□ 0.19
PDLIM5-205ENST00000380180 SPANXN5Q5MJ07 72 aa16.26■□□□□ 0.19
PDLIM5-205ENST00000380180 AVPI1Q5T686 147 aa16.26■□□□□ 0.19
PDLIM5-205ENST00000380180 MARC2Q969Z3 335 aa16.26■□□□□ 0.19
PDLIM5-205ENST00000380180 C19orf84I3L1E1 186 aa16.26■□□□□ 0.19
PDLIM5-205ENST00000380180 NQO2P16083 231 aa16.26■□□□□ 0.19
PDLIM5-205ENST00000380180 DLX6P56179 175 aa16.26■□□□□ 0.19
PDLIM5-205ENST00000380180 TMEM155Q4W5P6 130 aa16.26■□□□□ 0.19
PDLIM5-205ENST00000380180 PXDC1Q5TGL8 231 aa16.26■□□□□ 0.19
PDLIM5-205ENST00000380180 OR4S2Q8NH73 311 aa16.26■□□□□ 0.19
PDLIM5-205ENST00000380180 ADTRPQ96IZ2 230 aa16.26■□□□□ 0.19
PDLIM5-205ENST00000380180 RALYQ9UKM9 306 aaKnown RBP16.26■□□□□ 0.19
PDLIM5-205ENST00000380180 CFAP46Q8IYW2 2715 aa16.25■□□□□ 0.19
PDLIM5-205ENST00000380180 ZNF841Q6ZN19 808 aa16.25■□□□□ 0.19
PDLIM5-205ENST00000380180 LINC00052Q96N35 136 aa16.25■□□□□ 0.19
PDLIM5-205ENST00000380180 ATP5SQ99766 215 aa16.25■□□□□ 0.19
PDLIM5-205ENST00000380180 CRYZL1O95825 349 aa16.24■□□□□ 0.19
PDLIM5-205ENST00000380180 CT45A6P0DMU7 189 aa16.24■□□□□ 0.19
PDLIM5-205ENST00000380180 CT45A5P0DMU8 189 aa16.24■□□□□ 0.19
PDLIM5-205ENST00000380180 CT45A7P0DMV0 189 aa16.24■□□□□ 0.19
PDLIM5-205ENST00000380180 ARL16Q0P5N6 197 aa16.24■□□□□ 0.19
PDLIM5-205ENST00000380180 QTRT1Q9BXR0 403 aaKnown RBP16.24■□□□□ 0.19
PDLIM5-205ENST00000380180 HRH4Q9H3N8 390 aa16.24■□□□□ 0.19
PDLIM5-205ENST00000380180 RFNGQ9Y644 331 aa16.24■□□□□ 0.19
PDLIM5-205ENST00000380180 FAM90A9PA6NNJ1 464 aa16.24■□□□□ 0.19
PDLIM5-205ENST00000380180 ATP6V0CP27449 155 aa16.24■□□□□ 0.19
PDLIM5-205ENST00000380180 ERVK-16P61578 105 aa16.24■□□□□ 0.19
PDLIM5-205ENST00000380180 BLOC1S1P78537 153 aa16.24■□□□□ 0.19
PDLIM5-205ENST00000380180 DTX2Q86UW9 622 aa16.24■□□□□ 0.19
PDLIM5-205ENST00000380180 ZDHHC16Q969W1 377 aa16.24■□□□□ 0.19
PDLIM5-205ENST00000380180 RAB39BQ96DA2 213 aa16.24■□□□□ 0.19
PDLIM5-205ENST00000380180 RBMXL1Q96E39 390 aaKnown RBP16.24■□□□□ 0.19
PDLIM5-205ENST00000380180 TRBV23-1A0A0A0MS06 115 aa16.23■□□□□ 0.19
PDLIM5-205ENST00000380180 OR2B8PP59922 312 aa16.23■□□□□ 0.19
PDLIM5-205ENST00000380180 HAPLN4Q86UW8 402 aa16.23■□□□□ 0.19
PDLIM5-205ENST00000380180 C11orf42Q8N5U0 333 aa16.23■□□□□ 0.19
PDLIM5-205ENST00000380180 DTD1Q8TEA8 209 aa16.23■□□□□ 0.19
PDLIM5-205ENST00000380180 NEU4Q8WWR8 484 aaPredicted RBP16.23■□□□□ 0.19
PDLIM5-205ENST00000380180 DFFBO76075 338 aa16.23■□□□□ 0.19
PDLIM5-205ENST00000380180 SPINK9Q5DT21 86 aa16.23■□□□□ 0.19
PDLIM5-205ENST00000380180 Q6ZRG5 221 aa16.23■□□□□ 0.19
PDLIM5-205ENST00000380180 ZNF833PQ6ZTB9 187 aa16.23■□□□□ 0.19
PDLIM5-205ENST00000380180 OR4A16Q8NH70 328 aa16.23■□□□□ 0.19
PDLIM5-205ENST00000380180 PARP11Q9NR21 331 aa16.23■□□□□ 0.19
PDLIM5-205ENST00000380180 MMP26Q9NRE1 261 aa16.23■□□□□ 0.19
PDLIM5-205ENST00000380180 TMEM140Q9NV12 185 aa16.23■□□□□ 0.19
PDLIM5-205ENST00000380180 ARHGAP32A7KAX9 2087 aa16.22■□□□□ 0.19
PDLIM5-205ENST00000380180 USP24Q9UPU5 2620 aa16.22■□□□□ 0.19
PDLIM5-205ENST00000380180 TRAV3A0A0B4J244 114 aa16.22■□□□□ 0.19
PDLIM5-205ENST00000380180 RAB19A4D1S5 217 aa16.22■□□□□ 0.19
PDLIM5-205ENST00000380180 ZP3P21754 424 aa16.22■□□□□ 0.19
PDLIM5-205ENST00000380180 ARHGDIBP52566 201 aa16.22■□□□□ 0.19
PDLIM5-205ENST00000380180 AARDQ4LEZ3 155 aa16.22■□□□□ 0.19
PDLIM5-205ENST00000380180 TMEM14EPQ6UXP3 125 aa16.22■□□□□ 0.19
PDLIM5-205ENST00000380180 CACFD1Q9UGQ2 172 aa16.22■□□□□ 0.19
PDLIM5-205ENST00000380180 CEBPZOSA8MTT3 80 aa16.21■□□□□ 0.19
PDLIM5-205ENST00000380180 KRBOX1C9JBD0 128 aa16.21■□□□□ 0.19
PDLIM5-205ENST00000380180 J3QR06 171 aa16.21■□□□□ 0.19
PDLIM5-205ENST00000380180 IGHV1-8P0DP01 117 aa16.21■□□□□ 0.19
PDLIM5-205ENST00000380180 RELBQ01201 579 aa16.21■□□□□ 0.19
PDLIM5-205ENST00000380180 OR2G3Q8NGZ4 309 aa16.21■□□□□ 0.19
PDLIM5-205ENST00000380180 RHOVQ96L33 236 aa16.21■□□□□ 0.19
PDLIM5-205ENST00000380180 TNCP24821 2201 aa16.21■□□□□ 0.19
PDLIM5-205ENST00000380180 PPIHO43447 177 aaKnown RBP16.21■□□□□ 0.18
PDLIM5-205ENST00000380180 C1QL1O75973 258 aa16.21■□□□□ 0.18
PDLIM5-205ENST00000380180 IFNA17P01571 189 aa16.21■□□□□ 0.18
PDLIM5-205ENST00000380180 FHITP49789 147 aa16.21■□□□□ 0.18
PDLIM5-205ENST00000380180 HBG1P69891 147 aa16.21■□□□□ 0.18
PDLIM5-205ENST00000380180 HBG2P69892 147 aa16.21■□□□□ 0.18
PDLIM5-205ENST00000380180 BTNL8Q6UX41 500 aa16.21■□□□□ 0.18
PDLIM5-205ENST00000380180 TMEM182Q6ZP80 229 aaPredicted RBP16.21■□□□□ 0.18
PDLIM5-205ENST00000380180 STPG2Q8N412 459 aa16.21■□□□□ 0.18
PDLIM5-205ENST00000380180 C8orf31Q8N9H6 132 aa16.21■□□□□ 0.18
PDLIM5-205ENST00000380180 ZNF596Q8TC21 504 aa16.21■□□□□ 0.18
PDLIM5-205ENST00000380180 CIB3Q96Q77 187 aaPredicted RBP16.21■□□□□ 0.18
PDLIM5-205ENST00000380180 OR4C12Q96R67 309 aa16.21■□□□□ 0.18
PDLIM5-205ENST00000380180 A0A087X0M5 115 aa16.2■□□□□ 0.18
PDLIM5-205ENST00000380180 A0A1B0GX30 115 aa16.2■□□□□ 0.18
PDLIM5-205ENST00000380180 SHOXO15266 292 aa16.2■□□□□ 0.18
PDLIM5-205ENST00000380180 RUNX1Q01196 453 aa16.2■□□□□ 0.18
PDLIM5-205ENST00000380180 TUSC1Q2TAM9 212 aa16.2■□□□□ 0.18
PDLIM5-205ENST00000380180 CCDC28AQ8IWP9 274 aa16.2■□□□□ 0.18
PDLIM5-205ENST00000380180 LINC00311Q8N616 119 aa16.2■□□□□ 0.18
PDLIM5-205ENST00000380180 ZNF525Q8N782 197 aa16.2■□□□□ 0.18
PDLIM5-205ENST00000380180 OR10X1Q8NGY0 326 aa16.2■□□□□ 0.18
PDLIM5-205ENST00000380180 RAB1CQ92928 201 aa16.2■□□□□ 0.18
PDLIM5-205ENST00000380180 TIMD4Q96H15 378 aa16.2■□□□□ 0.18
PDLIM5-205ENST00000380180 SLC35D1Q9NTN3 355 aa16.2■□□□□ 0.18
PDLIM5-205ENST00000380180 MIOXQ9UGB7 285 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms