RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 SLC17A3O00476 420 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 FCN1O00602 326 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 CST7O76096 145 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 SERPINE2P07093 398 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 COL9A1P20849 921 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 SRD5A2P31213 254 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 GNG4P50150 75 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 CLDN17P56750 224 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 PSG4Q00888 419 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 TMEM187Q14656 261 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 Q56UQ5 140 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 CPEB2Q7Z5Q1 589 aaKnown RBP5.62□□□□□ -1.51
ZNF540-201ENST00000316433 OR10AG1Q8NH19 301 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 PECRQ9BY49 303 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 RTN4RQ9BZR6 473 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 COMMD5Q9GZQ3 224 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 PBOV1Q9GZY1 135 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 HRASLS2Q9NWW9 162 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 HSPB8Q9UJY1 196 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 COL27A1Q8IZC6 1860 aaPredicted RBP5.62□□□□□ -1.51
ZNF540-201ENST00000316433 THADAQ6YHU6 1953 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 DOCK9Q9BZ29 2069 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 A0A1W2PR77 199 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 PGPEP1LA6NFU8 196 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 KIAA1324LA8MWY0 1029 aaPredicted RBP5.62□□□□□ -1.51
ZNF540-201ENST00000316433 H3BRM9 83 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 SNAI2O43623 268 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 HLA-DRB1P01911 266 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 VDAC1P21796 283 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 PSMB3P49720 205 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 SRSF6Q13247 344 aaKnown RBP5.62□□□□□ -1.51
ZNF540-201ENST00000316433 SP6Q3SY56 376 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 POM121L1PQ3SYA9 428 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 ZNF324BQ6AW86 544 aaPredicted RBP5.62□□□□□ -1.51
ZNF540-201ENST00000316433 LIAT1Q6ZQX7 453 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 SFTPA1Q8IWL2 248 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 OR4N5Q8IXE1 308 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 RCHY1Q96PM5 261 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 WDR61Q9GZS3 305 aaKnown RBP5.62□□□□□ -1.51
ZNF540-201ENST00000316433 VSIRQ9H7M9 311 aa5.62□□□□□ -1.51
ZNF540-201ENST00000316433 TRAV38-1A0A0B4J264 116 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 LRP5LA4QPB2 252 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 RAD51DO75771 328 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 IGFBP2P18065 325 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 NPY1RP25929 384 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 RPS27P42677 84 aaKnown RBP5.61□□□□□ -1.51
ZNF540-201ENST00000316433 SNU13P55769 128 aaKnown RBP5.61□□□□□ -1.51
ZNF540-201ENST00000316433 YAF2Q8IY57 180 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 OR4F5Q8NH21 305 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 OR5P3Q8WZ94 311 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 PPP1R14AQ96A00 147 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 MSI2Q96DH6 328 aaKnown RBP5.61□□□□□ -1.51
ZNF540-201ENST00000316433 MBD6Q96DN6 1003 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 Q96M66 194 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 ST6GALNAC5Q9BVH7 336 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 QTRT1Q9BXR0 403 aaKnown RBP5.61□□□□□ -1.51
ZNF540-201ENST00000316433 PLA2G2FQ9BZM2 168 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 NXF5Q9H1B4 397 aaKnown RBP5.61□□□□□ -1.51
ZNF540-201ENST00000316433 FAM60AQ9NP50 221 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 SPCS1Q9Y6A9 102 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 TRAV9-1A0A075B6T8 112 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 A0A1B0GX78 115 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 HBZP02008 142 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 NTF3P20783 257 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 TLE1Q04724 770 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 ARFRP1Q13795 201 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 COL9A2Q14055 689 aaPredicted RBP5.61□□□□□ -1.51
ZNF540-201ENST00000316433 TESK1Q15569 626 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 TBR1Q16650 682 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 ZNF841Q6ZN19 808 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 SPATA12Q7Z6I5 190 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 YRDCQ86U90 279 aaKnown RBP5.61□□□□□ -1.51
ZNF540-201ENST00000316433 FAM19A2Q8N3H0 131 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 VSTM2AQ8TAG5 236 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 ZNF524Q96C55 264 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 MS4A5Q9H3V2 200 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 NAA60Q9H7X0 242 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 WDR54Q9H977 334 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 ZNF286AQ9HBT8 521 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 SH2D2AQ9NP31 389 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 KMT2EQ8IZD2 1858 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 A0A087X0K7 114 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 A0A0G2JLM5 398 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 SNURFLB1AK76 121 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 USF1P22415 310 aaPredicted RBP5.61□□□□□ -1.51
ZNF540-201ENST00000316433 MDH2P40926 338 aaKnown RBP5.61□□□□□ -1.51
ZNF540-201ENST00000316433 FABP6P51161 128 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 TMEM50BP56557 158 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 CHRDL2Q6WN34 429 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 ODF3L1Q8IXM7 274 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 TSKUQ8WUA8 353 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 NDFIP1Q9BT67 221 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 VCX2Q9H322 139 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 LHFPL6Q9Y693 200 aa5.61□□□□□ -1.51
ZNF540-201ENST00000316433 LOC102723996A0A087X1L8 192 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 TRBV9A0A0B4J1U6 114 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 A0A1W2PPC4 97 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 SOX1O00570 391 aaPredicted RBP5.6□□□□□ -1.51
ZNF540-201ENST00000316433 SOCS1O15524 211 aa5.6□□□□□ -1.51
ZNF540-201ENST00000316433 SSSCA1O60232 199 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms