RNA–Protein interactions for RNA: ENSMUST00000115657.9

Pcdha11-202, Transcript of Protocadherin alpha 11, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha11, Length 5,360 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11-202ENSMUST00000115657 Scrt2Q8BTH6 311 aa12.85□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Chac2Q9CQG1 178 aa12.85□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Gm21778A0A087WNP8 232 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Klf9O35739 244 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Gpr33O88416 339 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Igsf6P0C6B7 237 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Sf3b6P59708 125 aaKnown RBP12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Prrx1P63013 245 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 UcnP81615 122 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Znf629Q6A085 867 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Gucd1Q8BZI6 239 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Olfr1342Q8VFY3 315 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Rpp25Q91WE3 199 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Asb10Q91ZT7 467 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Otud1Q9CUB6 454 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Gm4565A0A140LJ87 301 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Gm6176J3QK59 301 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Dll3O88516 592 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Gm4567Q3UTA8 301 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 9030612E09RikQ8CE20 140 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Olfr129Q8VEY1 330 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Olfr303Q8VFP0 319 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Sf3b5Q923D4 86 aaKnown RBP12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 5530401A14RikQ9D3H9 131 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Vmn1r63Q9EPT1 300 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 SrfQ9JM73 504 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 SktA2AQ25 1946 aaKnown RBP12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Hist1h1aP43275 213 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Rab7aP51150 207 aaKnown RBP12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Shc1P98083 579 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Olfr138Q7TRI7 312 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Olfr507Q8VG13 316 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Olfr136Q8VG72 312 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 NtmQ99PJ0 344 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Olfr1274-psA0A1L1SQ02 309 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 P01635 115 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Masp1P98064 704 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Tmem71Q149F5 287 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Thap4Q6P3Z3 569 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Smug1Q6P5C5 279 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 BtlaQ7TSA3 306 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Zfp747Q8BHM7 422 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Nfam1Q8R4V1 264 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Dusp18Q8VE01 188 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 LexmA2AVQ5 414 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Prrt2E9PUL5 346 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Vmn1r224E9PWK2 298 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Vax1Q2NKI2 338 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 BC147527Q3V185 167 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Pias2Q8C5D8 621 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Tmem178aQ9CZ16 297 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Mrpl13Q9D1P0 178 aaKnown RBP12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 RetnlaQ9EP95 111 aa12.84□□□□□ -0.35
Pcdha11-202ENSMUST00000115657 Olfr284A0A0U1RP76 321 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Adam6aB2RSY5 754 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Tarm1B6A8R8 288 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Vmn1r160E9Q346 307 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Casp16-psI6L890 176 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Vmn1r123L7N270 307 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Rom1P32958 351 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Rpl29P47915 160 aaKnown RBP12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Chrna7P49582 502 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Tmem147Q9CQG6 224 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Rcc1lQ9CYF5 461 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 9230110F15RikQ9D262 117 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Rsg1A2A825 258 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 OtpO09113 325 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Cldn1O88551 211 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 P01661 131 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 P01662 111 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 P01663 111 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Lyz1P17897 148 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Ccl9P51670 122 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Ppp1caP62137 330 aaKnown RBP12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Q0VG62 139 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Prss48Q14B25 312 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 CebpeQ6PZD9 281 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Clec4a1Q80UI7 245 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Olfr196E9PYP4 309 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 H2-LP01897 362 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Gm10840Q3V2K9 103 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Scgb2b24Q7M747 112 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 DapQ91XC8 102 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Rnps1Q99M28 305 aaKnown RBP12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Kcne4Q9WTW3 170 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Map1bP14873 2464 aaKnown RBP12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Zfp362B1ASA5 418 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 VhlP40338 181 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Smim6Q3U0I6 56 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Plppr5Q8BJ52 321 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Ankrd34cQ8BLB8 534 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Rab32Q9CZE3 223 aa12.83□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Prss47A0A0N4SVQ0 395 aa12.82□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Vsig10l2A0A140LHF2 776 aa12.82□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Gm14412A2ARR7 526 aa12.82□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Zfp456B2RUK9 458 aa12.82□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Fabp9O08716 132 aa12.82□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Ca10P61215 328 aa12.82□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Zfp772Q3UQL6 416 aa12.82□□□□□ -0.36
Pcdha11-202ENSMUST00000115657 Hes3Q61657 175 aa12.82□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 59.5 ms