Protein–RNA interactions for Protein: Q91WE3

Rpp25, Ribonuclease P protein subunit p25, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp25Q91WE3 Gm25239-201ENSMUST00000174915 86 ntBASIC38.77■■■■□ 3.8
Rpp25Q91WE3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.9■■■■□ 3.34
Rpp25Q91WE3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
Rpp25Q91WE3 Gm15042-201ENSMUST00000120212 883 ntBASIC33.77■■■■□ 3
Rpp25Q91WE3 Gm24109-201ENSMUST00000175489 103 ntBASIC33.65■■■□□ 2.98
Rpp25Q91WE3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Rpp25Q91WE3 Gm15045-201ENSMUST00000117359 883 ntBASIC33.06■■■□□ 2.88
Rpp25Q91WE3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Rpp25Q91WE3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
Rpp25Q91WE3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Rpp25Q91WE3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Rpp25Q91WE3 Gm23366-201ENSMUST00000175022 89 ntBASIC32.3■■■□□ 2.76
Rpp25Q91WE3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Rpp25Q91WE3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.98■■■□□ 2.71
Rpp25Q91WE3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Rpp25Q91WE3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.43■■■□□ 2.62
Rpp25Q91WE3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Rpp25Q91WE3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.23■■■□□ 2.59
Rpp25Q91WE3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.19■■■□□ 2.58
Rpp25Q91WE3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
Rpp25Q91WE3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Rpp25Q91WE3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Rpp25Q91WE3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.03■■■□□ 2.56
Rpp25Q91WE3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Rpp25Q91WE3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Rpp25Q91WE3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.78■■■□□ 2.52
Rpp25Q91WE3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Rpp25Q91WE3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Rpp25Q91WE3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Rpp25Q91WE3 Gm25238-201ENSMUST00000174914 89 ntBASIC30.66■■■□□ 2.5
Rpp25Q91WE3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Rpp25Q91WE3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
Rpp25Q91WE3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Rpp25Q91WE3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.54■■■□□ 2.48
Rpp25Q91WE3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.51■■■□□ 2.47
Rpp25Q91WE3 Psd-208ENSMUST00000224556 2034 ntBASIC30.44■■■□□ 2.46
Rpp25Q91WE3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Rpp25Q91WE3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.92■■■□□ 2.38
Rpp25Q91WE3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.92■■■□□ 2.38
Rpp25Q91WE3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Rpp25Q91WE3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.79■■■□□ 2.36
Rpp25Q91WE3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Rpp25Q91WE3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Rpp25Q91WE3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Rpp25Q91WE3 Gm27325-201ENSMUST00000175467 74 ntBASIC29.59■■■□□ 2.33
Rpp25Q91WE3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Rpp25Q91WE3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.56■■■□□ 2.32
Rpp25Q91WE3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Rpp25Q91WE3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
Rpp25Q91WE3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.42■■■□□ 2.3
Rpp25Q91WE3 Gm25262-201ENSMUST00000174934 133 ntBASIC29.32■■■□□ 2.28
Rpp25Q91WE3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Rpp25Q91WE3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Rpp25Q91WE3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.29■■■□□ 2.28
Rpp25Q91WE3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.27■■■□□ 2.28
Rpp25Q91WE3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Rpp25Q91WE3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.15■■■□□ 2.26
Rpp25Q91WE3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Rpp25Q91WE3 Rab21-202ENSMUST00000218831 843 ntBASIC29.07■■■□□ 2.24
Rpp25Q91WE3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Rpp25Q91WE3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.99■■■□□ 2.23
Rpp25Q91WE3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Rpp25Q91WE3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Rpp25Q91WE3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.86■■■□□ 2.21
Rpp25Q91WE3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
Rpp25Q91WE3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Rpp25Q91WE3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Rpp25Q91WE3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.8■■■□□ 2.2
Rpp25Q91WE3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
Rpp25Q91WE3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.78■■■□□ 2.2
Rpp25Q91WE3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Rpp25Q91WE3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.76■■■□□ 2.19
Rpp25Q91WE3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Rpp25Q91WE3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.73■■■□□ 2.19
Rpp25Q91WE3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Rpp25Q91WE3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
Rpp25Q91WE3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
Rpp25Q91WE3 Gm26115-201ENSMUST00000175605 87 ntBASIC28.6■■■□□ 2.17
Rpp25Q91WE3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Rpp25Q91WE3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Rpp25Q91WE3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Rpp25Q91WE3 Gm8109-201ENSMUST00000194076 746 ntBASIC28.52■■■□□ 2.16
Rpp25Q91WE3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Rpp25Q91WE3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Rpp25Q91WE3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Rpp25Q91WE3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Rpp25Q91WE3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Rpp25Q91WE3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Rpp25Q91WE3 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.46■■■□□ 2.15
Rpp25Q91WE3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Rpp25Q91WE3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Rpp25Q91WE3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.39■■■□□ 2.14
Rpp25Q91WE3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rpp25Q91WE3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.33■■■□□ 2.13
Rpp25Q91WE3 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.31■■■□□ 2.12
Rpp25Q91WE3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.31■■■□□ 2.12
Rpp25Q91WE3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.3■■■□□ 2.12
Rpp25Q91WE3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Rpp25Q91WE3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.2■■■□□ 2.1
Rpp25Q91WE3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms