RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Galnt14Q8BVG5 550 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Pla2g16Q8R3U1 162 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Stard4Q99JV5 224 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Atg12Q9CQY1 141 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 9130008F23RikQ9D2Z6 181 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 PifoQ9D9W1 207 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Plekha2Q9ERS5 425 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Arpc1bQ9WV32 372 aaKnown RBP11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Gm14692A2BH01 229 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 AsmtD3KU66 387 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Gm16519F8VQK7 162 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 P01795 144 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 P06335 190 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Cdx1P18111 268 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Hist1h1bP43276 223 aaKnown RBP11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 TspoP50637 169 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 ShbgP97497 403 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 UqcrhP99028 89 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Olfr1507Q0VEP0 313 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Gm5127Q3UQH6 212 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Gm12253Q5NC48 229 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Taar6Q5QD13 345 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 BC049762Q8C601 163 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 SpartQ8R1X6 671 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 RhovQ8VDU1 236 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Ucn3Q924A4 164 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Rpusd4Q9CWX4 377 aaKnown RBP11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Zfpl1Q9DB43 310 aa11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Ndufa7Q9Z1P6 113 aaKnown RBP11.62□□□□□ -0.55
Nup88-201ENSMUST00000035283 Gm42543A0A0G2JET4 117 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 Kdf1A2A9F4 397 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 Bloc1s1O55102 125 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 Cd46O88174 365 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 mt-Co3P00416 261 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 Hist1h3aP68433 136 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 Olfr1340Q3KPC7 315 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 Tmprss12Q3V0Q7 336 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 Olfr890Q7TRD9 314 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 Upk3bQ80YF6 275 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 BC049730Q810N3 246 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 Q8CDS7 251 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 Olfr460Q8VF31 314 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 Olfr435Q8VFS3 313 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 Defb7Q91V70 71 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 Sval1Q9D2X6 151 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 Psmb3Q9R1P1 205 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 Fbln5Q9WVH9 448 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 A630095N17RikJ3KMM7 116 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 IfnabL7MTU6 190 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 Hist1h2bmP10854 126 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 HhexP43120 271 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 Perm1Q149B8 807 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 Pate2Q3UW31 111 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 Hist1h2bhQ64478 126 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 Hist2h2bbQ64525 126 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 IslrQ6GU68 428 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 Tmeff1Q6PFE7 372 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 Hist1h2bcQ6ZWY9 126 aaKnown RBP11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 Prrg4Q8BGN6 226 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 AtcayQ8BHE3 372 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 Mef2cQ8CFN5 474 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 UmodQ91X17 642 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 Q9DAE8 263 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 Defb5Q9EPV9 64 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 HrgQ9ESB3 525 aa11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 Eif3iQ9QZD9 325 aaKnown RBP11.61□□□□□ -0.55
Nup88-201ENSMUST00000035283 Susd5G3UW60 619 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Olfr194L7N1Y8 306 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Olfr203L7N205 307 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Zfand5O88878 213 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 LalbaP29752 143 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 CryzP47199 331 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Nkx2-1P50220 372 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Trav8d-1Q5R1H8 112 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Oas1bQ60856 376 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 PcolceQ61398 468 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 St8sia1Q64687 355 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Olfr193Q7TS43 309 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 SargQ8BI29 606 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Ly6g6eQ8K1T6 166 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Acer1Q8R4X1 273 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Washc3Q9CR27 194 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Spsb1Q9D5L7 273 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Q9DAL9 119 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Fbxl17Q9QZN1 701 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Bod1lE9Q6J5 3032 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 CntrlA2AL36 2334 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Olfr1124A2AT86 318 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Gm15440D3Z3P4 90 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Olfr773F6VS78 311 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Gm20878L7N244 103 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Guca2aP33680 116 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Olfr1442Q0VEV7 312 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Gm11110Q3U4K9 109 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Zfp729aQ4QQP3 973 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Epha5Q60629 876 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Zfp455Q7M6X9 461 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Olfr132Q7TRI8 313 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Hspa12aQ8K0U4 675 aa11.6□□□□□ -0.55
Nup88-201ENSMUST00000035283 Olfr772Q8VGC5 311 aa11.6□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 62.1 ms