RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 TRGV5A0A0B4J1U4 118 aa12.51□□□□□ -0.41
VPS36-207ENST00000611132 GTF3AQ92664 365 aaKnown RBP12.51□□□□□ -0.41
VPS36-207ENST00000611132 MISP3Q96FF7 219 aa12.51□□□□□ -0.41
VPS36-207ENST00000611132 OR2V2Q96R30 315 aa12.51□□□□□ -0.41
VPS36-207ENST00000611132 WASHC3Q9Y3C0 194 aa12.51□□□□□ -0.41
VPS36-207ENST00000611132 RAB29O14966 203 aa12.51□□□□□ -0.41
VPS36-207ENST00000611132 IGHV2-5P01817 119 aa12.51□□□□□ -0.41
VPS36-207ENST00000611132 OPRK1P41145 380 aa12.51□□□□□ -0.41
VPS36-207ENST00000611132 DMRTA1Q5VZB9 504 aa12.51□□□□□ -0.41
VPS36-207ENST00000611132 ADTRPQ96IZ2 230 aa12.51□□□□□ -0.41
VPS36-207ENST00000611132 SYNGR3O43761 229 aa12.51□□□□□ -0.41
VPS36-207ENST00000611132 HTR1DP28221 377 aa12.51□□□□□ -0.41
VPS36-207ENST00000611132 NUBP1P53384 320 aa12.51□□□□□ -0.41
VPS36-207ENST00000611132 DRAM1Q8N682 238 aa12.51□□□□□ -0.41
VPS36-207ENST00000611132 OR1L4Q8NGR5 311 aa12.51□□□□□ -0.41
VPS36-207ENST00000611132 SCN5AQ14524 2016 aa12.51□□□□□ -0.41
VPS36-207ENST00000611132 ASXL3Q9C0F0 2248 aa12.51□□□□□ -0.41
VPS36-207ENST00000611132 HBZP02008 142 aa12.5□□□□□ -0.41
VPS36-207ENST00000611132 ARL14EPLP0DKL9 152 aa12.5□□□□□ -0.41
VPS36-207ENST00000611132 CHRNB4P30926 498 aa12.5□□□□□ -0.41
VPS36-207ENST00000611132 GNG10P50151 68 aa12.5□□□□□ -0.41
VPS36-207ENST00000611132 HS3ST3B1Q9Y662 390 aa12.5□□□□□ -0.41
VPS36-207ENST00000611132 CLDN14O95500 239 aa12.5□□□□□ -0.41
VPS36-207ENST00000611132 SP1P08047 785 aa12.5□□□□□ -0.41
VPS36-207ENST00000611132 SSPNQ14714 243 aa12.5□□□□□ -0.41
VPS36-207ENST00000611132 C19orf35Q6ZS72 473 aa12.5□□□□□ -0.41
VPS36-207ENST00000611132 MBD3L1Q8WWY6 194 aa12.5□□□□□ -0.41
VPS36-207ENST00000611132 PKIBQ9C010 78 aa12.5□□□□□ -0.41
VPS36-207ENST00000611132 FZR1Q9UM11 496 aa12.5□□□□□ -0.41
VPS36-207ENST00000611132 IGKV1D-13A0A0B4J2D9 117 aa12.5□□□□□ -0.41
VPS36-207ENST00000611132 LYZL6O75951 148 aa12.5□□□□□ -0.41
VPS36-207ENST00000611132 IGKV1-13P0DP09 117 aa12.5□□□□□ -0.41
VPS36-207ENST00000611132 CCL4P13236 92 aa12.5□□□□□ -0.41
VPS36-207ENST00000611132 CSN1S1P47710 185 aa12.5□□□□□ -0.41
VPS36-207ENST00000611132 MRPS11P82912 194 aaKnown RBP12.5□□□□□ -0.41
VPS36-207ENST00000611132 NHLH1Q02575 133 aa12.5□□□□□ -0.41
VPS36-207ENST00000611132 SLC25A53Q5H9E4 307 aa12.5□□□□□ -0.41
VPS36-207ENST00000611132 MMD2Q8IY49 270 aa12.5□□□□□ -0.41
VPS36-207ENST00000611132 PRSS3P2Q8NHM4 247 aa12.5□□□□□ -0.41
VPS36-207ENST00000611132 SRXN1Q9BYN0 137 aa12.5□□□□□ -0.41
VPS36-207ENST00000611132 RFNGQ9Y644 331 aa12.5□□□□□ -0.41
VPS36-207ENST00000611132 ATXN7O15265 892 aaPredicted RBP12.5□□□□□ -0.41
VPS36-207ENST00000611132 ALKBH6Q3KRA9 238 aa12.5□□□□□ -0.41
VPS36-207ENST00000611132 KIAA1644Q3SXP7 199 aa12.5□□□□□ -0.41
VPS36-207ENST00000611132 LEMD1Q68G75 181 aa12.5□□□□□ -0.41
VPS36-207ENST00000611132 OR1L1Q8NH94 360 aa12.5□□□□□ -0.41
VPS36-207ENST00000611132 C2orf88Q9BSF0 95 aa12.5□□□□□ -0.41
VPS36-207ENST00000611132 TRAV1-1A0A0B4J248 108 aa12.49□□□□□ -0.41
VPS36-207ENST00000611132 TEX50A0A1B0GTY4 177 aa12.49□□□□□ -0.41
VPS36-207ENST00000611132 ZNF891A8MT65 544 aaPredicted RBP12.49□□□□□ -0.41
VPS36-207ENST00000611132 BLNKQ8WV28 456 aa12.49□□□□□ -0.41
VPS36-207ENST00000611132 PRR19A6NJB7 356 aa12.49□□□□□ -0.41
VPS36-207ENST00000611132 DNLZQ5SXM8 178 aa12.49□□□□□ -0.41
VPS36-207ENST00000611132 OR2D3Q8NGH3 330 aa12.49□□□□□ -0.41
VPS36-207ENST00000611132 K7ERU9 68 aa12.49□□□□□ -0.41
VPS36-207ENST00000611132 ISLRO14498 428 aa12.49□□□□□ -0.41
VPS36-207ENST00000611132 S1PR2O95136 353 aa12.49□□□□□ -0.41
VPS36-207ENST00000611132 BEND2Q8NDZ0 799 aa12.49□□□□□ -0.41
VPS36-207ENST00000611132 ZPBPQ9BS86 351 aa12.49□□□□□ -0.41
VPS36-207ENST00000611132 NPCDR1Q9BY65 106 aa12.49□□□□□ -0.41
VPS36-207ENST00000611132 FOXJ2Q9P0K8 574 aa12.49□□□□□ -0.41
VPS36-207ENST00000611132 PROCRQ9UNN8 238 aa12.49□□□□□ -0.41
VPS36-207ENST00000611132 DNAJC13O75165 2243 aa12.49□□□□□ -0.41
VPS36-207ENST00000611132 TRBV9A0A0B4J1U6 114 aa12.49□□□□□ -0.41
VPS36-207ENST00000611132 S100A7P31151 101 aa12.49□□□□□ -0.41
VPS36-207ENST00000611132 NUTF2P61970 127 aaKnown RBP12.49□□□□□ -0.41
VPS36-207ENST00000611132 IBA57Q5T440 356 aaKnown RBP12.49□□□□□ -0.41
VPS36-207ENST00000611132 SARAFQ96BY9 339 aa12.49□□□□□ -0.41
VPS36-207ENST00000611132 OR2J1Q9GZK6 312 aa12.49□□□□□ -0.41
VPS36-207ENST00000611132 HIST1H1EP10412 219 aaKnown RBP12.48□□□□□ -0.41
VPS36-207ENST00000611132 SRIP30626 198 aa12.48□□□□□ -0.41
VPS36-207ENST00000611132 CCL11P51671 97 aa12.48□□□□□ -0.41
VPS36-207ENST00000611132 SLC25A40Q8TBP6 338 aa12.48□□□□□ -0.41
VPS36-207ENST00000611132 ZNF837Q96EG3 531 aaPredicted RBP12.48□□□□□ -0.41
VPS36-207ENST00000611132 MIEN1Q9BRT3 115 aa12.48□□□□□ -0.41
VPS36-207ENST00000611132 MAP1LC3CQ9BXW4 147 aa12.48□□□□□ -0.41
VPS36-207ENST00000611132 EGLN1Q9GZT9 426 aa12.48□□□□□ -0.41
VPS36-207ENST00000611132 PHF3Q92576 2039 aaKnown RBP12.48□□□□□ -0.41
VPS36-207ENST00000611132 CNIH1O95406 144 aa12.48□□□□□ -0.41
VPS36-207ENST00000611132 CSN3P07498 182 aa12.48□□□□□ -0.41
VPS36-207ENST00000611132 MEOX1P50221 254 aa12.48□□□□□ -0.41
VPS36-207ENST00000611132 ZNF441Q8N8Z8 693 aa12.48□□□□□ -0.41
VPS36-207ENST00000611132 BCL2L2Q92843 193 aaPredicted RBP12.48□□□□□ -0.41
VPS36-207ENST00000611132 WBP1Q96G27 269 aa12.48□□□□□ -0.41
VPS36-207ENST00000611132 DECR2Q9NUI1 292 aa12.48□□□□□ -0.41
VPS36-207ENST00000611132 TMEM210A6NLX4 147 aa12.48□□□□□ -0.41
VPS36-207ENST00000611132 SMPD2O60906 423 aa12.48□□□□□ -0.41
VPS36-207ENST00000611132 OR5AL1P0C617 328 aa12.48□□□□□ -0.41
VPS36-207ENST00000611132 FCER1GP30273 86 aa12.48□□□□□ -0.41
VPS36-207ENST00000611132 PDPNQ86YL7 162 aa12.48□□□□□ -0.41
VPS36-207ENST00000611132 TMEM251Q8N6I4 163 aa12.48□□□□□ -0.41
VPS36-207ENST00000611132 TPRX1Q8N7U7 411 aa12.48□□□□□ -0.41
VPS36-207ENST00000611132 SAP30LQ9HAJ7 183 aa12.48□□□□□ -0.41
VPS36-207ENST00000611132 TCFL5Q9UL49 500 aa12.48□□□□□ -0.41
VPS36-207ENST00000611132 ESPL1Q14674 2120 aa12.47□□□□□ -0.41
VPS36-207ENST00000611132 SPRY3O43610 288 aa12.47□□□□□ -0.41
VPS36-207ENST00000611132 CEACAM1P13688 526 aa12.47□□□□□ -0.41
VPS36-207ENST00000611132 TNFSF10P50591 281 aa12.47□□□□□ -0.41
VPS36-207ENST00000611132 PQLC2Q6ZP29 291 aa12.47□□□□□ -0.41
VPS36-207ENST00000611132 MDP1Q86V88 176 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms