RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 KIAA2026Q5HYC2 2103 aa0.94□□□□□ -2.26
SMCHD1-207ENST00000581711 MALRD1Q5VYJ5 2156 aa0.93□□□□□ -2.26
SMCHD1-207ENST00000581711 NPATQ14207 1427 aa0.93□□□□□ -2.26
SMCHD1-207ENST00000581711 TRBV6-5A0A0K0K1A5 114 aa0.93□□□□□ -2.26
SMCHD1-207ENST00000581711 BHLHE40O14503 412 aa0.93□□□□□ -2.26
SMCHD1-207ENST00000581711 TXNDC9O14530 226 aa0.93□□□□□ -2.26
SMCHD1-207ENST00000581711 TMEM258P61165 79 aa0.93□□□□□ -2.26
SMCHD1-207ENST00000581711 DAD1P61803 113 aa0.93□□□□□ -2.26
SMCHD1-207ENST00000581711 OR2D3Q8NGH3 330 aa0.93□□□□□ -2.26
SMCHD1-207ENST00000581711 SMCR5Q8TEV8 140 aa0.93□□□□□ -2.26
SMCHD1-207ENST00000581711 SMIM12Q96EX1 92 aa0.93□□□□□ -2.26
SMCHD1-207ENST00000581711 NAV1Q8NEY1 1877 aa0.92□□□□□ -2.26
SMCHD1-207ENST00000581711 PCDH15Q96QU1 1955 aa0.92□□□□□ -2.26
SMCHD1-207ENST00000581711 METTL15A6NJ78 407 aa0.92□□□□□ -2.26
SMCHD1-207ENST00000581711 M0R381 172 aa0.92□□□□□ -2.26
SMCHD1-207ENST00000581711 TPM1P09493 284 aa0.92□□□□□ -2.26
SMCHD1-207ENST00000581711 CD24P25063 80 aa0.92□□□□□ -2.26
SMCHD1-207ENST00000581711 PRB3Q04118 309 aaPredicted RBP0.92□□□□□ -2.26
SMCHD1-207ENST00000581711 GLO1Q04760 184 aa0.92□□□□□ -2.26
SMCHD1-207ENST00000581711 SMAGPQ0VAQ4 97 aa0.92□□□□□ -2.26
SMCHD1-207ENST00000581711 SYCP1Q15431 976 aa0.92□□□□□ -2.26
SMCHD1-207ENST00000581711 EXOC3L4Q17RC7 722 aa0.92□□□□□ -2.26
SMCHD1-207ENST00000581711 AADACL4Q5VUY2 407 aa0.92□□□□□ -2.26
SMCHD1-207ENST00000581711 OR10K2Q6IF99 312 aa0.92□□□□□ -2.26
SMCHD1-207ENST00000581711 LCN8Q6JVE9 175 aa0.92□□□□□ -2.26
SMCHD1-207ENST00000581711 BAP18Q8IXM2 172 aa0.92□□□□□ -2.26
SMCHD1-207ENST00000581711 LRRC34Q8IZ02 419 aa0.92□□□□□ -2.26
SMCHD1-207ENST00000581711 SFRP2Q96HF1 295 aa0.92□□□□□ -2.26
SMCHD1-207ENST00000581711 OR7D2Q96RA2 312 aa0.92□□□□□ -2.26
SMCHD1-207ENST00000581711 EIF5A2Q9GZV4 153 aaKnown RBP0.92□□□□□ -2.26
SMCHD1-207ENST00000581711 VCX3BQ9H321 246 aa0.92□□□□□ -2.26
SMCHD1-207ENST00000581711 TAAR3PQ9P1P4 343 aa0.92□□□□□ -2.26
SMCHD1-207ENST00000581711 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.92□□□□□ -2.26
SMCHD1-207ENST00000581711 TMEM94Q12767 1356 aa0.92□□□□□ -2.26
SMCHD1-207ENST00000581711 MYOFQ9NZM1 2061 aa0.92□□□□□ -2.26
SMCHD1-207ENST00000581711 DLG5Q8TDM6 1919 aa0.91□□□□□ -2.26
SMCHD1-207ENST00000581711 CPAMD8Q8IZJ3 1885 aa0.91□□□□□ -2.26
SMCHD1-207ENST00000581711 SMLR1H3BR10 107 aa0.91□□□□□ -2.26
SMCHD1-207ENST00000581711 GPX2P18283 190 aa0.91□□□□□ -2.26
SMCHD1-207ENST00000581711 RBM11P57052 281 aaKnown RBP0.91□□□□□ -2.26
SMCHD1-207ENST00000581711 ZNHIT3Q15649 155 aaPredicted RBP0.91□□□□□ -2.26
SMCHD1-207ENST00000581711 C4orf26Q17RF5 130 aa0.91□□□□□ -2.26
SMCHD1-207ENST00000581711 LGALS9BQ3B8N2 356 aa0.91□□□□□ -2.26
SMCHD1-207ENST00000581711 SLC36A2Q495M3 483 aa0.91□□□□□ -2.26
SMCHD1-207ENST00000581711 BOD1L2Q8IYS8 172 aa0.91□□□□□ -2.26
SMCHD1-207ENST00000581711 ATP6V1C2Q8NEY4 427 aa0.91□□□□□ -2.26
SMCHD1-207ENST00000581711 NMNAT3Q96T66 252 aa0.91□□□□□ -2.26
SMCHD1-207ENST00000581711 C8orf4Q9NR00 106 aa0.91□□□□□ -2.26
SMCHD1-207ENST00000581711 POLR3HQ9Y535 204 aaPredicted RBP0.91□□□□□ -2.26
SMCHD1-207ENST00000581711 ATP5G1P05496 136 aa0.9□□□□□ -2.27
SMCHD1-207ENST00000581711 UCHL1P09936 223 aa0.9□□□□□ -2.27
SMCHD1-207ENST00000581711 DEFA4P12838 97 aa0.9□□□□□ -2.27
SMCHD1-207ENST00000581711 G6PCP35575 357 aa0.9□□□□□ -2.27
SMCHD1-207ENST00000581711 GNA12Q03113 381 aa0.9□□□□□ -2.27
SMCHD1-207ENST00000581711 RIBC1Q8N443 379 aaPredicted RBP0.9□□□□□ -2.27
SMCHD1-207ENST00000581711 PPCDCQ96CD2 204 aa0.9□□□□□ -2.27
SMCHD1-207ENST00000581711 TLCD1Q96CP7 247 aa0.9□□□□□ -2.27
SMCHD1-207ENST00000581711 CYSTM1Q9H1C7 97 aa0.9□□□□□ -2.27
SMCHD1-207ENST00000581711 REREQ9P2R6 1566 aa0.9□□□□□ -2.27
SMCHD1-207ENST00000581711 ZFHX2Q9C0A1 2572 aaPredicted RBP0.9□□□□□ -2.27
SMCHD1-207ENST00000581711 MAP3K19Q56UN5 1328 aa0.89□□□□□ -2.27
SMCHD1-207ENST00000581711 THSD7AQ9UPZ6 1657 aa0.89□□□□□ -2.27
SMCHD1-207ENST00000581711 IGHV3-64A0A075B6Q5 118 aa0.89□□□□□ -2.27
SMCHD1-207ENST00000581711 DAPL1A0PJW8 107 aa0.89□□□□□ -2.27
SMCHD1-207ENST00000581711 COPEO14579 308 aa0.89□□□□□ -2.27
SMCHD1-207ENST00000581711 CFL1P23528 166 aaKnown RBP0.89□□□□□ -2.27
SMCHD1-207ENST00000581711 KDELR2P33947 212 aa0.89□□□□□ -2.27
SMCHD1-207ENST00000581711 IFNGR2P38484 337 aa0.89□□□□□ -2.27
SMCHD1-207ENST00000581711 CRATP43155 626 aa0.89□□□□□ -2.27
SMCHD1-207ENST00000581711 GABRA2P47869 451 aa0.89□□□□□ -2.27
SMCHD1-207ENST00000581711 ETV1P50549 477 aa0.89□□□□□ -2.27
SMCHD1-207ENST00000581711 H2BFSP57053 126 aa0.89□□□□□ -2.27
SMCHD1-207ENST00000581711 HPCAP84074 193 aa0.89□□□□□ -2.27
SMCHD1-207ENST00000581711 NNATQ16517 81 aa0.89□□□□□ -2.27
SMCHD1-207ENST00000581711 Q8WTZ3 238 aa0.89□□□□□ -2.27
SMCHD1-207ENST00000581711 RNF133Q8WVZ7 376 aa0.89□□□□□ -2.27
SMCHD1-207ENST00000581711 MROQ9BYG7 248 aa0.89□□□□□ -2.27
SMCHD1-207ENST00000581711 METTL9Q9H1A3 318 aa0.89□□□□□ -2.27
SMCHD1-207ENST00000581711 PARVAQ9NVD7 372 aa0.89□□□□□ -2.27
SMCHD1-207ENST00000581711 EMC3Q9P0I2 261 aa0.89□□□□□ -2.27
SMCHD1-207ENST00000581711 HDGFL3Q9Y3E1 203 aa0.89□□□□□ -2.27
SMCHD1-207ENST00000581711 SOX21Q9Y651 276 aaPredicted RBP0.89□□□□□ -2.27
SMCHD1-207ENST00000581711 GRIN2BQ13224 1484 aa0.88□□□□□ -2.27
SMCHD1-207ENST00000581711 SIPA1L1O43166 1804 aa0.88□□□□□ -2.27
SMCHD1-207ENST00000581711 TRAV8-1A0A0A6YYK1 113 aa0.88□□□□□ -2.27
SMCHD1-207ENST00000581711 IGKV3D-7A0A0C4DH55 119 aa0.88□□□□□ -2.27
SMCHD1-207ENST00000581711 IGKV3OR2-268A0A0C4DH90 116 aa0.88□□□□□ -2.27
SMCHD1-207ENST00000581711 AZIN1O14977 448 aa0.88□□□□□ -2.27
SMCHD1-207ENST00000581711 NDUFB2O95178 105 aa0.88□□□□□ -2.27
SMCHD1-207ENST00000581711 NPYP01303 97 aa0.88□□□□□ -2.27
SMCHD1-207ENST00000581711 CRPP02741 224 aa0.88□□□□□ -2.27
SMCHD1-207ENST00000581711 CXCL2P19875 107 aa0.88□□□□□ -2.27
SMCHD1-207ENST00000581711 CXCL3P19876 107 aa0.88□□□□□ -2.27
SMCHD1-207ENST00000581711 AQP4P55087 323 aa0.88□□□□□ -2.27
SMCHD1-207ENST00000581711 TMEM33P57088 247 aa0.88□□□□□ -2.27
SMCHD1-207ENST00000581711 OR1L8Q8NGR8 309 aa0.88□□□□□ -2.27
SMCHD1-207ENST00000581711 STOML3Q8TAV4 291 aa0.88□□□□□ -2.27
SMCHD1-207ENST00000581711 MED10Q9BTT4 135 aa0.88□□□□□ -2.27
SMCHD1-207ENST00000581711 RBM7Q9Y580 266 aaKnown RBP0.88□□□□□ -2.27
SMCHD1-207ENST00000581711 FREM1Q5H8C1 2179 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms