RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 PLK3Q9H4B4 646 aa12.41□□□□□ -0.42
DDX55-209ENST00000542286 VSIRQ9H7M9 311 aa12.41□□□□□ -0.42
DDX55-209ENST00000542286 NBASA2RRP1 2371 aa12.41□□□□□ -0.42
DDX55-209ENST00000542286 KIAA1324LA8MWY0 1029 aaPredicted RBP12.41□□□□□ -0.42
DDX55-209ENST00000542286 HAND1O96004 215 aa12.41□□□□□ -0.42
DDX55-209ENST00000542286 CECR9P0C854 216 aa12.41□□□□□ -0.42
DDX55-209ENST00000542286 SSTR5P35346 364 aa12.41□□□□□ -0.42
DDX55-209ENST00000542286 ZNF816Q0VGE8 651 aaPredicted RBP12.41□□□□□ -0.42
DDX55-209ENST00000542286 C21orf62-AS1Q17RA5 79 aa12.41□□□□□ -0.42
DDX55-209ENST00000542286 ZNF506Q5JVG8 444 aa12.41□□□□□ -0.42
DDX55-209ENST00000542286 LRP11Q86VZ4 500 aa12.41□□□□□ -0.42
DDX55-209ENST00000542286 C11orf53Q8IXP5 236 aa12.41□□□□□ -0.42
DDX55-209ENST00000542286 OR5D13Q8NGL4 314 aa12.41□□□□□ -0.42
DDX55-209ENST00000542286 ACTR3CQ9C0K3 210 aaPredicted RBP12.41□□□□□ -0.42
DDX55-209ENST00000542286 RPL23AP62750 156 aaKnown RBP12.41□□□□□ -0.42
DDX55-209ENST00000542286 SRPXP78539 464 aa12.41□□□□□ -0.42
DDX55-209ENST00000542286 TGFBR3Q03167 851 aa12.41□□□□□ -0.42
DDX55-209ENST00000542286 MSMPQ1L6U9 139 aa12.41□□□□□ -0.42
DDX55-209ENST00000542286 Q6ZT83 130 aa12.41□□□□□ -0.42
DDX55-209ENST00000542286 DRAM1Q8N682 238 aa12.41□□□□□ -0.42
DDX55-209ENST00000542286 OR8G5Q8NG78 346 aa12.41□□□□□ -0.42
DDX55-209ENST00000542286 RNASEH2CQ8TDP1 164 aaKnown RBP12.41□□□□□ -0.42
DDX55-209ENST00000542286 B4DEV8 164 aa12.4□□□□□ -0.42
DDX55-209ENST00000542286 CLDN34H7C241 214 aa12.4□□□□□ -0.42
DDX55-209ENST00000542286 CTXN2P0C2S0 81 aa12.4□□□□□ -0.42
DDX55-209ENST00000542286 RPL30P62888 115 aaKnown RBP12.4□□□□□ -0.42
DDX55-209ENST00000542286 ZNF266Q14584 549 aa12.4□□□□□ -0.42
DDX55-209ENST00000542286 THNSL2Q86YJ6 484 aa12.4□□□□□ -0.42
DDX55-209ENST00000542286 SPIN2AQ99865 258 aa12.4□□□□□ -0.42
DDX55-209ENST00000542286 SPIN2BQ9BPZ2 258 aa12.4□□□□□ -0.42
DDX55-209ENST00000542286 C12orf77C9JDV5 145 aa12.4□□□□□ -0.43
DDX55-209ENST00000542286 K7EM74 188 aa12.4□□□□□ -0.43
DDX55-209ENST00000542286 TGOLN2O43493 480 aa12.4□□□□□ -0.43
DDX55-209ENST00000542286 TIMM8AO60220 97 aaPredicted RBP12.4□□□□□ -0.43
DDX55-209ENST00000542286 CD200P41217 278 aa12.4□□□□□ -0.43
DDX55-209ENST00000542286 GABRA2P47869 451 aa12.4□□□□□ -0.43
DDX55-209ENST00000542286 VHLLQ6RSH7 139 aa12.4□□□□□ -0.43
DDX55-209ENST00000542286 PIP4P1Q86T03 277 aa12.4□□□□□ -0.43
DDX55-209ENST00000542286 CLDND2Q8NHS1 167 aa12.4□□□□□ -0.43
DDX55-209ENST00000542286 CABLES2Q9BTV7 478 aa12.4□□□□□ -0.43
DDX55-209ENST00000542286 PITX3O75364 302 aa12.39□□□□□ -0.43
DDX55-209ENST00000542286 KRASP01116 189 aa12.39□□□□□ -0.43
DDX55-209ENST00000542286 MRPL49Q13405 166 aaKnown RBP12.39□□□□□ -0.43
DDX55-209ENST00000542286 EDDM3AQ14507 147 aa12.39□□□□□ -0.43
DDX55-209ENST00000542286 OR4X1Q8NH49 305 aa12.39□□□□□ -0.43
DDX55-209ENST00000542286 ABHD14BQ96IU4 210 aa12.39□□□□□ -0.43
DDX55-209ENST00000542286 SNHG12Q9BXW3 62 aa12.39□□□□□ -0.43
DDX55-209ENST00000542286 OR2D2Q9H210 308 aa12.39□□□□□ -0.43
DDX55-209ENST00000542286 DUSP13Q9UII6 198 aa12.39□□□□□ -0.43
DDX55-209ENST00000542286 RND2P52198 227 aa12.39□□□□□ -0.43
DDX55-209ENST00000542286 SP5Q6BEB4 398 aaPredicted RBP12.39□□□□□ -0.43
DDX55-209ENST00000542286 RIMS4Q9H426 269 aaPredicted RBP12.39□□□□□ -0.43
DDX55-209ENST00000542286 ZGRF1Q86YA3 2104 aa12.39□□□□□ -0.43
DDX55-209ENST00000542286 SH2D1BO14796 132 aa12.38□□□□□ -0.43
DDX55-209ENST00000542286 SOX15O60248 233 aa12.38□□□□□ -0.43
DDX55-209ENST00000542286 G6PCP35575 357 aa12.38□□□□□ -0.43
DDX55-209ENST00000542286 FGF8P55075 233 aaPredicted RBP12.38□□□□□ -0.43
DDX55-209ENST00000542286 RAB11AP62491 216 aa12.38□□□□□ -0.43
DDX55-209ENST00000542286 SRSF7Q16629 238 aaKnown RBP eCLIP12.38□□□□□ -0.43
DDX55-209ENST00000542286 UTF1Q5T230 341 aa12.38□□□□□ -0.43
DDX55-209ENST00000542286 SLC25A24Q6NUK1 477 aa12.38□□□□□ -0.43
DDX55-209ENST00000542286 HAPLN4Q86UW8 402 aa12.38□□□□□ -0.43
DDX55-209ENST00000542286 COQ2Q96H96 371 aa12.38□□□□□ -0.43
DDX55-209ENST00000542286 DKK4Q9UBT3 224 aa12.38□□□□□ -0.43
DDX55-209ENST00000542286 IGHV3OR15-7A0A075B7D8 119 aa12.38□□□□□ -0.43
DDX55-209ENST00000542286 ZZEF1O43149 2961 aa12.38□□□□□ -0.43
DDX55-209ENST00000542286 RAC2P15153 192 aa12.38□□□□□ -0.43
DDX55-209ENST00000542286 ZNF25P17030 456 aaPredicted RBP12.38□□□□□ -0.43
DDX55-209ENST00000542286 HOXC12P31275 282 aa12.38□□□□□ -0.43
DDX55-209ENST00000542286 SPANXN5Q5MJ07 72 aa12.38□□□□□ -0.43
DDX55-209ENST00000542286 FAM201AQ5SY85 155 aa12.38□□□□□ -0.43
DDX55-209ENST00000542286 SSX7Q7RTT5 188 aa12.38□□□□□ -0.43
DDX55-209ENST00000542286 POLDIP2Q9Y2S7 368 aa12.38□□□□□ -0.43
DDX55-209ENST00000542286 TRBV24-1A0A075B6N3 115 aa12.37□□□□□ -0.43
DDX55-209ENST00000542286 IQCF6A8MYZ5 107 aa12.37□□□□□ -0.43
DDX55-209ENST00000542286 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.37□□□□□ -0.43
DDX55-209ENST00000542286 HMGB3O15347 200 aaKnown RBP12.37□□□□□ -0.43
DDX55-209ENST00000542286 IGHG3P01860 377 aa12.37□□□□□ -0.43
DDX55-209ENST00000542286 MBP02144 154 aa12.37□□□□□ -0.43
DDX55-209ENST00000542286 CD55P08174 381 aa12.37□□□□□ -0.43
DDX55-209ENST00000542286 SEM1Q6ZVN7 128 aa12.37□□□□□ -0.43
DDX55-209ENST00000542286 OR1P1Q8NH06 330 aa12.37□□□□□ -0.43
DDX55-209ENST00000542286 TMEM242Q9NWH2 141 aa12.37□□□□□ -0.43
DDX55-209ENST00000542286 LRBAP50851 2863 aa12.37□□□□□ -0.43
DDX55-209ENST00000542286 TRBV6-6A0A0A6YYG2 114 aa12.37□□□□□ -0.43
DDX55-209ENST00000542286 A0A1B0GU03 582 aa12.37□□□□□ -0.43
DDX55-209ENST00000542286 DFFBO76075 338 aa12.37□□□□□ -0.43
DDX55-209ENST00000542286 ZNF83P51522 516 aa12.37□□□□□ -0.43
DDX55-209ENST00000542286 ZNF146Q15072 292 aa12.37□□□□□ -0.43
DDX55-209ENST00000542286 OR8G2PQ6IF36 304 aa12.37□□□□□ -0.43
DDX55-209ENST00000542286 WDR82Q6UXN9 313 aa12.37□□□□□ -0.43
DDX55-209ENST00000542286 LINC00596Q86U02 117 aa12.37□□□□□ -0.43
DDX55-209ENST00000542286 OR13A1Q8NGR1 328 aa12.37□□□□□ -0.43
DDX55-209ENST00000542286 FAM234AQ9H0X4 552 aa12.37□□□□□ -0.43
DDX55-209ENST00000542286 RYDENQ9NUL5 291 aaKnown RBP12.37□□□□□ -0.43
DDX55-209ENST00000542286 ARFGEF3Q5TH69 2177 aa12.37□□□□□ -0.43
DDX55-209ENST00000542286 CLEC18AA5D8T8 446 aa12.36□□□□□ -0.43
DDX55-209ENST00000542286 CYB5R3P00387 301 aaPredicted RBP12.36□□□□□ -0.43
DDX55-209ENST00000542286 HBZP02008 142 aa12.36□□□□□ -0.43
DDX55-209ENST00000542286 DEFA4P12838 97 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms