RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 SOD3P08294 240 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 OR4F5Q8NH21 305 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 IL22RA2Q969J5 263 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 OR4F4Q96R69 305 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 GGACTQ9BVM4 153 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 ELOVL1Q9BW60 279 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 GAB2Q9UQC2 676 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 FABP4P15090 132 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 S100PP25815 95 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 PAX6P26367 422 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 TNFSF10P50591 281 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 LRRC75BQ2VPJ9 315 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 KHDC3LQ587J8 217 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 PYY3Q5JQD4 70 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 ZNRF1Q8ND25 227 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 CA5BP1Q8WTZ4 195 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 FAM210BQ96KR6 192 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 YPEL4Q96NS1 127 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 TOLLIPQ9H0E2 274 aa11.44□□□□□ -0.58
BNIP3-202ENST00000540159 ZNF292O60281 2723 aa11.43□□□□□ -0.58
BNIP3-202ENST00000540159 PLXNB1O43157 2135 aa11.43□□□□□ -0.58
BNIP3-202ENST00000540159 TRAV38-1A0A0B4J264 116 aa11.43□□□□□ -0.58
BNIP3-202ENST00000540159 TMEM30CPA0ZSE6 113 aa11.43□□□□□ -0.58
BNIP3-202ENST00000540159 BTBD17A6NE02 478 aa11.43□□□□□ -0.58
BNIP3-202ENST00000540159 FCGR3BO75015 233 aa11.43□□□□□ -0.58
BNIP3-202ENST00000540159 S100A8P05109 93 aa11.43□□□□□ -0.58
BNIP3-202ENST00000540159 CECR9P0C854 216 aa11.43□□□□□ -0.58
BNIP3-202ENST00000540159 TRGC1P0CF51 173 aa11.43□□□□□ -0.58
BNIP3-202ENST00000540159 SMIM6P0DI80 62 aa11.43□□□□□ -0.58
BNIP3-202ENST00000540159 GABRA6Q16445 453 aa11.43□□□□□ -0.58
BNIP3-202ENST00000540159 FFAR4Q5NUL3 377 aa11.43□□□□□ -0.58
BNIP3-202ENST00000540159 DEFB124Q8NES8 71 aa11.43□□□□□ -0.58
BNIP3-202ENST00000540159 OR51G1Q8NGK1 321 aa11.43□□□□□ -0.58
BNIP3-202ENST00000540159 EDARADDQ8WWZ3 215 aa11.43□□□□□ -0.58
BNIP3-202ENST00000540159 ZNF251Q9BRH9 671 aa11.43□□□□□ -0.58
BNIP3-202ENST00000540159 OPA3Q9H6K4 179 aa11.43□□□□□ -0.58
BNIP3-202ENST00000540159 PGPEP1LA6NFU8 196 aa11.43□□□□□ -0.58
BNIP3-202ENST00000540159 PPIHO43447 177 aaKnown RBP11.43□□□□□ -0.58
BNIP3-202ENST00000540159 SRSF7Q16629 238 aaKnown RBP eCLIP11.43□□□□□ -0.58
BNIP3-202ENST00000540159 FAM214BQ7L5A3 538 aa11.43□□□□□ -0.58
BNIP3-202ENST00000540159 H2BFWTQ7Z2G1 175 aa11.43□□□□□ -0.58
BNIP3-202ENST00000540159 LINC00596Q86U02 117 aa11.43□□□□□ -0.58
BNIP3-202ENST00000540159 C11orf53Q8IXP5 236 aa11.43□□□□□ -0.58
BNIP3-202ENST00000540159 TMEM178AQ8NBL3 297 aa11.43□□□□□ -0.58
BNIP3-202ENST00000540159 DEFB108BQ8NET1 73 aa11.43□□□□□ -0.58
BNIP3-202ENST00000540159 DTD1Q8TEA8 209 aa11.43□□□□□ -0.58
BNIP3-202ENST00000540159 LRRC29Q8WV35 223 aa11.43□□□□□ -0.58
BNIP3-202ENST00000540159 PATZ1Q9HBE1 687 aaKnown RBP11.43□□□□□ -0.58
BNIP3-202ENST00000540159 GNG12Q9UBI6 72 aa11.43□□□□□ -0.58
BNIP3-202ENST00000540159 OPN1MWP04001 364 aa11.42□□□□□ -0.58
BNIP3-202ENST00000540159 OPN1MW2P0DN77 364 aa11.42□□□□□ -0.58
BNIP3-202ENST00000540159 OPN1MW3P0DN78 364 aa11.42□□□□□ -0.58
BNIP3-202ENST00000540159 NKX6-1P78426 367 aaPredicted RBP11.42□□□□□ -0.58
BNIP3-202ENST00000540159 ZNF146Q15072 292 aa11.42□□□□□ -0.58
BNIP3-202ENST00000540159 RPL39P5Q59GN2 51 aa11.42□□□□□ -0.58
BNIP3-202ENST00000540159 FAM209BQ5JX69 171 aa11.42□□□□□ -0.58
BNIP3-202ENST00000540159 WDR82Q6UXN9 313 aa11.42□□□□□ -0.58
BNIP3-202ENST00000540159 RPRMLQ8N4K4 120 aa11.42□□□□□ -0.58
BNIP3-202ENST00000540159 GMPPAQ96IJ6 420 aaPredicted RBP11.42□□□□□ -0.58
BNIP3-202ENST00000540159 WFIKKN1Q96NZ8 548 aa11.42□□□□□ -0.58
BNIP3-202ENST00000540159 CEACAM1P13688 526 aa11.42□□□□□ -0.58
BNIP3-202ENST00000540159 ZNF83P51522 516 aa11.42□□□□□ -0.58
BNIP3-202ENST00000540159 NCR3LG1Q68D85 454 aa11.42□□□□□ -0.58
BNIP3-202ENST00000540159 ZNF645Q8N7E2 425 aa11.42□□□□□ -0.58
BNIP3-202ENST00000540159 OR10G4Q8NGN3 311 aa11.42□□□□□ -0.58
BNIP3-202ENST00000540159 OR10G9Q8NGN4 311 aa11.42□□□□□ -0.58
BNIP3-202ENST00000540159 OR10G7Q8NGN6 311 aa11.42□□□□□ -0.58
BNIP3-202ENST00000540159 ABHD5Q8WTS1 349 aa11.42□□□□□ -0.58
BNIP3-202ENST00000540159 LSM10Q969L4 123 aaKnown RBP11.42□□□□□ -0.58
BNIP3-202ENST00000540159 HINT2Q9BX68 163 aa11.42□□□□□ -0.58
BNIP3-202ENST00000540159 TRBV6-6A0A0A6YYG2 114 aa11.41□□□□□ -0.58
BNIP3-202ENST00000540159 A0A0U1RQK1 487 aa11.41□□□□□ -0.58
BNIP3-202ENST00000540159 C1QTNF9BB2RNN3 333 aa11.41□□□□□ -0.58
BNIP3-202ENST00000540159 PAGE4O60829 102 aa11.41□□□□□ -0.58
BNIP3-202ENST00000540159 S100A2P29034 98 aa11.41□□□□□ -0.58
BNIP3-202ENST00000540159 TRIP6Q15654 476 aaKnown RBP11.41□□□□□ -0.58
BNIP3-202ENST00000540159 PRSS8Q16651 343 aa11.41□□□□□ -0.58
BNIP3-202ENST00000540159 QTRT1Q9BXR0 403 aaKnown RBP11.41□□□□□ -0.58
BNIP3-202ENST00000540159 SEBOXQ9HB31 216 aaPredicted RBP11.41□□□□□ -0.58
BNIP3-202ENST00000540159 MBNL3Q9NUK0 354 aaKnown RBP11.41□□□□□ -0.58
BNIP3-202ENST00000540159 ABCA4P78363 2273 aa11.41□□□□□ -0.58
BNIP3-202ENST00000540159 A0A1W2PPQ1 181 aa11.41□□□□□ -0.58
BNIP3-202ENST00000540159 KIR2DL2P43627 348 aaPredicted RBP11.41□□□□□ -0.58
BNIP3-202ENST00000540159 CD81P60033 236 aa11.41□□□□□ -0.58
BNIP3-202ENST00000540159 TMEM41BQ5BJD5 291 aa11.41□□□□□ -0.58
BNIP3-202ENST00000540159 DUX4L9Q6RFH8 374 aaPredicted RBP11.41□□□□□ -0.58
BNIP3-202ENST00000540159 ASH1LQ9NR48 2969 aaKnown RBP11.41□□□□□ -0.58
BNIP3-202ENST00000540159 A0A1B0GW64 132 aa11.41□□□□□ -0.58
BNIP3-202ENST00000540159 LRRC30A6NM36 301 aa11.41□□□□□ -0.58
BNIP3-202ENST00000540159 MSMPQ1L6U9 139 aa11.41□□□□□ -0.58
BNIP3-202ENST00000540159 DEFB109BQ30KR1 87 aa11.41□□□□□ -0.58
BNIP3-202ENST00000540159 ACP7Q6ZNF0 438 aa11.41□□□□□ -0.58
BNIP3-202ENST00000540159 OR10P1Q8NGE3 313 aa11.41□□□□□ -0.58
BNIP3-202ENST00000540159 TRAV3A0A0B4J244 114 aa11.4□□□□□ -0.58
BNIP3-202ENST00000540159 SPRY3O43610 288 aa11.4□□□□□ -0.58
BNIP3-202ENST00000540159 MYOD1P15172 320 aa11.4□□□□□ -0.58
BNIP3-202ENST00000540159 GCH1P30793 250 aa11.4□□□□□ -0.58
BNIP3-202ENST00000540159 CST9LP1Q5W188 147 aa11.4□□□□□ -0.58
BNIP3-202ENST00000540159 C16orf82Q7Z2V1 217 aa11.4□□□□□ -0.58
BNIP3-202ENST00000540159 CD177Q8N6Q3 437 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms