RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 MARS2Q96GW9 593 aaKnown RBP8.61□□□□□ -1.03
COL4A6-208ENST00000538570 RARRES2Q99969 163 aa8.61□□□□□ -1.03
COL4A6-208ENST00000538570 MOB4Q9Y3A3 225 aa8.61□□□□□ -1.03
COL4A6-208ENST00000538570 TRBV5-3A0A0A0MS03 114 aa8.61□□□□□ -1.03
COL4A6-208ENST00000538570 A0A1W2PS18 150 aa8.61□□□□□ -1.03
COL4A6-208ENST00000538570 ZNF488Q96MN9 340 aa8.61□□□□□ -1.03
COL4A6-208ENST00000538570 MAP1LC3AQ9H492 121 aa8.61□□□□□ -1.03
COL4A6-208ENST00000538570 PAPPA2Q9BXP8 1791 aa8.61□□□□□ -1.03
COL4A6-208ENST00000538570 RREB1Q92766 1687 aa8.61□□□□□ -1.03
COL4A6-208ENST00000538570 A0A0U1RQV5 110 aa8.61□□□□□ -1.03
COL4A6-208ENST00000538570 DLL1O00548 723 aa8.61□□□□□ -1.03
COL4A6-208ENST00000538570 LIPFP07098 398 aa8.61□□□□□ -1.03
COL4A6-208ENST00000538570 CCL4P13236 92 aa8.61□□□□□ -1.03
COL4A6-208ENST00000538570 LGALS3P17931 250 aaKnown RBP8.61□□□□□ -1.03
COL4A6-208ENST00000538570 SELENOTP62341 195 aa8.61□□□□□ -1.03
COL4A6-208ENST00000538570 ZP4Q12836 540 aa8.61□□□□□ -1.03
COL4A6-208ENST00000538570 CEACAM21Q3KPI0 293 aa8.61□□□□□ -1.03
COL4A6-208ENST00000538570 GCSAMQ8N6F7 178 aa8.61□□□□□ -1.03
COL4A6-208ENST00000538570 IGHV5-10-1A0A0J9YXX1 117 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 A0A1W2PPC1 479 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 A1L4Q6 167 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 LINC00869P0C866 280 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 TGIF1Q15583 401 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 C9orf40Q8IXQ3 194 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 OR52E5Q8NH55 327 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 EAF1Q96JC9 268 aaPredicted RBP8.6□□□□□ -1.03
COL4A6-208ENST00000538570 NRTNQ99748 197 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 RBKSQ9H477 322 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 MRPL16Q9NX20 251 aaKnown RBP8.6□□□□□ -1.03
COL4A6-208ENST00000538570 KLHDC2Q9Y2U9 406 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 RAXQ9Y2V3 346 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 RNASE1P07998 156 aaKnown RBP8.6□□□□□ -1.03
COL4A6-208ENST00000538570 GLIPR1P48060 266 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 GFRA1P56159 465 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 FGF12P61328 243 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 GAGE2BQ13066 116 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 GAGE2EQ4V326 116 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 TMEM252Q8N6L7 170 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 GAGE2DQ9UEU5 116 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 HLA-DRB1P01911 266 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 C1QAP02745 245 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 FSTP19883 344 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 MRAPQ8TCY5 172 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 TMEM45BQ96B21 275 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 CCL27Q9Y4X3 112 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 MGST3O14880 152 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 JOSD1Q15040 202 aaPredicted RBP8.6□□□□□ -1.03
COL4A6-208ENST00000538570 STPG3Q8N7X2 389 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 PGLYRP4Q96LB8 373 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 WDR54Q9H977 334 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 LPAR2Q9HBW0 351 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 ECM29Q5VYK3 1845 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 A0A1W2PPV9 198 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 RBFOX2O43251 390 aaKnown RBP eCLIP8.6□□□□□ -1.03
COL4A6-208ENST00000538570 C1QL1O75973 258 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 APOMO95445 188 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 RPS20P60866 119 aaKnown RBP8.6□□□□□ -1.03
COL4A6-208ENST00000538570 MEF2BQ02080 365 aaPredicted RBP8.6□□□□□ -1.03
COL4A6-208ENST00000538570 TMEM70Q9BUB7 260 aa8.6□□□□□ -1.03
COL4A6-208ENST00000538570 GRIFINA4D1Z8 144 aa8.59□□□□□ -1.03
COL4A6-208ENST00000538570 TMEM262E9PQX1 116 aa8.59□□□□□ -1.03
COL4A6-208ENST00000538570 OR2A4O95047 310 aa8.59□□□□□ -1.03
COL4A6-208ENST00000538570 NUBP1P53384 320 aa8.59□□□□□ -1.03
COL4A6-208ENST00000538570 NANOS3P60323 173 aaKnown RBP8.59□□□□□ -1.03
COL4A6-208ENST00000538570 ZNF385AQ96PM9 386 aaKnown RBP8.59□□□□□ -1.03
COL4A6-208ENST00000538570 OR2A7Q96R45 310 aa8.59□□□□□ -1.03
COL4A6-208ENST00000538570 KCNE5Q9UJ90 142 aa8.59□□□□□ -1.03
COL4A6-208ENST00000538570 DSPPQ9NZW4 1301 aa8.59□□□□□ -1.03
COL4A6-208ENST00000538570 TRAV8-4A0A0B4J246 113 aa8.59□□□□□ -1.03
COL4A6-208ENST00000538570 WNT9BO14905 357 aa8.59□□□□□ -1.03
COL4A6-208ENST00000538570 CIRBPQ14011 172 aaKnown RBP8.59□□□□□ -1.03
COL4A6-208ENST00000538570 TMEM249Q2WGJ8 235 aa8.59□□□□□ -1.03
COL4A6-208ENST00000538570 ZNF721Q8TF20 911 aa8.59□□□□□ -1.03
COL4A6-208ENST00000538570 TMEM171Q8WVE6 324 aa8.59□□□□□ -1.03
COL4A6-208ENST00000538570 TMEM222Q9H0R3 208 aa8.59□□□□□ -1.03
COL4A6-208ENST00000538570 BEX4Q9NWD9 120 aaPredicted RBP8.59□□□□□ -1.03
COL4A6-208ENST00000538570 SF3B6Q9Y3B4 125 aaKnown RBP8.59□□□□□ -1.03
COL4A6-208ENST00000538570 PGPA6NDG6 321 aa8.59□□□□□ -1.03
COL4A6-208ENST00000538570 FAM106CPP0CH98 169 aa8.59□□□□□ -1.03
COL4A6-208ENST00000538570 GPR6P46095 362 aaPredicted RBP8.59□□□□□ -1.03
COL4A6-208ENST00000538570 ID4P47928 161 aa8.59□□□□□ -1.03
COL4A6-208ENST00000538570 OR8G5Q8NG78 346 aa8.59□□□□□ -1.03
COL4A6-208ENST00000538570 WNT10AQ9GZT5 417 aa8.59□□□□□ -1.03
COL4A6-208ENST00000538570 PRDM14Q9GZV8 571 aa8.59□□□□□ -1.03
COL4A6-208ENST00000538570 TMEM56-RWDD3S4R434 201 aa8.59□□□□□ -1.03
COL4A6-208ENST00000538570 PTPRZ1P23471 2315 aaPredicted RBP8.59□□□□□ -1.03
COL4A6-208ENST00000538570 HOXA5P20719 270 aa8.59□□□□□ -1.03
COL4A6-208ENST00000538570 C2orf83Q53S99 150 aa8.59□□□□□ -1.03
COL4A6-208ENST00000538570 ZPLD1Q8TCW7 415 aa8.59□□□□□ -1.03
COL4A6-208ENST00000538570 GEMIN7Q9H840 131 aaKnown RBP8.59□□□□□ -1.03
COL4A6-208ENST00000538570 YBX2Q9Y2T7 364 aaKnown RBP8.59□□□□□ -1.03
COL4A6-208ENST00000538570 MRPS16Q9Y3D3 137 aaKnown RBP8.59□□□□□ -1.03
COL4A6-208ENST00000538570 KRTCAP3Q53RY4 240 aa8.59□□□□□ -1.03
COL4A6-208ENST00000538570 FAM27BQ5VT28 67 aa8.59□□□□□ -1.03
COL4A6-208ENST00000538570 PQLC2Q6ZP29 291 aa8.59□□□□□ -1.03
COL4A6-208ENST00000538570 TTTY12Q9BZ98 90 aa8.59□□□□□ -1.03
COL4A6-208ENST00000538570 CACNA1CQ13936 2221 aa8.58□□□□□ -1.04
COL4A6-208ENST00000538570 FTH1P19P0C7X4 201 aa8.58□□□□□ -1.04
COL4A6-208ENST00000538570 PSG9Q00887 426 aa8.58□□□□□ -1.04
COL4A6-208ENST00000538570 RTN4RL2Q86UN3 420 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 172.9 ms